lineage | Count |
---|---|
lineage3.1.1 | 2 |
lineage4.3.3 | 2 |
lineage4.1.2.1 | 12 |
lineage3 | 5 |
lineage4.9 | 2 |
lineage4.2.1.1 | 3 |
lineage1.2.2.2 | 2 |
lineage4.1 | 1 |
lineage4.5 | 4 |
lineage4.1.1 | 2 |
lineage4.8 | 2 |
lineage3.1.2 | 1 |
lineage1.1.2 | 2 |
lineage2.2.2 | 1 |
lineage4.1.2 | 1 |
lineage4.2.2.2 | 1 |
lineage4.3.4.2 | 1 |
spoligotype | Count |
---|---|
None | 44 |
ID | Drug resistance | Lineage | Country iso2 | ERR2503449 | Sensitive | lineage3.1.1 | None | ERR11082467 | RR-TB | lineage4.3.3 | None | SRR29356739 | HR-TB | lineage4.1.2.1 | None | ERR13284535 | RR-TB | lineage4.3.3 | None | ERR4830760 | MDR-TB | lineage3 | ir | ERR270675 | HR-TB | lineage4.9 | None | SRR20139555 | HR-TB | lineage4.1.2.1 | None | SRR22424911 | HR-TB | lineage3 | None | SRR25395685 | HR-TB | lineage4.1.2.1 | None | SRR6832053 | Sensitive | lineage4.2.1.1 | None | SRR20139571 | HR-TB | lineage4.1.2.1 | None | ERR13289888 | Other | lineage1.2.2.2 | None | SRR20139554 | HR-TB | lineage4.1.2.1 | None | SRR20139570 | HR-TB | lineage4.1.2.1 | None | SRR20139559 | HR-TB | lineage4.1.2.1 | None | ERR11081047 | Pre-XDR-TB | lineage4.1 | None | SRR23691417 | Pre-XDR-TB | lineage4.5 | None | ERR4814438 | HR-TB | lineage4.1.2.1 | gb | ERR13110315 | HR-TB | lineage4.1.1 | None | SRR30180277 | MDR-TB | lineage4.5 | None | SRR28858524 | MDR-TB | lineage4.1.1 | None | ERR4818825 | HR-TB | lineage4.1.2.1 | None | SRR20139562 | RR-TB | lineage4.8 | None | SRR18213689 | HR-TB | lineage4.9 | None | ERR2245389 | Sensitive | lineage3.1.1 | no | SRR22424944 | MDR-TB | lineage3.1.2 | None | SRR21746996 | MDR-TB | lineage4.5 | None | SRR9613556 | MDR-TB | lineage4.1.2.1 | None | SRR28044688 | XDR-TB | lineage3 | None | ERR9030463 | MDR-TB | lineage1.1.2 | None | ERR2517111 | MDR-TB | lineage4.1.2.1 | gb | SRR20139556 | HR-TB | lineage4.1.2.1 | None | SRR28045449 | Pre-XDR-TB | lineage3 | None | SRR6046624 | Other | lineage1.2.2.2 | gb | SRR29385422 | MDR-TB | lineage2.2.2 | None | ERR4829714 | HR-TB | lineage4.5 | it | ERR9786514 | Sensitive | lineage4.1.2 | None | SRR28044876 | HR-TB | lineage4.2.2.2 | None | SRR28409397 | HR-TB | lineage4.8 | None | SRR10147705 | MDR-TB | lineage3 | None | SRR28046028 | Sensitive | lineage1.1.2 | None | ERR3287474 | HR-TB | lineage4.3.4.2 | pe | SRR6485022 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR28409302 | Sensitive | lineage4.2.1.1 | None |
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