lineage | Count |
---|---|
lineage3.1.2.1 | 2 |
lineage4.1.2.1 | 4 |
lineage4.6.4 | 33 |
lineage4.2.2 | 2 |
lineage4.4.1.1 | 2 |
lineage1.2.1.1 | 1 |
lineage3 | 29 |
lineage1.1.2 | 6 |
lineage1.1.1.1 | 3 |
lineage4.2.1 | 1 |
lineage2.2.2 | 3 |
lineage4.5 | 1 |
lineage4.2.2.1 | 2 |
lineage1.1.1 | 1 |
lineage2.1 | 1 |
lineage2.2.1 | 2 |
lineage4.8 | 1 |
lineage4.9 | 1 |
lineage6.3.1 | 1 |
lineage4.1.1.1 | 1 |
lineage4.1.1.3 | 1 |
spoligotype | Count |
---|---|
None | 98 |
ID | Drug resistance | Lineage | Country iso2 | ERR688029 | Pre-XDR-TB | lineage3.1.2.1 | None | ERR4813892 | Sensitive | lineage4.1.2.1 | br | ERR9119540 | MDR-TB | lineage4.6.4 | None | SRR21798465 | HR-TB | lineage4.2.2 | None | ERR8773531 | HR-TB | lineage4.4.1.1 | None | ERR9119482 | MDR-TB | lineage4.6.4 | None | ERR9119508 | MDR-TB | lineage4.6.4 | None | SRR21732135 | Sensitive | lineage1.2.1.1 | None | ERR8773533 | HR-TB | lineage4.4.1.1 | None | ERR9119481 | MDR-TB | lineage4.6.4 | None | ERR9119537 | MDR-TB | lineage4.6.4 | None | ERR9119528 | MDR-TB | lineage4.6.4 | None | ERR9119564 | MDR-TB | lineage4.6.4 | None | ERR9119563 | MDR-TB | lineage4.6.4 | None | ERR9119572 | MDR-TB | lineage4.6.4 | None | ERR9119566 | MDR-TB | lineage4.6.4 | None | ERR9119587 | MDR-TB | lineage4.6.4 | None | ERR9119594 | MDR-TB | lineage4.6.4 | None | ERR9119585 | MDR-TB | lineage4.6.4 | None | SRR1172861 | MDR-TB | lineage3 | None | ERR9119610 | MDR-TB | lineage4.6.4 | None | ERR9119601 | MDR-TB | lineage4.6.4 | None | SRR1173367 | MDR-TB | lineage3 | None | SRR1173014 | MDR-TB | lineage3 | None | SRR1173105 | MDR-TB | lineage3 | None | SRR1172938 | MDR-TB | lineage3 | None | SRR1173031 | Sensitive | lineage1.1.2 | None | SRR1173136 | Sensitive | lineage1.1.2 | None | SRR16089622 | Sensitive | lineage1.1.1.1 | None | SRR1173686 | MDR-TB | lineage3 | None | SRR1173727 | MDR-TB | lineage3 | None | SRR1175105 | MDR-TB | lineage3 | None | SRR1173621 | MDR-TB | lineage3 | None | SRR1175151 | MDR-TB | lineage3 | None | SRR16089837 | Sensitive | lineage1.1.1.1 | None | SRR27450138 | Sensitive | lineage3 | None | ERR11081370 | MDR-TB | lineage4.2.1 | None | SRR21887643 | MDR-TB | lineage2.2.2 | None | SRR21747055 | MDR-TB | lineage4.5 | None | SRR25515185 | MDR-TB | lineage2.2.2 | None | SRR26399227 | HR-TB | lineage1.1.1.1 | None | SRR3082090 | MDR-TB | lineage1.1.2 | None | SRR25827512 | MDR-TB | lineage3 | None | SRR25827599 | Pre-XDR-TB | lineage3 | None | SAMN02599090 | MDR-TB | lineage3 | None | ERR3014604 | MDR-TB | lineage4.1.2.1 | tn | SRR6045523 | MDR-TB | lineage3 | gb | ERR1034597 | Pre-XDR-TB | lineage3.1.2.1 | pk | SRR6044856 | MDR-TB | lineage3 | gb | SAMN02599131 | MDR-TB | lineage3 | None | SRR8380901 | Sensitive | lineage1.1.2 | in | ERR2041729 | Pre-XDR-TB | lineage4.2.2.1 | rs | DRR184614 | Sensitive | lineage1.1.1 | vn | ERR3275774 | MDR-TB | lineage4.2.2 | nl | ERR3276064 | Pre-XDR-TB | lineage4.1.2.1 | nl | SRR5818615 | MDR-TB | lineage1.1.2 | dj | SAMN02599089 | MDR-TB | lineage3 | None | SAMN02599130 | MDR-TB | lineage3 | None | ERR2514124 | Sensitive | lineage2.1 | None | SRR5067697 | HR-TB | lineage2.2.1 | vn | DRR185073 | Sensitive | lineage2.2.2 | vn | ERR2516575 | MDR-TB | lineage4.2.2.1 | None | ERR2707101 | MDR-TB | lineage4.6.4 | cd | SAMN02599061 | MDR-TB | lineage3 | None | ERR4796458 | MDR-TB | lineage3 | in | ERR4827521 | HR-TB | lineage4.8 | None | ERR4797747 | Pre-XDR-TB | lineage3 | in | SAMN02599114 | Sensitive | lineage1.1.2 | in | ERR4799597 | MDR-TB | lineage3 | in | ERR4798131 | HR-TB | lineage3 | in | ERR4799048 | Sensitive | lineage3 | in | ERR4797370 | Pre-XDR-TB | lineage3 | in | ERR4872102 | MDR-TB | lineage4.6.4 | None | ERR4817732 | Sensitive | lineage3 | gb | ERR4872075 | MDR-TB | lineage4.6.4 | None | ERR4800253 | MDR-TB | lineage3 | in | ERR4872076 | MDR-TB | lineage4.6.4 | None | ERR4872131 | MDR-TB | lineage4.6.4 | None | ERR4872122 | MDR-TB | lineage4.6.4 | None | ERR4872134 | MDR-TB | lineage4.6.4 | None | ERR4872166 | MDR-TB | lineage4.6.4 | None | ERR4872161 | MDR-TB | lineage4.6.4 | None | ERR4872164 | MDR-TB | lineage4.6.4 | None | ERR4872207 | MDR-TB | lineage4.6.4 | None | ERR4872174 | MDR-TB | lineage4.6.4 | None | ERR4872187 | MDR-TB | lineage4.6.4 | None | ERR4872189 | MDR-TB | lineage4.6.4 | None | ERR4872196 | MDR-TB | lineage4.6.4 | None | SRR9738553 | MDR-TB | lineage4.1.2.1 | None | ERR4872216 | MDR-TB | lineage4.6.4 | None | SRR9940971 | Other | lineage4.9 | None | ERR11043759 | MDR-TB | lineage4.6.4 | None | ERR11049067 | Sensitive | lineage3 | None | SRR998625 | Sensitive | lineage6.3.1 | None | ERR2515950 | MDR-TB | lineage4.1.1.1 | za | ERR3639747 | MDR-TB | lineage4.6.4 | None | ERR2515663 | RR-TB | lineage4.1.1.3 | za | SRR16088046 | Sensitive | lineage2.2.1 | None |
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