lineage | Count |
---|---|
lineage1.2.1.2.1 | 2 |
lineage3.1.1 | 2 |
lineage1.1.3.1 | 1 |
lineage4.9 | 23 |
lineage1.1.1.1 | 6 |
lineage4.6.1.1 | 7 |
lineage4.1.2.1 | 3 |
lineage4.3.2 | 2 |
lineage1.2.1.2 | 1 |
lineage2.2.1;lineage3 | 1 |
lineage4.5 | 1 |
lineage4.3.4.2 | 1 |
lineage3 | 1 |
spoligotype | Count |
---|---|
None | 51 |
ID | Drug resistance | Lineage | Country iso2 | ERR551898 | Sensitive | lineage1.2.1.2.1 | de | ERR3275708 | HR-TB | lineage3.1.1 | nl | SRR11662263 | MDR-TB | lineage1.1.3.1 | None | ERR4553990 | Pre-XDR-TB | lineage4.9 | None | ERR4553791 | MDR-TB | lineage4.9 | None | ERR4553637 | Pre-XDR-TB | lineage4.9 | None | ERR4831822 | HR-TB | lineage1.1.1.1 | vn | SRR29017259 | Pre-XDR-TB | lineage4.9 | None | SRR1049719 | Sensitive | lineage4.6.1.1 | None | SRR1140576 | Sensitive | lineage4.6.1.1 | None | ERR13439874 | HR-TB | lineage1.1.1.1 | None | ERR4831835 | HR-TB | lineage1.1.1.1 | vn | SRR29017650 | Pre-XDR-TB | lineage4.9 | None | ERR6865505 | Sensitive | lineage4.1.2.1 | None | SRR29017429 | MDR-TB | lineage4.9 | None | SRR4423137 | Pre-XDR-TB | lineage4.9 | None | SRR6797537 | MDR-TB | lineage4.9 | None | SRR1049720 | Sensitive | lineage4.6.1.1 | None | ERR4553985 | MDR-TB | lineage4.9 | None | ERR4553641 | MDR-TB | lineage4.9 | None | ERR4553668 | Pre-XDR-TB | lineage4.9 | None | SRR5067328 | HR-TB | lineage1.1.1.1 | vn | SRR13591341 | Sensitive | lineage4.3.2 | None | SRR22251904 | Sensitive | lineage1.2.1.2.1 | None | ERR4831888 | HR-TB | lineage1.1.1.1 | vn | SRR22250257 | Sensitive | lineage1.2.1.2 | None | SRR29016887 | Pre-XDR-TB | lineage4.9 | None | ERR4553650 | Pre-XDR-TB | lineage4.9 | None | SRR1062925 | Sensitive | lineage4.6.1.1 | None | SAMN02381035 | Sensitive | lineage4.6.1.1 | None | SRR29017203 | MDR-TB | lineage4.9 | None | SRR25827661 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR4553624 | MDR-TB | lineage4.9 | None | SRR29016824 | MDR-TB | lineage4.9 | None | ERR4024937 | Sensitive | lineage4.1.2.1 | None | SRR13591401 | Sensitive | lineage4.3.2 | None | SRR29016826 | MDR-TB | lineage4.9 | None | SRR1140595 | Sensitive | lineage4.6.1.1 | None | ERR2513862 | Sensitive | lineage4.9 | None | SRR21277141 | Sensitive | lineage4.5 | None | SRR28394035 | MDR-TB | lineage4.3.4.2 | None | ERR2653021 | Other | lineage4.1.2.1 | None | SRR26400014 | Sensitive | lineage3.1.1 | None | SRR29017703 | MDR-TB | lineage4.9 | None | ERR13439890 | HR-TB | lineage1.1.1.1 | None | SRR1062926 | Sensitive | lineage4.6.1.1 | None | ERR4553799 | MDR-TB | lineage4.9 | None | SRR4423142 | Pre-XDR-TB | lineage4.9 | None | SRR25827808 | Sensitive | lineage3 | None | ERR4553456 | MDR-TB | lineage4.9 | None | SRR29017062 | MDR-TB | lineage4.9 | None |
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