Rv0005 - p.Ala504Val
Drug resistance types
0 Sensitive
0 RR-TB
2 HR-TB
0 MDR-TB
223 Pre-XDR-TB
14 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 17 |
| lineage2.2.1 | 140 |
| lineage4.8 | 15 |
| lineage4.2.1 | 8 |
| lineage4.1.1.3 | 8 |
| lineage4.3.4.1 | 8 |
| lineage4.3.2.1 | 2 |
| lineage2.2;lineage4.2.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.3.2 | 1 |
| lineage1.2.2.2 | 1 |
| lineage3 | 7 |
| lineage4 | 1 |
| lineage4.1 | 2 |
| lineage4.4.2 | 3 |
| lineage4.5 | 2 |
| lineage4.1.2.1.1 | 7 |
| lineage2.2.2 | 8 |
| lineage4.6.2.2 | 1 |
| lineage4.3.4.2 | 3 |
| lineage1.1.2 | 1 |
| lineage4.2.2 | 1 |
| lineage2.2.1;lineage3 | 2 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.2.2.1 | 2 |
| lineage2.2.1;lineage4.3.2.1 | 1 |
| lineage3.1.2 | 1 |
| lineage1.1.2;lineage4.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR19276598 | Pre-XDR-TB | lineage4.3.3 | None | SRR8651661 | XDR-TB | lineage2.2.1 | cn | SRR5266560 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863938 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811302 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024880 | Pre-XDR-TB | lineage2.2.1 | cn | SRR7781495 | Pre-XDR-TB | lineage4.8 | None | SRR1062854 | Pre-XDR-TB | lineage4.3.3 | None | SRR7517736 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743498 | Pre-XDR-TB | lineage4.2.1 | None | ERR4799578 | Pre-XDR-TB | lineage2.2.1 | in | SRR7517722 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093245 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5863922 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743492 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864531 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864539 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887682 | Pre-XDR-TB | lineage2.2.1 | None | SRR3544743 | Pre-XDR-TB | lineage2.2.1 | None | ERR228104 | Other | lineage2.2.1 | None | ERR5863936 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035233 | Pre-XDR-TB | lineage4.3.4.1 | pt | SRR15316475 | Other | lineage2.2.1 | None | ERR2653146 | Pre-XDR-TB | lineage4.3.3 | None | SRR22175246 | Pre-XDR-TB | lineage2.2.1 | None | SRR18715471 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156734 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR11081492 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801542 | Pre-XDR-TB | lineage4.2.1 | None | SRR29356705 | Pre-XDR-TB | lineage2.2.1 | None | SRR27069365 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798669 | Pre-XDR-TB | lineage2.2;lineage4.2.1 | None | SRR29230911 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024915 | Pre-XDR-TB | lineage2.2.1 | cn | SRR27107279 | Pre-XDR-TB | lineage4.3.3 | None | ERR2517112 | Pre-XDR-TB | lineage2.2.1 | gb | ERR5864533 | Pre-XDR-TB | lineage2.2.1 | None | SRR29274033 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4812762 | Other | lineage4.3.2 | pe | SAMN02350440 | Pre-XDR-TB | lineage4.3.3 | za | ERR10762431 | Pre-XDR-TB | lineage4.2.1 | None | SRR28044449 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR28046102 | Pre-XDR-TB | lineage3 | None | SRR28393600 | Pre-XDR-TB | lineage4 | None | ERR5863928 | Pre-XDR-TB | lineage2.2.1 | None | SRR7131041 | Other | lineage4.8 | None | ERR2653107 | Pre-XDR-TB | lineage4.3.3 | None | ERR7911085 | Pre-XDR-TB | lineage4.1 | md | SRR8651637 | Pre-XDR-TB | lineage4.4.2 | cn | ERR502895 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864530 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865296 | Pre-XDR-TB | lineage2.2.1 | None | SRR10040490 | Pre-XDR-TB | lineage4.5 | None | SRR13312517 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800567 | Pre-XDR-TB | lineage2.2.1 | in | ERR5864535 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341360 | Pre-XDR-TB | lineage3 | in | ERR760598 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR28239741 | Other | lineage4.3.3 | None | ERR4811481 | Other | lineage4.4.2 | cn | ERR5863931 | Pre-XDR-TB | lineage2.2.1 | None | SRR24255919 | Pre-XDR-TB | lineage4.3.3 | None | ERR760748 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | ERR4829396 | Pre-XDR-TB | lineage4.8 | None | ERR5865293 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863937 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798559 | Pre-XDR-TB | lineage2.2.1 | None | ERR1163048 | Pre-XDR-TB | lineage4.8 | None | ERR13252179 | Pre-XDR-TB | lineage4.3.4.1 | None | SAMN01925657 | Pre-XDR-TB | lineage4.3.3 | None | SRR9971308 | XDR-TB | lineage2.2.2 | None | ERR2517120 | Pre-XDR-TB | lineage4.8 | gb | SRR13232585 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863932 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276916 | XDR-TB | lineage2.2.1 | None | ERR7911557 | Pre-XDR-TB | lineage2.2.1 | za | ERR4798804 | Pre-XDR-TB | lineage2.2.1 | in | SRR847775 | Pre-XDR-TB | lineage4.3.3 | za | SRR14088392 | Pre-XDR-TB | lineage3 | None | SRR7516321 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397096 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864541 | Pre-XDR-TB | lineage2.2.1 | None | SRR23861879 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799200 | HR-TB | lineage4.6.2.2 | in | SRR6257033 | Pre-XDR-TB | lineage2.2.1 | ru | ERR13284121 | Pre-XDR-TB | lineage4.3.3 | None | SRR5709839 | Pre-XDR-TB | lineage2.2.1 | th | SRR23691390 | Other | lineage2.2.1 | None | ERR5865838 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256213 | Other | lineage4.1 | None | SRR3544729 | Pre-XDR-TB | lineage2.2.1 | None | ERR4828870 | Pre-XDR-TB | lineage4.8 | None | ERR11081405 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056305 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR2010514 | Pre-XDR-TB | lineage2.2.1 | None | ERR13250190 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR10040439 | Pre-XDR-TB | lineage4.5 | None | ERR9992685 | XDR-TB | lineage2.2.2 | None | ERR5863930 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863934 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423559 | Pre-XDR-TB | lineage2.2.1 | None | SRR5153848 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR5864532 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232723 | Pre-XDR-TB | lineage4.3.3 | None | SRR15465760 | HR-TB | lineage1.1.2 | None | SRR28498675 | Pre-XDR-TB | lineage4.2.1 | None | SRR1166094 | Pre-XDR-TB | lineage4.8 | ro | ERR11488513 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10762320 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863933 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863926 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864534 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796795 | Pre-XDR-TB | lineage4.2.2 | in | ERR2020070 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156759 | Pre-XDR-TB | lineage4.3.2.1 | None | SRR6356946 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR13312544 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863935 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863923 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864540 | Pre-XDR-TB | lineage2.2.1 | None | ERR552237 | XDR-TB | lineage2.2.1 | None | ERR5863920 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081368 | Other | lineage4.1.2.1 | None | ERR11773791 | Pre-XDR-TB | lineage2.2.1 | None | SRR28044724 | Pre-XDR-TB | lineage3 | None | ERR5866277 | Pre-XDR-TB | lineage2.2.1 | None | ERR13250843 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR29356834 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681303 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR29538985 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093183 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748431 | Pre-XDR-TB | lineage2.2.1 | None | ERR229984 | Pre-XDR-TB | lineage2.2.1 | ru | ERR4813211 | Pre-XDR-TB | lineage4.8 | pe | SRR24256127 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232587 | Pre-XDR-TB | lineage2.2.1 | None | ERR550916 | XDR-TB | lineage2.2.1 | None | SRR28045207 | Pre-XDR-TB | lineage3 | None | ERR5863919 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865292 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284461 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312545 | Pre-XDR-TB | lineage2.2.1 | None | SRR16149121 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR13260884 | XDR-TB | lineage2.2.2 | None | SRR9738528 | Pre-XDR-TB | lineage4.8 | None | SRR21276933 | Pre-XDR-TB | lineage2.2.1 | None | SRR5761429 | Pre-XDR-TB | lineage2.2.1 | None | ERR275214 | Pre-XDR-TB | lineage4.3.4.1 | pt | ERR5865295 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341441 | Pre-XDR-TB | lineage3 | in | SRR2100469 | Other | lineage2.2.1 | None | ERR9806927 | Pre-XDR-TB | lineage4.8 | None | SRR29274243 | Pre-XDR-TB | lineage4.2.2.1 | None | ERR3287830 | Pre-XDR-TB | lineage4.1.2.1 | pe | ERR5863927 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866275 | Pre-XDR-TB | lineage2.2.1 | None | ERR11773806 | Pre-XDR-TB | lineage2.2.1 | None | ERR760795 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | ERR757165 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | ERR757160 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR924224 | Pre-XDR-TB | lineage4.3.3 | None | DRR130187 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR5864529 | Pre-XDR-TB | lineage2.2.1 | None | SRR23086708 | Pre-XDR-TB | lineage4.8 | None | SRR5341371 | Pre-XDR-TB | lineage3 | in | ERR5865294 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911407 | Pre-XDR-TB | lineage2.2.1 | us | ERR13264915 | Pre-XDR-TB | lineage4.8 | None | SRR26937138 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799932 | Pre-XDR-TB | lineage2.2.1 | in | DRR130087 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR1163049 | Pre-XDR-TB | lineage4.8 | None | ERR760757 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | SRR6824670 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6824669 | Pre-XDR-TB | lineage2.2.1 | cn | SRR10379912 | Pre-XDR-TB | lineage4.2.1 | None | ERR5864536 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207037 | Pre-XDR-TB | lineage2.2.1 | None | ERR4830504 | XDR-TB | lineage2.2.2 | None | ERR4872299 | XDR-TB | lineage4.2.1 | None | ERR760829 | Pre-XDR-TB | lineage4.1.2.1.1 | ar | ERR9992684 | XDR-TB | lineage2.2.2 | None | SRR7652978 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10762317 | Pre-XDR-TB | lineage4.2.1 | None | ERR11465157 | Pre-XDR-TB | lineage2.2.1;lineage4.3.2.1 | None | SRR671822 | Pre-XDR-TB | lineage2.2.1 | cn | ERR5863921 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992967 | XDR-TB | lineage2.2.2 | None | SRR5266539 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863939 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827740 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863925 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665762 | Pre-XDR-TB | lineage2.2.1 | None | ERR5917667 | Pre-XDR-TB | lineage4.3.3 | by | ERR4276896 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866467 | Pre-XDR-TB | lineage4.3.4.2 | None | ERR10748267 | XDR-TB | lineage2.2.2 | None | ERR4195619 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665763 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152909 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312546 | Pre-XDR-TB | lineage2.2.1 | None | ERR9121747 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488546 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5866466 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR29093191 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11773789 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257059 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR4829404 | Other | lineage4.8 | it | ERR7911699 | Pre-XDR-TB | lineage4.8 | za | ERR11083165 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312519 | Pre-XDR-TB | lineage2.2.1 | None | SRR13423557 | Pre-XDR-TB | lineage2.2.1 | None | SRR1011483 | Pre-XDR-TB | lineage4.3.3 | None | ERR11081165 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284131 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863929 | Pre-XDR-TB | lineage2.2.1 | None | ERR1768627 | Pre-XDR-TB | lineage2.2.1 | None | ERR1768624 | Pre-XDR-TB | lineage4.3.3 | None | SRR25207131 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156740 | Pre-XDR-TB | lineage2.2.1 | None | ERR7911385 | Pre-XDR-TB | lineage2.2.1 | us | ERR5866276 | Pre-XDR-TB | lineage2.2.1 | None | ERR5863918 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206944 | Pre-XDR-TB | lineage2.2.1 | None | SRR28045817 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266068 | Pre-XDR-TB | lineage3.1.2 | None | SRR7653024 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762321 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772413 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639794 | Pre-XDR-TB | lineage2.2.1 | None | ERR1034907 | Pre-XDR-TB | lineage4.3.4.1 | pt | SRR5341223 | Pre-XDR-TB | lineage1.1.2;lineage4.2.2.2 | in | ERR5864538 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315994 | XDR-TB | lineage2.2.1 | None | SRR24222957 | Pre-XDR-TB | lineage2.2.1 | None | SRR16088475 | Pre-XDR-TB | lineage2.2.1 | None | ERR3639780 | Pre-XDR-TB | lineage4.3.3 | None | SRR11567789 | Pre-XDR-TB | lineage4.4.2 | None | ERR2020054 | Pre-XDR-TB | lineage2.2.1 | None | ERR13289379 | XDR-TB | lineage2.2.2 | None | ERR5863916 | Pre-XDR-TB | lineage2.2.1 | None | SRR13312520 | Pre-XDR-TB | lineage2.2.1 | None | ERR12307396 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035100 | Pre-XDR-TB | lineage2.2.1.1 | vn | ERR5863924 | Pre-XDR-TB | lineage2.2.1 | None | SRR6916544 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | SRR29056327 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13285862 | Pre-XDR-TB | lineage4.2.1 | None | ERR13276404 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
