Rv0005 - c.93C>T


Drug resistance types
27 Sensitive 0 RR-TB 17 HR-TB 5 MDR-TB 16 Pre-XDR-TB 2 XDR-TB 8 Other
lineage Counts
lineage Count
12
lineage4 4
La3 1
lineage4.9 22
lineage4.9;lineage2.2 1
lineage2.2 1
lineage2 1
lineage4.4.1.1.1 1
lineage2.2.1 3
lineage4.8 23
lineage4.8;lineage3.1.2;lineage2.2.1;lineage1.1.2 1
lineage4.3 2
La1.8.1 1
lineage4.8;lineage2.2.1 1
lineage1.2.1.2.1 1
spoligotype Counts
spoligotype Count
None 75
Geographic prevalence
Country level data for this variant is available for 23 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1169306 Other None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1175513 Other lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180413 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181390 Sensitive lineage2 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1184021 Sensitive lineage4.9 None
ERR550984 HR-TB lineage2.2.1 tm
SRR17406769 Pre-XDR-TB lineage4.8 None
SRR25827345 XDR-TB lineage4.8;lineage3.1.2;lineage2.2.1;lineage1.1.2 None
SRR22175263 Pre-XDR-TB lineage4.8 None
ERR176568 Other lineage4.3 None
ERR181887 HR-TB None
SRR5341373 HR-TB lineage4 None
ERR176751 HR-TB None
ERR212033 HR-TB None
ERR176643 HR-TB None
ERR212001 HR-TB None
ERR4816656 HR-TB None
ERR4818710 Sensitive lineage4.9 None
SRR6046225 HR-TB None
SRR8003011 MDR-TB lineage4.8 in
ERR4827671 HR-TB lineage2.2.1 None
SRR6045233 HR-TB None
ERR4799796 XDR-TB lineage4.8 in
ERR4798828 Pre-XDR-TB lineage4.8 in
ERR4798833 Pre-XDR-TB lineage4.8 in
ERR4798091 MDR-TB lineage4.8 in
ERR4797800 MDR-TB lineage4.8 in
ERR4799867 Pre-XDR-TB lineage4.8 in
ERR2516611 Sensitive lineage4.3 pe
ERR4798043 MDR-TB lineage4.8 in
ERR4799300 Pre-XDR-TB lineage4.8 in
ERR4798005 Pre-XDR-TB lineage4.8 in
ERR4796946 MDR-TB lineage4.8 in
ERR4796969 Pre-XDR-TB lineage4.8 in
ERR4796864 Pre-XDR-TB lineage4.8 in
ERR4799754 Pre-XDR-TB lineage4.8 in
ERR4799169 Pre-XDR-TB lineage4.8 in
ERR4797483 Pre-XDR-TB lineage4.8 in
ERR4799182 Pre-XDR-TB lineage4.8 in
ERR4799503 HR-TB lineage4.8 in
SRR6650192 Sensitive lineage4 None
ERR4797669 Pre-XDR-TB lineage4.8 in
SRR8600244 Other La1.8.1 None
ERR4800367 Pre-XDR-TB lineage4.8;lineage2.2.1 in
ERR403252 HR-TB lineage2.2.1 None
ERR3256195 Sensitive lineage1.2.1.2.1 None
ERR3283014 HR-TB None
ERR4821394 Sensitive lineage4.8 gb
ERR3283017 HR-TB None
ERR3797036 HR-TB None
ERR4812298 Sensitive lineage4 None
ERR473334 HR-TB lineage4.9 None
ERR4800625 Pre-XDR-TB lineage4.8 None