lineage | Count |
---|---|
lineage1.1.2 | 2 |
lineage1.2.2.2 | 2 |
lineage4.1.2.1 | 13 |
lineage2.2.2 | 2 |
lineage4.2.1.1 | 4 |
lineage3.1.1 | 2 |
lineage3 | 5 |
lineage4.1 | 2 |
lineage4.5 | 4 |
lineage4.8 | 2 |
lineage4.9 | 3 |
lineage4.3.3 | 2 |
lineage4.3.4.2 | 1 |
lineage4.1.1 | 2 |
lineage4.1.2 | 1 |
lineage4.2.2.2 | 1 |
lineage3.1.2 | 1 |
spoligotype | Count |
---|---|
None | 49 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
SRR28046028 | Sensitive | lineage1.1.2 | None |
ERR13289888 | Other | lineage1.2.2.2 | None |
SRR20139554 | HR-TB | lineage4.1.2.1 | None |
SRR29385419 | MDR-TB | lineage2.2.2 | None |
SRR20139570 | HR-TB | lineage4.1.2.1 | None |
ERR13275930 | HR-TB | lineage4.2.1.1 | None |
ERR2503449 | Sensitive | lineage3.1.1 | None |
SRR28045449 | Pre-XDR-TB | lineage3 | None |
ERR11081047 | Pre-XDR-TB | lineage4.1 | None |
SRR23691417 | Pre-XDR-TB | lineage4.5 | None |
ERR4814438 | HR-TB | lineage4.1.2.1 | gb |
SRR29356739 | HR-TB | lineage4.1.2.1 | None |
SRR20139562 | RR-TB | lineage4.8 | None |
ERR4829714 | HR-TB | lineage4.5 | it |
SRR28044688 | XDR-TB | lineage3 | None |
SRR29385422 | MDR-TB | lineage2.2.2 | None |
ERR13260088 | RR-TB | lineage4.1.2.1 | None |
SRR22424911 | HR-TB | lineage3 | None |
SRR10147705 | MDR-TB | lineage3 | None |
SRR20139571 | HR-TB | lineage4.1.2.1 | None |
SRR6485022 | Pre-XDR-TB | lineage4.2.1.1 | None |
ERR2517111 | MDR-TB | lineage4.1.2.1 | gb |
SRR18213689 | HR-TB | lineage4.9 | None |
ERR270675 | HR-TB | lineage4.9 | None |
SRR20139556 | HR-TB | lineage4.1.2.1 | None |
ERR11082467 | RR-TB | lineage4.3.3 | None |
SRR30180277 | MDR-TB | lineage4.5 | None |
ERR4818825 | HR-TB | lineage4.1.2.1 | None |
ERR2245389 | Sensitive | lineage3.1.1 | no |
ERR13284535 | RR-TB | lineage4.3.3 | None |
SRR21746996 | MDR-TB | lineage4.5 | None |
SRR20139555 | HR-TB | lineage4.1.2.1 | None |
SRR25395685 | HR-TB | lineage4.1.2.1 | None |
SRR6832053 | Sensitive | lineage4.2.1.1 | None |
ERR3287474 | HR-TB | lineage4.3.4.2 | pe |
ERR13285008 | Pre-XDR-TB | lineage4.1 | None |
SRR28409302 | Sensitive | lineage4.2.1.1 | None |
SRR20139559 | HR-TB | lineage4.1.2.1 | None |
SRR2099966 | HR-TB | lineage4.9 | None |
SRR6046624 | Other | lineage1.2.2.2 | gb |
ERR13110315 | HR-TB | lineage4.1.1 | None |
SRR28858524 | MDR-TB | lineage4.1.1 | None |
ERR9786514 | Sensitive | lineage4.1.2 | None |
ERR4830760 | MDR-TB | lineage3 | ir |
SRR28044876 | HR-TB | lineage4.2.2.2 | None |
SRR22424944 | MDR-TB | lineage3.1.2 | None |
SRR28409397 | HR-TB | lineage4.8 | None |
SRR9613556 | MDR-TB | lineage4.1.2.1 | None |
ERR9030463 | MDR-TB | lineage1.1.2 | None |