Rv0005 - c.93C>T
Drug resistance types
4 Sensitive
0 RR-TB
8 HR-TB
8 MDR-TB
18 Pre-XDR-TB
4 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 29 |
| lineage4.3 | 2 |
| La3;lineage4.9 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9 | 2 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2.1 | 3 |
| lineage2.2.1;lineage4.8 | 3 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 46 |
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799503 | HR-TB | lineage4.8 | in | SRR25827799 | XDR-TB | lineage4.8 | None | SRR25827874 | MDR-TB | lineage4.8 | None | ERR4799300 | Pre-XDR-TB | lineage4.8 | in | ERR4798043 | MDR-TB | lineage4.8 | in | ERR2516611 | Sensitive | lineage4.3 | pe | ERR4799182 | Pre-XDR-TB | lineage4.8 | in | SRR17406769 | Pre-XDR-TB | lineage4.8 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR25827345 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None | SRR8003011 | MDR-TB | lineage4.8 | in | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | ERR4799867 | Pre-XDR-TB | lineage4.8 | in | ERR4799796 | XDR-TB | lineage4.8 | in | ERR4797483 | Pre-XDR-TB | lineage4.8 | in | ERR4799754 | Pre-XDR-TB | lineage4.8 | in | ERR4817731 | HR-TB | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | SRR28045706 | Pre-XDR-TB | lineage4.8 | None | SRR28351345 | Pre-XDR-TB | lineage4.8 | None | SRR28351355 | MDR-TB | lineage4.8 | None | ERR4797800 | MDR-TB | lineage4.8 | in | ERR550984 | HR-TB | lineage2.2.1 | tm | ERR403252 | HR-TB | lineage2.2.1 | None | SRR6650192 | Sensitive | lineage4.8 | None | ERR4798005 | Pre-XDR-TB | lineage4.8 | in | ERR4797669 | Pre-XDR-TB | lineage4.8 | in | ERR4798091 | MDR-TB | lineage4.8 | in | SRR25827780 | XDR-TB | lineage2.2.1;lineage4.8 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR4812298 | Sensitive | lineage4.3 | None | ERR4827671 | HR-TB | lineage2.2.1 | None | ERR4798833 | Pre-XDR-TB | lineage4.8 | in | ERR4796946 | MDR-TB | lineage4.8 | in | ERR4796864 | Pre-XDR-TB | lineage4.8 | in | SRR25827607 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | ERR4799169 | Pre-XDR-TB | lineage4.8 | in | ERR212001 | HR-TB | None | SRR28351576 | MDR-TB | lineage4.8 | None | ERR4800367 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | in | ERR4800625 | Pre-XDR-TB | lineage4.8 | None | ERR4798828 | Pre-XDR-TB | lineage4.8 | in | SRR6044942 | HR-TB | lineage4.9 | None | ERR4821394 | Sensitive | lineage4.8 | gb | ERR4796969 | Pre-XDR-TB | lineage4.8 | in |
|---|
