Rv0005 - c.492C>T
Drug resistance types
34 Sensitive
3 RR-TB
3 HR-TB
7 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.4.2 | 2 |
| lineage1.1.3.1 | 34 |
| M.canetti | 11 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.8.2 | 2 |
| lineage1.1.3.1;lineage4.7 | 2 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| La3;M.canetti | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 59 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR671740 | Pre-XDR-TB | lineage4.4.2 | cn |
| ERR7902629 | Other | lineage1.1.3.1 | None |
| SRR10522763 | Sensitive | M.canetti | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR6650304 | Sensitive | lineage1.1.3.1 | None |
| ERR11067864 | Other | La1.8.2 | None |
| SRR18289195 | Sensitive | M.canetti | None |
| SRR29017450 | MDR-TB | lineage1.1.3.1 | None |
| SRR6650208 | Sensitive | lineage1.1.3.1 | None |
| ERR13267694 | Other | lineage1.1.3.1 | None |
| SRR6797753 | Sensitive | lineage1.1.3.1 | None |
| ERR2815556 | Other | La1.8.2 | None |
| ERR4553632 | MDR-TB | lineage1.1.3.1 | None |
| ERR3132183 | Sensitive | lineage1.1.3.1 | None |
| ERR551182 | Sensitive | M.canetti | None |
| SRR29231568 | RR-TB | lineage1.1.3.1;lineage4.7 | None |
| SRR7070310 | Other | lineage1.1.3.1 | None |
| SRR29016842 | MDR-TB | lineage1.1.3.1 | None |
| SRR6797473 | Sensitive | lineage1.1.3.1 | None |
| ERR551180 | Sensitive | M.canetti | None |
| ERR2706927 | RR-TB | lineage1.1.3.1;lineage4.7 | cd |
| ERR266121 | Sensitive | M.canetti | None |
| SRR24061597 | Sensitive | M.canetti | None |
| SRR6797320 | Sensitive | lineage1.1.3.1 | None |
| ERR551179 | Sensitive | M.canetti | None |
| ERR3597004 | Sensitive | M.canetti | None |
| SRR12420816 | Pre-XDR-TB | lineage4.4.2 | None |
| SRR3675550 | RR-TB | M.canetti;lineage4.2;lineage4.9 | None |
| ERR9891993 | Other | lineage1.1.3.1 | None |
| ERR4553843 | HR-TB | lineage1.1.3.1 | None |
| SRR6650317 | Sensitive | lineage1.1.3.1 | None |
| SRR29017615 | MDR-TB | lineage1.1.3.1 | None |
| ERR4814294 | Sensitive | lineage1.1.3.1 | gb |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR6650256 | Sensitive | lineage1.1.3.1 | None |
| SRR6797768 | Sensitive | lineage1.1.3.1 | None |
| SRR6797808 | Sensitive | lineage1.1.3.1 | None |
| ERR230020 | Sensitive | lineage1.1.3.1 | None |
| SRR28045666 | Sensitive | lineage1.1.3.1 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| SRR2100648 | Sensitive | lineage1.1.3.1 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| ERR266122 | Sensitive | La3;M.canetti | None |
| ERR4553587 | HR-TB | lineage1.1.3.1 | None |
| SRR6650185 | HR-TB | lineage1.1.3.1 | None |
| ERR1336822 | Sensitive | M.canetti | None |
| SRR14270077 | Sensitive | lineage1.1.3.1 | None |
| SRR22249774 | Sensitive | lineage1.1.3.1 | None |
| SRR6650194 | Sensitive | lineage1.1.3.1 | None |
| SRR6797489 | Sensitive | lineage1.1.3.1 | None |
| SRR24061589 | Sensitive | lineage1.1.3.1 | None |
| SRR10522783 | Sensitive | M.canetti | None |
| ERR4818927 | Sensitive | lineage1.1.3.1 | gb |
| ERR4821381 | Other | lineage1.1.3.1 | gb |
| SRR6650128 | Sensitive | lineage1.1.3.1 | None |
| SRR21736374 | Sensitive | lineage1.1.3.1 | None |
| ERR551181 | Sensitive | M.canetti | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
