Rv0006 - c.1248C>T
Drug resistance types
5 Sensitive
1 RR-TB
4 HR-TB
3 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1.1;lineage2.2 | 1 |
| lineage1.1.1.1 | 2 |
| lineage2.2.1 | 1 |
| La1.7.1 | 1 |
| lineage4.9 | 4 |
| lineage4.8 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1.1.1;lineage2.2.1.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 1 |
| La1.8.1 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 18 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR26936949 | MDR-TB | lineage1.1.1.1;lineage2.2 | None |
| SRR5073501 | Sensitive | lineage1.1.1.1 | vn |
| SRR24083634 | Sensitive | lineage1.1.1.1 | None |
| SRR10315567 | HR-TB | lineage2.2.1 | None |
| ERR2815538 | Other | La1.7.1 | None |
| SRR3675246 | Other | lineage4.9 | None |
| SRR9970979 | Sensitive | lineage4.8 | None |
| SRR6398103 | HR-TB | lineage4.1.1.1 | ca |
| SRR26936950 | MDR-TB | lineage1.1.1;lineage2.2.1.1 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| ERR4798099 | Other | lineage4.9 | None |
| SRR6511621 | Sensitive | lineage4.9 | None |
| ERR1035122 | Sensitive | lineage4.9 | None |
| SRR9971041 | MDR-TB | lineage4.3.3 | None |
| SRR1791747 | Other | La1.8.1 | None |
| ERR736839 | HR-TB | M.canetti;lineage4.9 | None |
| SRR9970981 | RR-TB | lineage4.3.2.1 | None |
| SRR15296948 | Other | La1.8.2 | None |
