lineage | Count |
---|---|
lineage1.1.1.1 | 3 |
lineage1.1.2 | 101 |
lineage4.1.1.3 | 10 |
lineage3 | 1 |
lineage1.2.1.2.1 | 2 |
lineage4.1.2 | 2 |
lineage4.4.1.2 | 1 |
lineage2.2.1 | 7 |
lineage1.1.2;lineage3.1.2 | 1 |
lineage1.1.2;lineage2.2.1 | 1 |
lineage4.1.2.1 | 1 |
lineage5 | 3 |
lineage1.1.2;lineage3 | 1 |
lineage1.1.2;lineage1.2.2.2 | 1 |
lineage4.9 | 1 |
spoligotype | Count |
---|---|
None | 136 |
ID | Drug resistance | Lineage | Country iso2 | ERR9119415 | Sensitive | lineage1.1.1.1 | None | ERR4798387 | Other | lineage1.1.2 | in | SRR29230673 | HR-TB | lineage1.1.2 | None | ERR4796663 | HR-TB | lineage1.1.2 | in | SRR22137395 | Sensitive | lineage1.1.2 | None | ERR2510147 | HR-TB | lineage4.1.1.3 | pe | SRR28393746 | MDR-TB | lineage4.1.1.3 | None | ERR2516643 | MDR-TB | lineage3 | nl | SRR2100949 | Sensitive | lineage1.1.2 | None | SAMN02599099 | HR-TB | lineage1.1.2 | in | ERR3256109 | Other | lineage1.2.1.2.1 | ph | ERR13276076 | Other | lineage4.1.2 | None | ERR4800530 | MDR-TB | lineage1.1.2 | in | SRR29230667 | HR-TB | lineage1.1.2 | None | ERR4799563 | Pre-XDR-TB | lineage1.1.2 | in | SRR1175155 | HR-TB | lineage1.1.2 | None | ERR4799956 | HR-TB | lineage1.1.2 | in | SRR16058374 | Sensitive | lineage1.1.2 | None | ERR4797133 | MDR-TB | lineage1.1.2 | in | ERR117703 | Sensitive | lineage1.1.2 | None | ERR2517103 | MDR-TB | lineage1.1.2 | gb | SRR1172881 | Sensitive | lineage1.1.2 | None | ERR11067256 | Sensitive | lineage1.1.2 | None | ERR4798652 | Sensitive | lineage1.1.2 | in | ERR4820275 | HR-TB | lineage4.4.1.2 | gb | SRR21659026 | Sensitive | lineage2.2.1 | None | ERR2510144 | HR-TB | lineage4.1.1.3 | pe | ERR779859 | HR-TB | lineage4.1.1.3 | pe | ERR2510213 | HR-TB | lineage4.1.1.3 | pe | SRR29231412 | RR-TB | lineage1.1.2 | None | ERR4831007 | Pre-XDR-TB | lineage1.1.2 | np | SRR29230867 | Sensitive | lineage1.1.2 | None | ERR13273265 | Other | lineage4.1.2 | None | ERR4553822 | MDR-TB | lineage1.1.2 | None | ERR4796369 | MDR-TB | lineage1.1.2 | None | ERR2510222 | HR-TB | lineage4.1.1.3 | pe | SRR25827695 | MDR-TB | lineage1.1.2;lineage3.1.2 | None | ERR4797476 | Sensitive | lineage1.1.2 | in | SRR28045709 | Other | lineage1.1.2 | None | SRR28046148 | Sensitive | lineage1.1.2 | None | SRR29772383 | MDR-TB | lineage1.1.2 | None | SRR29772547 | MDR-TB | lineage1.1.2 | None | SRR29772530 | MDR-TB | lineage1.1.2 | None | SRR26056427 | Sensitive | lineage1.1.2 | None | ERR2516801 | MDR-TB | lineage1.1.2;lineage2.2.1 | gb | SRR28045852 | HR-TB | lineage1.1.2 | None | SRR29230886 | Sensitive | lineage1.1.2 | None | ERR4799981 | Sensitive | lineage1.1.2 | None | ERR5908194 | Sensitive | lineage1.1.2 | None | SRR12882615 | Sensitive | lineage1.1.2 | None | ERR4800385 | MDR-TB | lineage1.1.2 | None | ERR4797073 | Sensitive | lineage1.1.2 | in | SRR29017110 | MDR-TB | lineage1.1.2 | None | SRR29231433 | Sensitive | lineage1.1.2 | None | ERR13261369 | Sensitive | lineage1.1.2 | None | SRR21663291 | Sensitive | lineage2.2.1 | None | SRR2100169 | Sensitive | lineage1.1.2 | None | ERR4796357 | HR-TB | lineage1.1.2 | in | ERR775343 | HR-TB | lineage4.1.1.3 | pe | ERR4817991 | Sensitive | lineage1.1.2 | None | ERR9125658 | Sensitive | lineage1.1.2 | None | SRR28045052 | Sensitive | lineage1.1.2 | None | ERR2513085 | HR-TB | lineage1.1.2 | gb | ERR9285796 | Sensitive | lineage4.1.2.1 | None | ERR123932 | Sensitive | lineage1.1.2 | None | SRR1175036 | Sensitive | lineage1.1.2 | None | SRR1172942 | HR-TB | lineage1.1.2 | None | SRR6152837 | Sensitive | lineage1.2.1.2.1 | ca | ERR702416 | Sensitive | lineage5 | gh | ERR4813561 | HR-TB | lineage4.1.1.3 | None | ERR4830450 | Sensitive | lineage1.1.1.1 | vn | ERR4798716 | Sensitive | lineage1.1.2 | in | ERR4799013 | HR-TB | lineage1.1.2;lineage3 | in | ERR4799889 | Sensitive | lineage1.1.2;lineage1.2.2.2 | in | SRR28044783 | Sensitive | lineage1.1.2 | None | SRR28045712 | Other | lineage1.1.2 | None | SRR28044410 | MDR-TB | lineage1.1.2 | None | SRR28046369 | Other | lineage1.1.2 | None | SRR28044781 | Sensitive | lineage1.1.2 | None | SRR29772630 | MDR-TB | lineage1.1.2 | None | ERR4796362 | Sensitive | lineage1.1.2 | in | ERR9119127 | Sensitive | lineage1.1.2 | None | ERR4799930 | Pre-XDR-TB | lineage1.1.2 | in | ERR775312 | HR-TB | lineage4.1.1.3 | pe | SRR28409427 | Sensitive | lineage1.1.2 | None | ERR4798821 | Sensitive | lineage1.1.2 | in | SRR21685379 | Sensitive | lineage2.2.1 | None | SRR22250067 | HR-TB | lineage1.1.2 | None | SRR7070409 | Sensitive | lineage1.1.2 | None | SRR28045018 | Sensitive | lineage1.1.2 | None | ERR4797603 | Sensitive | lineage1.1.2 | in | ERR4798178 | HR-TB | lineage1.1.2 | in | ERR13291502 | Sensitive | lineage2.2.1 | None | ERR4796759 | Sensitive | lineage1.1.2 | in | SRR2101014 | Sensitive | lineage1.1.2 | None | ERR2516941 | MDR-TB | lineage1.1.2 | gb | ERR4799376 | Sensitive | lineage1.1.2 | in | ERR13291658 | Sensitive | lineage1.1.2 | None | ERR4821310 | Other | lineage5 | None | ERR4800039 | MDR-TB | lineage1.1.2 | in | ERR4799273 | Sensitive | lineage1.1.2 | in | ERR751505 | HR-TB | lineage4.1.1.3 | pe | SAMN02599138 | Sensitive | lineage1.1.2 | in | ERR4797414 | HR-TB | lineage1.1.2 | in | ERR4797198 | Sensitive | lineage1.1.2 | in | SRR18911582 | Sensitive | lineage2.2.1 | None | ERR4816967 | Other | lineage5 | None | ERR4800257 | Sensitive | lineage1.1.2 | None | ERR278568 | Sensitive | lineage1.1.2 | None | ERR2514689 | Sensitive | lineage1.1.2 | gb | SRR28045713 | Other | lineage1.1.2 | None | ERR4797758 | Pre-XDR-TB | lineage1.1.2 | in | ERR2514594 | Sensitive | lineage1.1.2 | gb | SRR29055743 | Sensitive | lineage2.2.1 | None | SRR26399291 | Sensitive | lineage1.1.1.1 | None | ERR294212 | Sensitive | lineage1.1.2 | None | ERR4798492 | Sensitive | lineage1.1.2 | in | ERR4797028 | Pre-XDR-TB | lineage1.1.2 | in | ERR4798435 | Sensitive | lineage1.1.2 | in | ERR4797411 | Sensitive | lineage1.1.2 | in | SRR29538992 | HR-TB | lineage4.9 | None | SRR28045598 | Sensitive | lineage1.1.2 | None | SRR28044296 | Sensitive | lineage1.1.2 | None | SRR28044505 | Sensitive | lineage1.1.2 | None | SRR24799219 | Sensitive | lineage2.2.1 | None | SRR28858385 | Sensitive | lineage1.1.2 | None | SRR2100263 | Sensitive | lineage1.1.2 | None | ERR4796644 | Sensitive | lineage1.1.2 | in | ERR4797075 | HR-TB | lineage1.1.2 | in | ERR4797404 | Sensitive | lineage1.1.2 | in | ERR13261518 | Sensitive | lineage1.1.2 | None | ERR4821912 | Sensitive | lineage1.1.2 | None | ERR386927 | Sensitive | lineage1.1.2 | None | ERR4797627 | Sensitive | lineage1.1.2 | in | ERR4797990 | Sensitive | lineage1.1.2 | in | ERR4798478 | HR-TB | lineage1.1.2 | in |
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