Rv0005 - c.-164_-163insT
Drug resistance types
165 Sensitive
1 RR-TB
26 HR-TB
90 MDR-TB
10 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.2.2.2 | 75 |
| lineage2.2.1 | 46 |
| lineage1.1.2 | 40 |
| lineage4.1.2 | 13 |
| lineage3.1.1 | 63 |
| La1.7.1 | 9 |
| lineage4.3.4.2 | 7 |
| lineage4.3.3 | 9 |
| lineage1.1.3 | 2 |
| lineage4.8 | 5 |
| lineage3 | 9 |
| lineage4.6.2.2 | 3 |
| lineage1.1.1 | 25 |
| lineage4.4.2 | 2 |
| lineage4 | 3 |
| lineage4.5 | 2 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 6 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 6 |
| lineage4.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.7 | 1 |
| lineage1.2.2 | 1 |
| lineage1.1.2;lineage3 | 1 |
| lineage1.1.1.1 | 2 |
| lineage1.1.3.3 | 1 |
| lineage4.3.4.1 | 3 |
| lineage2.2.1.1 | 1 |
| lineage6.2.2 | 1 |
| lineage2.2.2 | 2 |
| lineage4.2.2 | 1 |
| lineage4.3.3;lineage4.8 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage1.1.2;lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 352 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11081535 | MDR-TB | lineage4.2.2.2 | None | SRR15368938 | Sensitive | lineage2.2.1 | None | ERR036186 | Sensitive | lineage2.2.1 | mw | ERR4799981 | Sensitive | lineage1.1.2 | None | ERR13290535 | MDR-TB | lineage4.2.2.2 | None | ERR13388700 | Sensitive | lineage4.1.2 | None | ERR4820669 | Other | lineage3.1.1 | None | ERR212104 | Sensitive | lineage2.2.1 | mw | ERR5908194 | Sensitive | lineage1.1.2 | None | SRR1165450 | MDR-TB | lineage4.2.2.2 | None | SRR1166827 | MDR-TB | lineage4.2.2.2 | None | ERR3275892 | Other | La1.7.1 | nl | ERR4819874 | HR-TB | lineage4.3.4.2 | None | ERR4812964 | MDR-TB | lineage4.3.3 | pe | ERR3275979 | Other | La1.7.1 | nl | ERR4553481 | MDR-TB | lineage1.1.3 | None | ERR13276307 | MDR-TB | lineage4.2.2.2 | None | ERR11043127 | MDR-TB | lineage4.2.2.2 | None | SRR1166822 | MDR-TB | lineage4.2.2.2 | None | SRR1167113 | MDR-TB | lineage4.2.2.2 | None | ERR11044611 | Other | lineage3.1.1 | None | ERR1063891 | Sensitive | lineage2.2.1 | None | ERR1063838 | Sensitive | lineage2.2.1 | None | ERR4798387 | Other | lineage1.1.2 | in | SRR1165590 | MDR-TB | lineage4.2.2.2 | None | ERR4818910 | MDR-TB | lineage4.2.2.2 | gb | ERR12796625 | MDR-TB | lineage4.2.2.2 | None | SRR12882708 | Sensitive | lineage3.1.1 | None | ERR4797073 | Sensitive | lineage1.1.2 | in | SRR1165473 | MDR-TB | lineage4.2.2.2 | None | ERR9119239 | Other | lineage4.8 | None | ERR10225395 | Other | lineage3.1.1 | None | ERR9030525 | HR-TB | lineage3.1.1 | None | SRR12882017 | Sensitive | lineage3.1.1 | None | ERR3639766 | MDR-TB | lineage4.2.2.2 | None | ERR2245392 | Sensitive | lineage3.1.1 | no | ERR2245394 | Sensitive | lineage3.1.1 | no | ERR2515617 | Sensitive | lineage2.2.1 | za | ERR13292495 | Sensitive | lineage3 | None | ERR2517158 | Other | lineage3.1.1 | nl | ERR4796663 | HR-TB | lineage1.1.2 | in | ERR4798178 | HR-TB | lineage1.1.2 | in | ERR11044490 | Sensitive | lineage4.6.2.2 | None | SRR1165427 | MDR-TB | lineage4.2.2.2 | None | SRR1166722 | MDR-TB | lineage4.2.2.2 | None | SRR26399670 | HR-TB | lineage1.1.1 | None | SRR1162861 | MDR-TB | lineage4.2.2.2 | None | SRR10808617 | Sensitive | lineage4.4.2 | None | ERR4820175 | MDR-TB | lineage4.2.2.2 | gb | ERR2517407 | Other | lineage3.1.1 | nl | SRR21732507 | Sensitive | lineage3 | None | ERR4811957 | Sensitive | lineage4 | pe | ERR216951 | Sensitive | lineage2.2.1 | None | SRR1165554 | MDR-TB | lineage4.2.2.2 | None | ERR4796759 | Sensitive | lineage1.1.2 | in | ERR181722 | Sensitive | lineage2.2.1 | mw | SRR12882262 | Sensitive | lineage3.1.1 | None | SRR1162708 | MDR-TB | lineage4.2.2.2 | None | ERR4815418 | HR-TB | lineage4.3.4.2 | gb | ERR2245291 | Sensitive | lineage3.1.1 | no | ERR4816069 | Sensitive | lineage3.1.1 | gb | SRR21690313 | Other | lineage3.1.1 | None | SRR21277049 | Sensitive | lineage4.5 | None | SRR21691135 | Other | La1.7.1 | None | ERR11775896 | Sensitive | lineage3.1.1 | None | ERR176794 | Sensitive | lineage2.2.1 | mw | ERR3275614 | Other | lineage3.1.1 | nl | SRR1162822 | MDR-TB | lineage4.2.2.2 | None | ERR4800039 | MDR-TB | lineage1.1.2 | in | ERR4831325 | MDR-TB | lineage4.2.2.2 | de | ERR4799273 | Sensitive | lineage1.1.2 | in | SRR21691010 | Other | La1.7.1 | None | ERR4800530 | MDR-TB | lineage1.1.2 | in | SRR1167124 | MDR-TB | lineage4.2.2.2 | None | SRR7070628 | Sensitive | lineage4.1.1.3 | None | ERR4814636 | Other | lineage3.1.1 | None | SRR22251092 | Sensitive | lineage2.2.1 | None | SAMN02414961 | MDR-TB | lineage4.2.2.2 | se | ERR036235 | Sensitive | lineage2.2.1 | mw | ERR181870 | Sensitive | lineage2.2.1 | mw | ERR4799563 | Pre-XDR-TB | lineage1.1.2 | in | ERR221635 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR2446105 | Other | lineage3.1.1 | nl | ERR2517441 | Sensitive | lineage3.1.1 | nl | SRR22179508 | Other | lineage3.1.1 | None | SRR10809053 | Sensitive | lineage4.1.2.1 | None | SRR26400047 | Other | lineage1.1.1 | None | ERR2843443 | Sensitive | lineage1.1.1 | None | ERR4797198 | Sensitive | lineage1.1.2 | in | ERR736858 | Sensitive | lineage3.1.1 | None | ERR13262199 | Other | lineage3.1.1 | None | ERR13290529 | MDR-TB | lineage4.2.2.2 | None | ERR037551 | Sensitive | lineage2.2.1 | mw | ERR117703 | Sensitive | lineage1.1.2 | None | ERR2245350 | Sensitive | lineage3.1.1 | no | SAMN02414883 | MDR-TB | lineage4.2.2.2 | se | ERR1034739 | HR-TB | lineage4.3.3 | pe | ERR760920 | MDR-TB | lineage4.1.2.1.1 | ar | ERR11044478 | Sensitive | lineage4.6.2.2 | None | SAMN02414974 | MDR-TB | lineage4.2.2.2 | se | ERR9286141 | Sensitive | lineage3.1.1 | None | ERR751609 | MDR-TB | lineage4.3.3 | pe | SRR1165431 | MDR-TB | lineage4.2.2.2 | None | SRR25515366 | Pre-XDR-TB | lineage2.2.1 | None | ERR4816278 | Sensitive | lineage4.3.4.2.1 | None | SRR1144731 | MDR-TB | lineage4.2.2.2 | None | SRR29050750 | Sensitive | lineage1.1.1 | None | SRR1165532 | MDR-TB | lineage4.2.2.2 | None | SRR22250061 | Other | lineage3 | None | SRR26399302 | Sensitive | lineage1.1.1 | None | ERR4828171 | Other | lineage1.1.1 | vn | ERR176759 | Sensitive | lineage2.2.1 | mw | ERR2245395 | Other | lineage3.1.1 | no | ERR221631 | Sensitive | lineage2.2.1 | mw | ERR11043730 | MDR-TB | lineage4.2.2.2 | None | ERR13284115 | MDR-TB | lineage4.2.2.2 | None | SRR6045462 | Sensitive | lineage1.1.2 | None | SRR10808967 | Sensitive | lineage4.3 | None | SRR1166828 | MDR-TB | lineage4.2.2.2 | None | ERR2514594 | Sensitive | lineage1.1.2 | gb | ERR2513151 | Sensitive | lineage4.3.4.2.1 | gb | ERR11067287 | Sensitive | lineage3.1.1 | None | ERR3275697 | Sensitive | lineage4.1.2 | nl | SAMN02414941 | MDR-TB | lineage4.2.2.2 | se | ERR3275481 | Other | lineage3.1.1 | nl | ERR2245297 | Sensitive | lineage3.1.1 | no | ERR9285819 | Sensitive | lineage4.1.2 | None | ERR2446296 | Sensitive | lineage3.1.1 | nl | SAMN02414971 | MDR-TB | lineage4.2.2.2 | se | SRR29056148 | MDR-TB | lineage4.4.1.1 | None | SRR29230867 | Sensitive | lineage1.1.2 | None | ERR2513087 | Sensitive | lineage4.1.1.3 | gb | ERR4830315 | HR-TB | lineage1.1.1 | vn | SRR2100968 | Sensitive | lineage4.1.2 | None | ERR4798492 | Sensitive | lineage1.1.2 | in | ERR4797028 | Pre-XDR-TB | lineage1.1.2 | in | ERR040093 | Sensitive | lineage3.1.1 | gb | ERR1034999 | Pre-XDR-TB | lineage4.7 | za | ERR4816168 | MDR-TB | lineage4.2.2.2 | None | ERR190363 | Sensitive | lineage2.2.1 | mw | ERR212013 | Sensitive | lineage2.2.1 | mw | ERR4828168 | Other | lineage1.1.1 | vn | ERR2517419 | Other | lineage3.1.1 | nl | ERR4025066 | Sensitive | lineage4 | None | ERR11043367 | Sensitive | lineage4.1.2.1 | None | ERR11081900 | MDR-TB | lineage4.2.2.2 | None | ERR4816993 | Other | lineage4.3.4.2.1 | None | SRR25515089 | Other | lineage2.2.1 | None | ERR181891 | Sensitive | lineage2.2.1 | mw | SRR13180212 | MDR-TB | lineage4.2.2.2 | None | SRR29126404 | MDR-TB | lineage4.2.2.2 | None | SRR1146313 | MDR-TB | lineage4.2.2.2 | None | ERR2245424 | Sensitive | lineage3.1.1 | no | ERR2446364 | Other | lineage3.1.1 | nl | SRR7069200 | Sensitive | lineage4.1.1.3 | None | SRR22179506 | Other | lineage3.1.1 | None | ERR5865526 | MDR-TB | lineage4.1.2.1 | None | SRR22249947 | Sensitive | lineage1.2.2 | None | ERR4798716 | Sensitive | lineage1.1.2 | in | ERR4799013 | HR-TB | lineage1.1.2;lineage3 | in | SAMN02414957 | MDR-TB | lineage4.2.2.2 | se | ERR4814357 | Other | lineage3.1.1 | None | ERR4797476 | Sensitive | lineage1.1.2 | in | SRR21733338 | Sensitive | lineage3 | None | ERR4829385 | MDR-TB | lineage4.2.2.2 | it | SRR28045668 | Other | lineage3 | None | SRR21733070 | Sensitive | lineage1.1.1 | None | ERR11773785 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290602 | MDR-TB | lineage4.2.2.2 | None | ERR13290604 | MDR-TB | lineage4.2.2.2 | None | SRR29356646 | Sensitive | lineage4.1.2 | None | SRR18213777 | MDR-TB | lineage4.2.2.2 | None | SRR5073899 | HR-TB | lineage1.1.1.1 | vn | ERR11044037 | MDR-TB | lineage4.2.2.2 | None | ERR11049193 | MDR-TB | lineage4.2.2.2 | None | ERR13283330 | MDR-TB | lineage4.2.2.2 | None | ERR176641 | Sensitive | lineage2.2.1 | mw | ERR245660 | Sensitive | lineage2.2.1 | mw | SRR1166933 | MDR-TB | lineage4.2.2.2 | None | SRR15014619 | Pre-XDR-TB | lineage3 | None | SRR21690810 | Other | La1.7.1 | None | ERR13290528 | MDR-TB | lineage4.2.2.2 | None | ERR176718 | Sensitive | lineage2.2.1 | None | ERR13290527 | MDR-TB | lineage4.2.2.2 | None | ERR4797627 | Sensitive | lineage1.1.2 | in | ERR11049153 | Sensitive | lineage3.1.1 | None | SRR6797574 | Sensitive | lineage1.1.3.3 | None | SRR5341433 | Other | lineage3 | in | ERR4797990 | Sensitive | lineage1.1.2 | in | ERR4832056 | HR-TB | lineage1.1.1 | None | SRR29051113 | Other | lineage1.1.1 | None | ERR13266777 | Other | lineage3.1.1 | None | ERR4800385 | MDR-TB | lineage1.1.2 | None | ERR9119287 | HR-TB | lineage1.1.1 | None | SAMN02414944 | MDR-TB | lineage4.2.2.2 | se | ERR386956 | Sensitive | lineage4.1.2 | None | SRR18914231 | Sensitive | lineage3 | None | SRR1163223 | MDR-TB | lineage4.2.2.2 | None | ERR4830185 | Other | lineage4.8 | vn | SRR1167128 | MDR-TB | lineage4.2.2.2 | None | SRR1162893 | MDR-TB | lineage4.2.2.2 | None | ERR4820742 | Sensitive | lineage4.3.4.2.1 | None | SRR28860144 | Sensitive | lineage4.3.3 | None | ERR2446068 | Sensitive | lineage4.1.2 | nl | ERR190386 | Sensitive | lineage2.2.1 | mw | ERR736805 | Sensitive | lineage2.2.1 | None | ERR4797603 | Sensitive | lineage1.1.2 | in | SRR15399219 | HR-TB | lineage4.3.4.2 | None | ERR4457794 | Sensitive | lineage4 | None | ERR4818587 | Sensitive | lineage3.1.1 | gb | ERR2503360 | Sensitive | lineage3.1.1 | None | ERR1035230 | Sensitive | lineage4.3.4.1 | pt | SRR6152755 | HR-TB | lineage2.2.1.1 | ca | ERR4821693 | Sensitive | lineage4.3.3 | None | ERR4828392 | Sensitive | lineage1.1.1 | vn | ERR10680008 | MDR-TB | lineage6.2.2 | None | ERR9286091 | Sensitive | lineage4.4.1.1 | None | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR221524 | Sensitive | lineage2.2.1 | mw | ERR216956 | Sensitive | lineage2.2.1 | None | SAMN02414884 | MDR-TB | lineage4.2.2.2 | se | SRR1162847 | MDR-TB | lineage4.2.2.2 | None | SRR1163168 | MDR-TB | lineage4.2.2.2 | None | SRR24083602 | Other | lineage1.1.1 | None | SRR21277127 | Other | lineage2.2.2 | None | SRR7517721 | RR-TB | lineage4.2.2.2 | None | SRR21732325 | Sensitive | lineage1.1.1 | None | ERR11067592 | Other | lineage3.1.1 | None | SRR26399214 | Other | lineage4.8 | None | ERR9285874 | Sensitive | lineage4.1.2 | None | ERR4821845 | Sensitive | lineage4.3.3 | None | ERR13276372 | MDR-TB | lineage4.2.2.2 | None | ERR13290526 | MDR-TB | lineage4.2.2.2 | None | ERR2677397 | MDR-TB | lineage4.2.2.2 | de | ERR4596897 | MDR-TB | lineage3.1.1 | None | ERR4796357 | HR-TB | lineage1.1.2 | in | SRR22461647 | HR-TB | lineage4.3.3 | None | ERR13290616 | MDR-TB | lineage4.2.2.2 | None | ERR13290603 | MDR-TB | lineage4.2.2.2 | None | ERR1035320 | MDR-TB | lineage4.3.4.2 | br | ERR2446234 | Other | lineage3.1.1 | nl | ERR3323721 | MDR-TB | lineage4.2.2.2 | None | ERR5865527 | MDR-TB | lineage4.1.2.1 | None | ERR4797414 | HR-TB | lineage1.1.2 | in | ERR4814756 | Other | lineage3.1.1 | None | ERR2514262 | Sensitive | lineage4.8 | gb | ERR4799956 | HR-TB | lineage1.1.2 | in | ERR3275616 | Other | lineage3.1.1 | nl | ERR2843444 | Sensitive | lineage1.1.1 | None | SRR26399849 | Other | lineage1.1.1 | None | ERR4828204 | Sensitive | lineage1.1.1 | vn | ERR11044941 | Other | lineage3.1.1 | None | ERR13276229 | MDR-TB | lineage4.2.2.2 | None | SRR6855735 | Sensitive | lineage2.2.1 | None | ERR13290615 | MDR-TB | lineage4.2.2.2 | None | SRR28673990 | Other | La1.7.1 | None | ERR2446430 | Sensitive | lineage3.1.1 | nl | ERR181905 | Sensitive | lineage2.2.1 | mw | SRR14801750 | Sensitive | lineage4.3.3 | None | ERR2513917 | Sensitive | lineage4.1.2 | gb | DRR184661 | HR-TB | lineage4.2.2 | vn | ERR221628 | Sensitive | lineage2.2.1 | mw | ERR4821480 | Sensitive | lineage4.1.2 | gb | SRR6650380 | Sensitive | lineage4.3.4.2 | None | ERR181960 | Sensitive | lineage2.2.1 | mw | ERR212037 | Sensitive | lineage2.2.1 | mw | ERR2446390 | Other | lineage3.1.1 | nl | ERR718418 | Sensitive | lineage1.1.1 | th | ERR278597 | Sensitive | lineage4.1.2 | None | ERR3275218 | Sensitive | lineage3.1.1 | nl | ERR9285947 | Sensitive | lineage4.3.4.2 | None | SRR5067315 | Other | lineage1.1.1 | vn | ERR5917988 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR13180274 | Other | La1.7.1 | None | ERR221630 | Sensitive | lineage2.2.1 | mw | SRR1165580 | MDR-TB | lineage4.2.2.2 | None | ERR8975488 | Sensitive | lineage2.2.1 | None | SRR9971218 | Sensitive | lineage2.2.1 | None | SRR21658556 | Sensitive | lineage4.3.3;lineage4.8 | None | SRR24799301 | Sensitive | lineage3 | None | ERR3275643 | Other | lineage3.1.1 | nl | ERR3276025 | Other | La1.7.1 | nl | ERR4816299 | MDR-TB | lineage4.2.2.2 | None | ERR4815025 | Sensitive | lineage4.3.4.2.1 | None | ERR5979451 | Sensitive | lineage3.1.1 | None | ERR11044350 | Sensitive | lineage4.6.2.2 | None | ERR245783 | Sensitive | lineage2.2.1 | mw | SRR5073988 | Other | lineage1.1.1 | vn | SRR29539246 | Sensitive | lineage4.1.2.1 | None | ERR4797758 | Pre-XDR-TB | lineage1.1.2 | in | ERR1063845 | Sensitive | lineage2.2.1 | None | ERR181965 | Sensitive | lineage2.2.1 | mw | ERR040086 | Sensitive | lineage3.1.1 | gb | ERR275213 | Sensitive | lineage4.3.4.1 | pt | SRR7517737 | MDR-TB | lineage4.2.2.2 | None | SRR12882500 | Sensitive | lineage3.1.1 | None | SRR6480630 | Sensitive | lineage4.1.2.1 | None | ERR11049068 | Other | lineage3.1.1 | None | ERR4796369 | MDR-TB | lineage1.1.2 | None | ERR176611 | Sensitive | lineage2.2.1;lineage4 | mw | SRR21277120 | Sensitive | lineage4.5 | None | ERR11044714 | Other | lineage3.1.1 | None | SRR24222965 | Sensitive | lineage4.1.2 | None | ERR2517331 | Sensitive | lineage3.1.1 | nl | ERR4820229 | Other | lineage3.1.1 | None | ERR4799889 | Sensitive | lineage1.1.2;lineage1.2.2.2 | in | ERR4828370 | Sensitive | lineage1.1.1 | vn | ERR7764323 | Sensitive | lineage4.3.4.1 | None | SRR12420296 | Sensitive | lineage2.2.1 | None | ERR1023342 | Sensitive | lineage4.1.2 | None | ERR11775895 | Sensitive | lineage3.1.1 | None | SRR28044668 | Sensitive | lineage1.1.3 | None | ERR176606 | Sensitive | lineage2.2.1 | mw | ERR181849 | Sensitive | lineage2.2.1;lineage4 | mw | SRR25515162 | Other | lineage2.2.1 | None | SRR25534151 | Sensitive | lineage2.2.1 | None | SRR1163351 | MDR-TB | lineage4.2.2.2 | None | SRR1163424 | MDR-TB | lineage4.2.2.2 | None | SRR29772547 | MDR-TB | lineage1.1.2 | None | ERR13265094 | Pre-XDR-TB | lineage2.2.2 | None | ERR1023349 | Sensitive | lineage3.1.1 | None | ERR3275217 | Sensitive | lineage3.1.1 | nl | ERR3287532 | HR-TB | lineage4.3.3 | None | ERR4796362 | Sensitive | lineage1.1.2 | in | ERR7737875 | MDR-TB | lineage4.2.2.2 | None | ERR4815115 | Other | lineage3.1.1 | None | SRR2100263 | Sensitive | lineage1.1.2 | None | ERR2517142 | Other | lineage3.1.1 | nl | SRR7070525 | Other | lineage4.3.4.2.1 | None | ERR11043163 | MDR-TB | lineage4.2.2.2 | None | SRR5065456 | HR-TB | lineage1.1.1 | vn | ERR4796644 | Sensitive | lineage1.1.2 | in | ERR4797075 | HR-TB | lineage1.1.2 | in | ERR2245290 | Other | lineage3.1.1 | no | ERR13290565 | MDR-TB | lineage4.2.2.2 | None | ERR9119127 | Sensitive | lineage1.1.2 | None | ERR221634 | Sensitive | lineage2.2.1 | mw | ERR4810530 | Sensitive | lineage4.4.2 | cn | SRR1165530 | MDR-TB | lineage4.2.2.2 | None | ERR216966 | Sensitive | lineage2.2.1 | None | SRR14807669 | Sensitive | lineage4.8 | None | SRR5073861 | HR-TB | lineage1.1.1.1 | vn | ERR4799930 | Pre-XDR-TB | lineage1.1.2 | in | SRR26399489 | Sensitive | lineage1.1.1 | None | ERR4820621 | HR-TB | lineage3.1.1 | gb | ERR4798821 | Sensitive | lineage1.1.2 | in | SRR11662202 | MDR-TB | lineage1.1.1 | None | ERR4818320 | HR-TB | lineage4.3.4.2 | gb | SRR29341596 | Other | La1.7.1 | None | SRR29772834 | HR-TB | lineage1.1.2 | None | SRR29230886 | Sensitive | lineage1.1.2 | None | SRR29231529 | Sensitive | lineage1.1.2 | None |
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