EBG00000313339 - n.1531C>G
Drug resistance types
8 Sensitive
11 RR-TB
7 HR-TB
4 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
46 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 6 |
| lineage4.1.1.3 | 3 |
| lineage4.3.3 | 5 |
| lineage4.8 | 7 |
| lineage1.1.3.1 | 2 |
| lineage5 | 1 |
| lineage4.1 | 1 |
| lineage4.6.5 | 1 |
| 4 | |
| lineage1.2.1.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.1.2.1 | 11 |
| lineage3 | 10 |
| lineage4.6 | 1 |
| lineage3.1.2.1 | 2 |
| lineage4.3.2 | 1 |
| lineage4 | 2 |
| lineage4;lineage3.1.2.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.9 | 13 |
| lineage4.4.1.2 | 1 |
| lineage1.2.2.2 | 2 |
| lineage4.2.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 84 |
Geographic prevalence
Country level data for this variant is available for 14 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18002933 | Other | lineage2.2.1 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR4815784 | Other | lineage2.2.1 | gb | ERR4814623 | Other | lineage4.8 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | ERR4814763 | Other | lineage2.2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814745 | Other | lineage4.6.5 | None | ERR4817131 | Pre-XDR-TB | None | ERR4816068 | HR-TB | lineage1.2.1.1 | gb | ERR4815990 | HR-TB | lineage4.6.2.2 | None | ERR4816782 | Other | lineage4.1.2.1 | None | ERR4816561 | Sensitive | lineage3 | gb | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816699 | Other | lineage4.6 | None | ERR4817194 | Other | lineage4.1.2.1 | None | ERR4819166 | Other | lineage3 | gb | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR4818691 | Other | lineage4.8 | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR2513298 | Other | lineage4.8 | gb | ERR4819002 | HR-TB | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818272 | Other | lineage4.3.2 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4819192 | Other | lineage3 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR4819324 | Other | lineage4.8 | gb | ERR4820720 | Other | lineage4.1.2.1 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4819377 | Other | lineage4;lineage3.1.2.1 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819497 | Sensitive | lineage4.4.1.2 | gb | ERR2514261 | Other | lineage3 | None | ERR4819641 | HR-TB | lineage4.6.2.2 | None | ERR4820030 | Other | lineage4.9 | None | ERR2514409 | Sensitive | lineage3 | gb | ERR2514565 | Other | lineage3.1.2.1 | gb | ERR4819699 | HR-TB | lineage4.6.2.2 | gb | ERR4820820 | Other | lineage1.2.1.1 | gb | ERR4821828 | Other | lineage4.1.2.1 | gb | ERR4820151 | RR-TB | lineage4.8 | None | ERR4820075 | Other | lineage4.1.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR4821616 | Other | lineage1.1.3.1 | None | ERR4822114 | Other | lineage4.1.2.1 | None | ERR4821286 | Other | lineage4.8 | None | ERR4822170 | Other | lineage4.1.1.3 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6044784 | MDR-TB | lineage3 | None | SRR5818672 | Other | lineage1.2.2.2 | None | SRR6045379 | Other | None | SRR6045052 | HR-TB | lineage4.2.1.1 | None | SRR6046246 | Other | lineage3 | None | SRR6046250 | Other | lineage4.9 | None | ERR502479 | RR-TB | lineage4.9 | None | SRR6046442 | Other | lineage3 | None | SRR6046359 | Other | lineage4.7 | None | SRR6046601 | Sensitive | lineage1.2.2.2 | gb | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR10796596 | Other | lineage4.9 | None | ERR10796564 | Other | lineage4.3.3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | ERR10796636 | Other | lineage4.1.2.1 | None | ERR386849 | Sensitive | lineage4.1.1.3 | None | ERR10796598 | RR-TB | lineage4.9 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1173170 | Other | lineage4.9 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140736 | RR-TB | None | SRR1173385 | Sensitive | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173770 | Other | lineage4.9 | None | SRR1173740 | Other | None |
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