Rv0006 - c.-425G>T
Drug resistance types
3 Sensitive
1 RR-TB
5 HR-TB
3 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
18 Other
lineage Counts
| lineage | Count |
|---|---|
| 2 | |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.9 | 5 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4 | 1 |
| lineage3 | 2 |
| lineage2.1 | 1 |
| lineage4.9;lineage6.3 | 4 |
| lineage4.3.3 | 1 |
| La3;lineage4.9 | 2 |
| lineage2.1;lineage4.9 | 3 |
| La3;lineage4.8 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1184381 | MDR-TB | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR2027263 | Other | lineage4 | None | SRR6789626 | Other | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1165699 | Other | lineage4.9 | None | SRR22251779 | Sensitive | lineage3 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | SRR1196583 | Other | lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR1184294 | Other | lineage4.9 | None | SRR28044573 | Sensitive | lineage3 | None | SRR29231479 | RR-TB | lineage4.9 | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None |
|---|
