Rv0001 - c.939C>A


Drug resistance types
93 Sensitive 2 RR-TB 22 HR-TB 24 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 3 Other
lineage Counts
lineage Count
lineage1.2.1.2.1 118
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
lineage4.8 11
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.2.1.2.1;lineage2.2.1 1
1
M.canetti;lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage1.2.1.2.1;lineage4.9 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
M.canetti;lineage4.2 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 144
Geographic prevalence
Country level data for this variant is available for 39 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4829654 Sensitive lineage1.2.1.2.1 it
SRR6152932 HR-TB lineage1.2.1.2.1 ca
ERR4820893 Sensitive lineage1.2.1.2.1 gb
SRR6152767 HR-TB lineage1.2.1.2.1 ca
SRR5065503 Sensitive lineage1.2.1.2.1 vn
SRR12006614 Sensitive lineage1.2.1.2.1 None
SRR22249430 HR-TB lineage1.2.1.2.1 None
ERR133986 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
SRR28409440 Sensitive lineage1.2.1.2.1 None
SRR28409439 Sensitive lineage1.2.1.2.1 None
ERR11775978 MDR-TB lineage1.2.1.2.1 None
DRR130216 MDR-TB lineage1.2.1.2.1 None
DRR473816 HR-TB lineage1.2.1.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR11068908 MDR-TB lineage1.2.1.2.1 None
SRR21690415 Sensitive lineage4.8 None
SRR23316607 HR-TB lineage1.2.1.2.1 None
ERR6336689 Sensitive lineage1.2.1.2.1 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR21722105 MDR-TB lineage1.2.1.2.1 None
ERR11082400 Sensitive lineage4.8 None
DRR130067 MDR-TB lineage1.2.1.2.1 None
ERR7902771 HR-TB lineage1.2.1.2.1 None
SRR6152911 HR-TB lineage1.2.1.2.1 ca
ERR7902746 Sensitive lineage1.2.1.2.1 None
SRR12006575 Sensitive lineage1.2.1.2.1 None
SRR12006666 Sensitive lineage1.2.1.2.1 None
SRR16058170 Sensitive lineage1.2.1.2.1 None
SRR21732867 Sensitive lineage1.2.1.2.1 None
ERR3256274 Sensitive lineage1.2.1.2.1 ph
SRR19325523 Sensitive lineage1.2.1.2.1 None
SRR16058298 Sensitive lineage1.2.1.2.1 None
ERR3256235 MDR-TB lineage1.2.1.2.1 ph
ERR2517542 Sensitive lineage1.2.1.2.1 nl
ERR9125242 Sensitive lineage1.2.1.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR14520020 Sensitive lineage1.2.1.2.1 None
SRR24799273 Sensitive lineage1.2.1.2.1 None
SRR21657210 Sensitive lineage1.2.1.2.1 None
SRR6153139 Sensitive lineage1.2.1.2.1 ca
SRR12882514 MDR-TB lineage1.2.1.2.1 None
ERR4822367 MDR-TB lineage1.2.1.2.1 None
ERR9125874 Sensitive lineage1.2.1.2.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR6153087 HR-TB lineage1.2.1.2.1 ca
ERR3275212 Sensitive lineage1.2.1.2.1 nl
ERR552371 HR-TB lineage4.8 de
ERR4819067 Sensitive lineage1.2.1.2.1 None
SRR5341272 HR-TB lineage1.2.1.2.1 in
SRR6152779 Sensitive lineage1.2.1.2.1 ca
ERR3275187 Sensitive lineage1.2.1.2.1 nl
ERR502889 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR18213707 Sensitive lineage1.2.1.2.1 None
SRR6152669 Sensitive lineage1.2.1.2.1 ca
ERR6336785 Sensitive lineage1.2.1.2.1 None
DRR130148 MDR-TB lineage1.2.1.2.1 None
SRR3724763 Sensitive lineage1.2.1.2.1;lineage2.2.1 None
SRR16100732 Other lineage1.2.1.2.1 None
SRR16058415 Sensitive lineage1.2.1.2.1 None
ERR4195822 Sensitive lineage4.8 None
ERR3256269 Sensitive lineage1.2.1.2.1 ph
ERR12860986 MDR-TB lineage1.2.1.2.1 None
SRR7496517 Other None
SRR28409411 HR-TB lineage1.2.1.2.1 None
SRR27450367 Sensitive lineage1.2.1.2.1 None
ERR4829559 Sensitive lineage1.2.1.2.1 it
ERR4820935 Sensitive lineage1.2.1.2.1 gb
ERR2517415 Sensitive lineage1.2.1.2.1 nl
ERR4819460 Sensitive lineage1.2.1.2.1 gb
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR21709849 Sensitive lineage1.2.1.2.1 None
SRR21733182 MDR-TB lineage1.2.1.2.1 None
ERR2446518 Sensitive lineage1.2.1.2.1 nl
SRR6152876 HR-TB lineage1.2.1.2.1 ca
ERR6336773 Sensitive lineage1.2.1.2.1 None
ERR11067941 MDR-TB lineage1.2.1.2.1 None
SRR24799282 Sensitive lineage1.2.1.2.1 None
SRR21733276 Sensitive lineage1.2.1.2.1 None
ERR2446470 Sensitive lineage1.2.1.2.1 nl
SRR22249434 Sensitive lineage1.2.1.2.1 None
SRR12882525 HR-TB lineage1.2.1.2.1 None
ERR4816497 HR-TB lineage1.2.1.2.1 None
ERR11050629 Sensitive lineage1.2.1.2.1 None
ERR9125386 Sensitive lineage1.2.1.2.1 None
SRR22251404 Sensitive lineage1.2.1.2.1 None
ERR5311079 MDR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR16058496 Sensitive lineage1.2.1.2.1 None
ERR4821965 Sensitive lineage4.8 None
SRR22249618 Sensitive lineage1.2.1.2.1 None
SRR11972198 Sensitive lineage1.2.1.2.1;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR2100635 Sensitive lineage1.2.1.2.1 None
ERR7902610 HR-TB lineage1.2.1.2.1 None
SRR6152825 Sensitive lineage1.2.1.2.1 ca
SRR21690771 HR-TB lineage1.2.1.2.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR6152649 Sensitive lineage1.2.1.2.1 ca
ERR4195343 Sensitive lineage4.8 None
ERR11082085 Sensitive lineage4.8 None
SRR26112286 HR-TB lineage1.2.1.2.1 None
SRR28409727 Sensitive lineage1.2.1.2.1 None
SRR28375413 Sensitive lineage1.2.1.2.1 None
SRR16058458 Sensitive lineage1.2.1.2.1 None
SRR22251078 Sensitive lineage1.2.1.2.1 None
SRR6152766 Other lineage1.2.1.2.1 ca
SRR6152903 Sensitive lineage1.2.1.2.1 ca
ERR9121124 Sensitive lineage4.8 None
ERR228282 Sensitive lineage1.2.1.2.1 None
ERR2512915 Sensitive lineage1.2.1.2.1 gb
ERR4816434 Sensitive lineage1.2.1.2.1 gb
SRR6152992 HR-TB lineage1.2.1.2.1 ca
SRR21732435 Sensitive lineage1.2.1.2.1 None
SRR6153188 Sensitive lineage1.2.1.2.1 ca
SRR5709997 Sensitive lineage1.2.1.2.1 th
SRR16370319 Sensitive lineage1.2.1.2.1 None
SRR6397987 Sensitive lineage1.2.1.2.1 ca
SRR21732368 Sensitive lineage1.2.1.2.1 None
ERR3275987 HR-TB lineage1.2.1.2.1 nl
SRR3675586 RR-TB M.canetti;lineage4.6.4;lineage4.9 None
ERR6336737 Sensitive lineage1.2.1.2.1 None
ERR278576 Sensitive lineage1.2.1.2.1 None
ERR9121419 Sensitive lineage4.8 None
ERR3256248 Sensitive lineage1.2.1.2.1 ph
SRR21728342 Sensitive lineage1.2.1.2.1 None
ERR4816708 Sensitive lineage1.2.1.2.1 None
ERR9125296 Sensitive lineage1.2.1.2.1 None
ERR6336721 Sensitive lineage1.2.1.2.1 None
SRR26112402 Sensitive lineage1.2.1.2.1 None
DRR188845 Sensitive lineage1.2.1.2.1 None
ERR10465778 HR-TB lineage1.2.1.2.1 None
SRR14519720 Sensitive lineage1.2.1.2.1 None
ERR386935 Sensitive lineage1.2.1.2.1 None
SRR21733379 HR-TB lineage1.2.1.2.1 None
ERR12544121 Sensitive lineage4.8 None
ERR2514600 Sensitive lineage1.2.1.2.1 gb
SRR28170769 Sensitive lineage1.2.1.2.1 None
ERR4819673 MDR-TB lineage1.2.1.2.1 gb
SRR5341418 MDR-TB La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR11081871 MDR-TB lineage4.8 None
ERR7902643 Sensitive lineage1.2.1.2.1 None
SRR7070306 HR-TB lineage1.2.1.2.1 None
ERR9125717 Sensitive lineage1.2.1.2.1 None
SRR2100957 Sensitive lineage1.2.1.2.1 None
ERR11044510 Sensitive lineage1.2.1.2.1 None