Rv0005 - c.93C>T
Drug resistance types
27 Sensitive
0 RR-TB
17 HR-TB
5 MDR-TB
17 Pre-XDR-TB
3 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 24 |
| lineage4.9 | 22 |
| 12 | |
| lineage4 | 4 |
| lineage2.2.1 | 3 |
| lineage4.3 | 2 |
| La1.8.1 | 1 |
| lineage4.8;lineage2.2.1 | 2 |
| lineage1.2.1.2.1 | 1 |
| La3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage4.8;lineage3.1.2;lineage2.2.1;lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 77 |
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR8003011 | MDR-TB | lineage4.8 | in | ERR4818710 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | SRR5341373 | HR-TB | lineage4 | None | SRR6045233 | HR-TB | None | ERR4827671 | HR-TB | lineage2.2.1 | None | SRR6046225 | HR-TB | None | ERR4797800 | MDR-TB | lineage4.8 | in | ERR4798828 | Pre-XDR-TB | lineage4.8 | in | ERR4798833 | Pre-XDR-TB | lineage4.8 | in | ERR4798091 | MDR-TB | lineage4.8 | in | ERR4799796 | XDR-TB | lineage4.8 | in | ERR4799867 | Pre-XDR-TB | lineage4.8 | in | ERR4798005 | Pre-XDR-TB | lineage4.8 | in | ERR2516611 | Sensitive | lineage4.3 | pe | ERR4798043 | MDR-TB | lineage4.8 | in | ERR4796946 | MDR-TB | lineage4.8 | in | ERR4796864 | Pre-XDR-TB | lineage4.8 | in | ERR4796969 | Pre-XDR-TB | lineage4.8 | in | SRR6650192 | Sensitive | lineage4 | None | ERR4799300 | Pre-XDR-TB | lineage4.8 | in | ERR4799503 | HR-TB | lineage4.8 | in | ERR4799169 | Pre-XDR-TB | lineage4.8 | in | ERR4797483 | Pre-XDR-TB | lineage4.8 | in | ERR4797669 | Pre-XDR-TB | lineage4.8 | in | ERR4799182 | Pre-XDR-TB | lineage4.8 | in | ERR4821394 | Sensitive | lineage4.8 | gb | ERR4799754 | Pre-XDR-TB | lineage4.8 | in | SRR8600244 | Other | La1.8.1 | None | ERR4800367 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | in | ERR3256195 | Sensitive | lineage1.2.1.2.1 | None | ERR3283014 | HR-TB | None | ERR3283017 | HR-TB | None | SRR1167384 | Other | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4812298 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR403252 | HR-TB | lineage2.2.1 | None | ERR4800625 | Pre-XDR-TB | lineage4.8 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR17406769 | Pre-XDR-TB | lineage4.8 | None | SRR25827607 | Pre-XDR-TB | lineage4.8;lineage2.2.1 | None | SRR22175263 | Pre-XDR-TB | lineage4.8 | None | SRR25827345 | XDR-TB | lineage4.8;lineage3.1.2;lineage2.2.1;lineage1.1.2 | None | SRR25827799 | XDR-TB | lineage4.8 | None | ERR550984 | HR-TB | lineage2.2.1 | tm | ERR181887 | HR-TB | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None |
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