EBG00000313325 - n.-199G>A


Drug resistance types
62 Sensitive 2 RR-TB 15 HR-TB 28 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 1 Other
lineage Counts
lineage Count
lineage3.1.3 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage4 21
lineage3 17
lineage1.1.3.1 11
lineage2.2.1;lineage4.2.1.1 1
lineage2.2.1 8
lineage1.2.2.1 3
lineage4.9 1
lineage4.2.2 6
lineage4.2.1.1 16
lineage5 1
lineage2.2.1;lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.2.1;lineage4.3.3 1
lineage4.5 2
lineage2.1;lineage4.9 1
lineage1.2.2.2 1
lineage1.1.3 1
lineage4.2.2.2 3
lineage4.1.1.3 1
lineage2.2.2 2
lineage2.2.1.1 2
lineage1.1.1 1
lineage4.8 1
lineage4.3.4.1 1
lineage1.1.1.1 1
lineage4.2.1;lineage4.3.3 1
lineage4.3.3 2
lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 111
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28045208 Sensitive lineage3.1.3 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SAMEA5569750 MDR-TB lineage4 None
SRR28045724 Sensitive lineage3 None
ERR3287597 MDR-TB lineage4 pe
SRR18911906 Sensitive lineage1.1.3.1 None
ERR4818804 Sensitive lineage1.1.3.1 None
SRR18715185 HR-TB lineage2.2.1;lineage4.2.1.1 None
ERR4799362 Pre-XDR-TB lineage2.2.1 in
SRR18911920 Sensitive lineage3 None
ERR2660548 Sensitive lineage1.2.2.1 None
ERR8975622 Sensitive lineage4.9 None
ERR4811253 Sensitive lineage4.2.2 cn
SRR21674640 Sensitive lineage3 None
SRR29053230 Sensitive lineage1.1.3.1 None
ERR13289561 Sensitive lineage3 None
ERR3284107 MDR-TB lineage2.2.1 None
ERR13292369 Sensitive lineage3 None
ERR3287721 MDR-TB lineage4 pe
SRR18714809 Sensitive lineage4.2.1.1 None
ERR12117938 MDR-TB lineage4 None
ERR439985 Sensitive lineage5 None
ERR13291601 Sensitive lineage1.1.3.1 None
ERR4810906 Sensitive lineage4.2.2 cn
SRR30182584 HR-TB lineage3 None
ERR13292365 Sensitive lineage1.1.3.1 None
ERR4813750 HR-TB lineage2.2.1;lineage4.1.2 br
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR2179568 Sensitive lineage4.2.2 cn
ERR7363047 HR-TB lineage2.2.1;lineage4.3.3 None
ERR3287557 MDR-TB lineage4 None
SRR28858605 MDR-TB lineage4 None
SRR26800455 HR-TB lineage3 None
SRR18714998 HR-TB lineage4.2.1.1 None
SRR21686100 Sensitive lineage1.1.3.1 None
ERR4813793 HR-TB lineage2.2.1 br
ERR9029870 MDR-TB lineage4 None
ERR4457861 MDR-TB lineage4 None
ERR4811258 Sensitive lineage4.2.2 cn
ERR11243472 Sensitive lineage4.2.1.1 None
SRR28393423 MDR-TB lineage4 None
ERR3287558 MDR-TB lineage4 None
SRR21747055 MDR-TB lineage4.5 None
SRR5341333 Other lineage2.1;lineage4.9 None
SRR29096400 Sensitive lineage3 None
ERR13266165 Pre-XDR-TB lineage1.2.2.2 None
SRR1724006 Sensitive lineage4.2.2 cn
SAMEA5569751 MDR-TB lineage4 None
SRR26056411 Sensitive lineage1.1.3 None
ERR2514824 Sensitive lineage4.2.2.2 None
ERR4818552 Sensitive lineage1.1.3.1 gb
SRR23861848 Sensitive lineage4.2.1.1 None
SRR28239787 HR-TB lineage4.2.1.1 None
ERR4813925 HR-TB lineage2.2.1 br
SRR26800466 HR-TB lineage3 None
ERR3148171 MDR-TB lineage4.1.1.3 mx
ERR751447 MDR-TB lineage4 pe
SRR19325553 Sensitive lineage1.1.3.1 None
SRR25515483 Sensitive lineage2.2.2 None
SRR15315741 Sensitive lineage2.2.1.1 None
ERR3275694 RR-TB lineage1.1.3.1 nl
SRR15316083 Sensitive lineage2.2.1.1 None
ERR11049543 Sensitive lineage4.2.1.1 None
ERR11081320 Sensitive lineage3 None
ERR4024944 MDR-TB lineage4 None
ERR2446523 RR-TB lineage1.1.3.1 nl
ERR751732 Sensitive lineage1.1.1 th
SRR3743458 Sensitive lineage4.8 None
SRR11033658 HR-TB lineage4.2.1.1 None
SRR28240172 Sensitive lineage4.2.1.1 None
SRR26112433 Sensitive lineage4.3.4.1 None
ERR2660470 Sensitive lineage1.2.2.1 None
SRR21677057 Sensitive lineage3 None
SRR18715016 Sensitive lineage4.2.1.1 None
SRR18715301 Sensitive lineage4.2.1.1 None
SRR25206912 MDR-TB lineage2.2.2 None
ERR4813779 HR-TB lineage2.2.1 br
SRR22251122 Sensitive lineage1.1.1.1 None
SRR10397253 HR-TB lineage4.2.1;lineage4.3.3 None
ERR11044005 Sensitive lineage3 None
ERR4822554 Sensitive lineage4.3.3 ua
ERR2510373 MDR-TB lineage4.2.2.2 pk
SRR1002697 Sensitive lineage4.2.1.1 None
ERR11043838 Sensitive lineage4.2.2.2 None
SRR6257063 Sensitive lineage4.2.1.1 None
ERR9029844 MDR-TB lineage4 None
SRR23861985 Sensitive lineage4.2.1.1 None
SRR6832205 Sensitive lineage4.2.1.1 None
SRR21240054 Sensitive lineage4.3.3 None
SRR21689987 Sensitive lineage2.2.1 None
ERR7821216 Sensitive lineage1.2.2.1 None
ERR3287555 MDR-TB lineage4 None
SRR29126909 Sensitive lineage4.1.2.1 None
ERR779883 MDR-TB lineage4 pe
ERR7910890 MDR-TB lineage4 None
SRR30180476 MDR-TB lineage4.5 None
SRR29052745 Sensitive lineage3 None
ERR12117965 MDR-TB lineage4 None
SRR6045992 Sensitive lineage3 None
ERR7910889 MDR-TB lineage4 None
ERR3287791 MDR-TB lineage4 pe
SRR21732771 Sensitive lineage3 None
SRR29053290 Sensitive lineage3 None
SRR6650129 Sensitive lineage1.1.3.1 None
SRR7585434 Pre-XDR-TB lineage3 in
SRR10305648 Sensitive lineage4.2.2 None
ERR4813929 HR-TB lineage2.2.1 None
SRR21747069 Sensitive lineage2.2.1 None
SRR23862074 Sensitive lineage4.2.1.1 None
SRR23862173 Sensitive lineage4.2.1.1 None
ERR4457776 MDR-TB lineage4 None