Rv0005 - c.93C>T
Drug resistance types
4 Sensitive
0 RR-TB
8 HR-TB
9 MDR-TB
24 Pre-XDR-TB
4 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 36 |
| lineage2.2.1;lineage4.8 | 3 |
| lineage4.9 | 2 |
| lineage4.3 | 2 |
| La3;lineage4.9 | 2 |
| lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | 1 |
| lineage2.2.1 | 3 |
| 1 | |
| M.canetti;lineage4.9 | 2 |
| lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 53 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR25827874 | MDR-TB | lineage4.8 | None |
| ERR4800367 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | in |
| ERR4797800 | MDR-TB | lineage4.8 | in |
| ERR4798005 | Pre-XDR-TB | lineage4.8 | in |
| ERR4797483 | Pre-XDR-TB | lineage4.8 | in |
| ERR4797669 | Pre-XDR-TB | lineage4.8 | in |
| ERR13267126 | Pre-XDR-TB | lineage4.8 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| ERR4799796 | XDR-TB | lineage4.8 | in |
| ERR4812298 | Sensitive | lineage4.3 | None |
| SRR1167384 | Other | La3;lineage4.9 | None |
| ERR4798043 | MDR-TB | lineage4.8 | in |
| SRR28351355 | MDR-TB | lineage4.8 | None |
| SRR25827345 | XDR-TB | lineage1.1.2;lineage2.2.1;lineage3.1.2;lineage4.8 | None |
| ERR4800625 | Pre-XDR-TB | lineage4.8 | None |
| ERR4799754 | Pre-XDR-TB | lineage4.8 | in |
| SRR1165628 | Other | La3;lineage4.9 | None |
| ERR403252 | HR-TB | lineage2.2.1 | None |
| ERR4796969 | Pre-XDR-TB | lineage4.8 | in |
| ERR4821394 | Sensitive | lineage4.8 | gb |
| SRR6044942 | HR-TB | lineage4.9 | None |
| ERR4827671 | HR-TB | lineage2.2.1 | None |
| ERR13261254 | Pre-XDR-TB | lineage4.8 | None |
| SRR22175263 | Pre-XDR-TB | lineage4.8 | None |
| ERR4796946 | MDR-TB | lineage4.8 | in |
| ERR550984 | HR-TB | lineage2.2.1 | tm |
| ERR212001 | HR-TB | None | |
| SRR8003011 | MDR-TB | lineage4.8 | in |
| ERR13266943 | Pre-XDR-TB | lineage4.8 | None |
| ERR13266470 | Pre-XDR-TB | lineage4.8 | None |
| ERR4796864 | Pre-XDR-TB | lineage4.8 | in |
| SRR25827799 | XDR-TB | lineage4.8 | None |
| SRR25827607 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None |
| SRR28351576 | MDR-TB | lineage4.8 | None |
| ERR4798828 | Pre-XDR-TB | lineage4.8 | in |
| ERR4798091 | MDR-TB | lineage4.8 | in |
| SRR28045706 | Pre-XDR-TB | lineage4.8 | None |
| ERR3797028 | HR-TB | M.canetti;lineage4.9 | None |
| ERR4799867 | Pre-XDR-TB | lineage4.8 | in |
| ERR13262107 | Pre-XDR-TB | lineage4.8 | None |
| ERR4799300 | Pre-XDR-TB | lineage4.8 | in |
| SRR25827780 | XDR-TB | lineage2.2.1;lineage4.8 | None |
| ERR4799182 | Pre-XDR-TB | lineage4.8 | in |
| SRR6650192 | Sensitive | lineage4.8 | None |
| ERR2516611 | Sensitive | lineage4.3 | pe |
| SRR17406769 | Pre-XDR-TB | lineage4.8 | None |
| ERR13261476 | MDR-TB | lineage4.8 | None |
| SRR6046225 | Other | lineage4.9;lineage6.3 | None |
| ERR4798833 | Pre-XDR-TB | lineage4.8 | in |
| SRR6045233 | Other | M.canetti;lineage4.9 | None |
| ERR4799169 | Pre-XDR-TB | lineage4.8 | in |
| SRR28351345 | Pre-XDR-TB | lineage4.8 | None |
| ERR4799503 | HR-TB | lineage4.8 | in |
