Rv0005 - c.492C>T
Drug resistance types
35 Sensitive
3 RR-TB
3 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
9 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 11 |
| lineage1.1.3.1 | 34 |
| La1.8.2 | 2 |
| lineage4.4.2 | 2 |
| lineage1.1.3.1;lineage4.7 | 2 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR18289195 | Sensitive | M.canetti | None | SRR29017450 | MDR-TB | lineage1.1.3.1 | None | SRR6650256 | Sensitive | lineage1.1.3.1 | None | ERR2815556 | Other | La1.8.2 | None | SRR6797808 | Sensitive | lineage1.1.3.1 | None | ERR230020 | Sensitive | lineage1.1.3.1 | None | ERR4553632 | MDR-TB | lineage1.1.3.1 | None | ERR551180 | Sensitive | M.canetti | None | SRR671740 | Pre-XDR-TB | lineage4.4.2 | cn | SRR2100648 | Sensitive | lineage1.1.3.1 | None | ERR4821381 | Sensitive | lineage1.1.3.1 | gb | ERR266121 | Sensitive | M.canetti | None | SRR6650185 | HR-TB | lineage1.1.3.1 | None | SRR12420816 | Pre-XDR-TB | lineage4.4.2 | None | SRR10522763 | Sensitive | M.canetti | None | SRR10522783 | Sensitive | M.canetti | None | SRR6650317 | Sensitive | lineage1.1.3.1 | None | SRR24061589 | Sensitive | lineage1.1.3.1 | None | SRR29017615 | MDR-TB | lineage1.1.3.1 | None | SRR6650128 | Sensitive | lineage1.1.3.1 | None | SRR6650208 | Sensitive | lineage1.1.3.1 | None | ERR551181 | Sensitive | M.canetti | None | ERR13267694 | Other | lineage1.1.3.1 | None | SRR6797753 | Sensitive | lineage1.1.3.1 | None | ERR3132183 | Sensitive | lineage1.1.3.1 | None | SRR29231568 | RR-TB | lineage1.1.3.1;lineage4.7 | None | SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None | SRR6797473 | Sensitive | lineage1.1.3.1 | None | ERR2706927 | RR-TB | lineage1.1.3.1;lineage4.7 | cd | SRR6797320 | Sensitive | lineage1.1.3.1 | None | ERR266122 | Sensitive | La3;M.canetti | None | SRR22249774 | Sensitive | lineage1.1.3.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6650194 | Sensitive | lineage1.1.3.1 | None | SRR6797489 | Sensitive | lineage1.1.3.1 | None | SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR551179 | Sensitive | M.canetti | None | ERR9891993 | Other | lineage1.1.3.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR6797768 | Sensitive | lineage1.1.3.1 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | SRR28045666 | Sensitive | lineage1.1.3.1 | None | SRR7070310 | Other | lineage1.1.3.1 | None | SRR29016842 | MDR-TB | lineage1.1.3.1 | None | ERR7902629 | Other | lineage1.1.3.1 | None | ERR4814294 | Sensitive | lineage1.1.3.1 | gb | ERR4818927 | Sensitive | lineage1.1.3.1 | gb | SRR24061597 | Sensitive | M.canetti | None | ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | ERR4553587 | HR-TB | lineage1.1.3.1 | None | SRR14270077 | Sensitive | lineage1.1.3.1 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR1336822 | Sensitive | M.canetti | None | SRR6650304 | Sensitive | lineage1.1.3.1 | None | ERR3597004 | Sensitive | M.canetti | None | ERR551182 | Sensitive | M.canetti | None | ERR11067864 | Other | La1.8.2 | None | SRR21736374 | Sensitive | lineage1.1.3.1 | None | ERR4553843 | HR-TB | lineage1.1.3.1 | None |
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