Rv0006 - c.192C>T
Drug resistance types
198 Sensitive
2 RR-TB
27 HR-TB
20 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
42 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 2 |
| 9 | |
| lineage7 | 17 |
| lineage2.2.1 | 21 |
| lineage4.6.3 | 1 |
| lineage2.2 | 2 |
| lineage4.6 | 1 |
| lineage3 | 13 |
| lineage4.3.3 | 10 |
| lineage4.3.4.2 | 3 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2.1 | 45 |
| lineage1.1.3.2 | 22 |
| lineage4.3.4.2.1;lineage1.1.3 | 1 |
| lineage4.1.2.1 | 7 |
| lineage3.1.1 | 35 |
| lineage4.8.2 | 10 |
| lineage4.8 | 6 |
| lineage4.1.1.3 | 5 |
| lineage4.4.1.1 | 3 |
| lineage1.1.2 | 9 |
| lineage3.1.2.1 | 1 |
| lineage4.9 | 5 |
| lineage4.1.1.3.1 | 1 |
| lineage5.1.3 | 1 |
| lineage1.2.2.1 | 7 |
| La1.7.1 | 8 |
| La1.8.1 | 6 |
| lineage9 | 1 |
| lineage4.2.2.2 | 3 |
| lineage1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage6.1.1 | 1 |
| lineage6 | 2 |
| lineage6.2.2;lineage4 | 1 |
| lineage4.9.1 | 11 |
| lineage1.2.2.2 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.1.2 | 4 |
| lineage4.7 | 1 |
| lineage4.1.2;lineage2.2.1 | 1 |
| lineage4.3.4.2.1;lineage4.3.4.1 | 1 |
| lineage2.2.2 | 1 |
| lineage1.1.1.1 | 1 |
| lineage1.1.3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 289 |
Geographic prevalence
Country level data for this variant is available for 224 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046594 | HR-TB | lineage4 | None | SRR6046824 | HR-TB | None | ERR1200640 | Sensitive | lineage7 | et | SRR671780 | MDR-TB | lineage2.2.1 | cn | ERR1200611 | Other | lineage4.6.3 | et | ERR4831546 | HR-TB | lineage2.2 | None | ERR1200621 | Sensitive | lineage4.6 | et | SRR671777 | Sensitive | lineage2.2.1 | cn | ERR233347 | Sensitive | lineage3 | None | SRR833025 | HR-TB | lineage4.3.3 | None | ERR036198 | Other | lineage4.3.4.2 | None | SRR833053 | HR-TB | lineage4.3.3 | None | ERR036190 | Other | lineage4.3.2.1 | mw | ERR036208 | Sensitive | lineage4.3.4.2.1 | mw | ERR036188 | MDR-TB | lineage4.3.4.2.1 | mw | ERR036230 | Sensitive | lineage1.1.3.2 | mw | ERR036217 | Sensitive | lineage1.1.3.2 | mw | ERR036225 | Other | lineage4.3.4.2.1 | None | ERR036224 | HR-TB | lineage4.3.4.2.1;lineage1.1.3 | None | ERR036228 | Sensitive | lineage4.3.4.2.1 | mw | ERR039344 | Sensitive | lineage4.1.2.1 | gb | ERR036239 | Sensitive | lineage4.3.4.2.1 | mw | ERR038299 | Sensitive | lineage3.1.1 | gb | ERR036237 | Sensitive | lineage4.3.4.2.1 | None | ERR040095 | Sensitive | lineage4.8.2 | gb | ERR040087 | Sensitive | lineage3.1.1 | gb | ERR039342 | Sensitive | lineage4.8 | gb | ERR040094 | Sensitive | lineage4.8.2 | gb | ERR040091 | Sensitive | lineage3.1.1 | gb | ERR040100 | Sensitive | lineage4.8.2 | gb | ERR040103 | Sensitive | lineage4.8.2 | gb | ERR040093 | Sensitive | lineage3.1.1 | gb | ERR040104 | Sensitive | lineage4.8.2 | gb | ERR040096 | Sensitive | lineage4.8.2 | gb | ERR040105 | Sensitive | lineage4.8.2 | gb | ERR040097 | Sensitive | lineage4.8.2 | gb | ERR040102 | Sensitive | lineage4.8.2 | gb | ERR040112 | Sensitive | lineage4.3.4.2.1 | ug | ERR040115 | MDR-TB | lineage4.1.1.3 | ug | ERR040108 | Sensitive | lineage3.1.1 | gb | ERR040107 | Sensitive | lineage3.1.1 | gb | ERR040128 | MDR-TB | lineage4.4.1.1 | ug | ERR040121 | MDR-TB | lineage1.1.2 | ug | ERR040120 | MDR-TB | lineage4.3.4.2.1 | ug | ERR040133 | Sensitive | lineage3.1.1 | ug | ERR040116 | Other | lineage4.3.4.2.1 | ug | ERR040126 | MDR-TB | lineage3.1.1 | ug | ERR040119 | HR-TB | lineage3.1.2.1 | ug | ERR040129 | MDR-TB | lineage3 | ug | ERR040130 | MDR-TB | lineage4.4.1.1 | ug | ERR040137 | MDR-TB | lineage4.1.1.3 | ug | ERR040134 | MDR-TB | lineage4.3.4.2.1 | ug | ERR040139 | MDR-TB | lineage3 | ug | ERR040138 | MDR-TB | lineage4.9 | ug | ERR046791 | Sensitive | lineage4.1.1.3.1 | gb | ERR046871 | Sensitive | lineage4.3.4.2.1 | gb | ERR046832 | Sensitive | lineage1.1.2 | gb | ERR3439432 | Other | None | ERR046874 | Sensitive | lineage4.1.2.1 | gb | ERR046918 | RR-TB | lineage5.1.3 | gb | ERR046886 | Sensitive | lineage1.2.2.1 | None | ERR046887 | Sensitive | lineage4.3.3 | gb | ERR1034652 | Other | None | ERR3797036 | HR-TB | None | ERR4798406 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | SRR10869000 | Sensitive | lineage4.3.3 | None | ERR8975381 | HR-TB | lineage4.3.3 | None | SRR1792002 | Other | La1.7.1 | None | SRR1791780 | Other | La1.8.1 | None | SRR1791708 | Other | La1.7.1 | None | SRR1791776 | Other | La1.7.1 | None | SRR1791838 | Other | La1.8.1 | None | SRR1791947 | Other | La1.8.1 | None | SRR1791995 | Other | La1.8.1 | None | SRR1792495 | Other | La1.7.1 | None | SRR1792073 | Other | La1.7.1 | None | SRR1792059 | Other | La1.8.1 | None | SRR18213841 | Sensitive | lineage4.8.2 | None | SRR1792486 | Other | La1.7.1 | None | SRR1792499 | Other | La1.7.1 | None | SRR1792506 | Other | La1.8.1 | None | ERR181315 | MDR-TB | lineage9 | so | ERR233355 | Sensitive | lineage7 | None | ERR158583 | HR-TB | None | SRR305201 | Sensitive | lineage4.9 | None | ERR181440 | Sensitive | lineage2.2.1 | dj | ERR1200603 | Sensitive | lineage7 | None | ERR1200620 | MDR-TB | lineage4.2.2.2 | et | ERR233363 | Sensitive | lineage1.1.1 | None | ERR1200618 | Sensitive | lineage7 | None | ERR233361 | Sensitive | lineage2.2.1.1 | None | ERR1193641 | Sensitive | lineage4.3.3 | et | ERR233362 | Sensitive | lineage6.1.1 | sn | SRR3675550 | Other | None | ERR1200609 | Sensitive | lineage3 | et | ERR233346 | Sensitive | lineage7 | None | ERR1200637 | Sensitive | lineage4.2.2.2 | et | ERR1200631 | Sensitive | lineage7 | et | ERR233368 | Sensitive | lineage6 | None | SAMN03246243 | MDR-TB | lineage2.2.1 | cn | ERR233367 | Sensitive | lineage6.2.2;lineage4 | None | SAMN02053770 | HR-TB | lineage4.3.3 | za | SRR4019491 | Other | La1.7.1 | None | ERR1200613 | Sensitive | lineage7 | et | ERR233369 | Other | lineage4.8 | et | ERR1200630 | Sensitive | lineage3.1.1 | et | ERR1200629 | Sensitive | lineage1.2.2.1 | et | ERR233353 | Sensitive | lineage1.2.2.1 | et | ERR234127 | Sensitive | lineage2.2.1 | None | ERR245646 | Sensitive | lineage3.1.1 | mw | ERR234138 | Sensitive | lineage2.2.1 | cn | ERR245650 | Sensitive | lineage4.9.1 | mw | ERR245656 | Sensitive | lineage1.1.3.2 | mw | ERR245647 | Sensitive | lineage1.1.3.2 | mw | ERR234126 | Sensitive | lineage2.2.1 | cn | ERR234128 | Sensitive | lineage2.2.1 | cn | ERR1200612 | Sensitive | lineage7 | et | ERR245651 | MDR-TB | lineage1.2.2.2 | mw | ERR245653 | Sensitive | lineage4.9.1 | mw | ERR245659 | Other | lineage4.9.1 | mw | ERR245649 | Other | lineage4.8 | mw | ERR245655 | Sensitive | lineage2.2.1 | mw | ERR245652 | Sensitive | lineage1.1.3.2 | mw | ERR245657 | Sensitive | lineage1.1.3.2 | mw | ERR245667 | Sensitive | lineage4.3.4.2.1 | mw | ERR245654 | Sensitive | lineage1.1.3.2 | mw | ERR245658 | Sensitive | lineage4.9.1 | mw | ERR245661 | Sensitive | lineage4.3.4.2.1 | mw | ERR245660 | Sensitive | lineage2.2.1 | mw | ERR245668 | Sensitive | lineage3.1.1 | mw | ERR245663 | Other | lineage2.2.1 | mw | ERR245671 | Sensitive | lineage3.1.1 | mw | ERR245664 | Sensitive | lineage4.3.4.2.1 | mw | ERR245673 | Sensitive | lineage4.3.4.2.1 | mw | ERR245665 | Sensitive | lineage4.3.4.2.1 | mw | ERR245666 | Sensitive | lineage4.3.4.2 | mw | ERR245676 | Sensitive | lineage3.1.1 | mw | ERR245669 | Other | lineage3 | mw | ERR245681 | Sensitive | lineage4.3.4.2.1 | mw | ERR245679 | Sensitive | lineage1.1.3.2 | mw | ERR245680 | Sensitive | lineage2.2.1 | mw | ERR245682 | Other | lineage3 | mw | ERR245675 | Sensitive | lineage1.1.2 | None | ERR245674 | Sensitive | lineage1.1.3.2 | mw | ERR245678 | Other | lineage3 | mw | ERR245677 | Sensitive | lineage1.1.3.2 | mw | ERR245683 | Sensitive | lineage4.3.4.2.1 | mw | ERR245684 | Sensitive | lineage3.1.1 | mw | ERR245685 | Sensitive | lineage4.9.1 | mw | ERR245687 | Sensitive | lineage3.1.1 | mw | ERR245688 | Sensitive | lineage3.1.1 | mw | ERR245692 | Sensitive | lineage2.2.1 | mw | ERR245690 | Sensitive | lineage4.3.4.1 | mw | ERR245689 | Sensitive | lineage3.1.1 | mw | ERR245686 | Other | lineage4.3.4.2 | mw | ERR245697 | Sensitive | lineage4.3.4.1 | mw | ERR245693 | Sensitive | lineage4.3.4.2.1 | mw | ERR245691 | Sensitive | lineage1.1.2 | mw | ERR245695 | Sensitive | lineage1.1.3.2 | mw | ERR245699 | Sensitive | lineage1.1.2 | mw | ERR245703 | Sensitive | lineage1.1.3.2 | mw | ERR245696 | Sensitive | lineage2.2.1 | mw | ERR245698 | Sensitive | lineage1.1.2 | mw | ERR245707 | Sensitive | lineage4.3.4.2.1 | mw | ERR245706 | Sensitive | lineage4.3.4.2.1 | mw | ERR245704 | Sensitive | lineage3.1.1 | mw | ERR245701 | Other | lineage4.8 | mw | ERR245702 | Sensitive | lineage3.1.1 | mw | ERR245711 | Other | lineage4.1.2 | mw | ERR245708 | Sensitive | lineage4.3.4.2.1 | mw | ERR245710 | Sensitive | lineage2.2.1 | mw | ERR245714 | Sensitive | lineage4.9.1 | mw | ERR245713 | Sensitive | lineage3.1.1 | mw | ERR245712 | Sensitive | lineage4.9.1 | mw | ERR245715 | Sensitive | lineage3.1.1 | mw | ERR245718 | HR-TB | lineage4.3.4.2.1 | mw | ERR245717 | Sensitive | lineage1.1.3.2 | mw | ERR245726 | Sensitive | lineage3.1.1 | mw | ERR245722 | Other | lineage3 | mw | ERR245719 | Sensitive | lineage4.9.1 | mw | ERR245721 | Sensitive | lineage1.1.3.2 | mw | ERR245724 | Sensitive | lineage4.3.4.2.1 | mw | ERR245727 | Sensitive | lineage1.2.2.1 | mw | ERR245720 | Sensitive | lineage1.1.3.2 | mw | ERR245723 | Sensitive | lineage2.2.1 | mw | ERR245731 | Sensitive | lineage4.9.1 | mw | ERR245725 | HR-TB | lineage4.3.4.2.1 | mw | ERR245729 | Other | lineage4.3.4.2.1 | mw | ERR245734 | Sensitive | lineage1.1.3.2 | mw | ERR245728 | Sensitive | lineage2.2.1 | mw | ERR245733 | HR-TB | lineage4.3.4.2.1 | mw | ERR245738 | Sensitive | lineage4.3.4.2.1 | mw | ERR245730 | Sensitive | lineage4.3.4.2.1 | mw | ERR245732 | Sensitive | lineage3.1.1 | mw | ERR245737 | Sensitive | lineage4.3.4.2.1 | mw | ERR245736 | Sensitive | lineage4.9 | mw | ERR245744 | Sensitive | lineage4.3.4.2.1 | mw | ERR245740 | Sensitive | lineage4.1.2 | None | ERR245742 | Sensitive | lineage1.1.2 | mw | ERR245739 | Sensitive | lineage1.2.2.1 | mw | ERR245750 | Sensitive | lineage4.3.4.2.1 | mw | ERR245746 | Sensitive | lineage4.3.4.2.1 | mw | ERR245748 | Sensitive | lineage1.1.3.2 | mw | ERR245749 | Sensitive | lineage4.3.4.2.1 | mw | ERR245741 | MDR-TB | lineage4.3.4.2.1 | mw | ERR245743 | Sensitive | lineage4.7 | mw | ERR245753 | Other | lineage3 | mw | ERR245751 | Sensitive | lineage1.2.2.1 | mw | ERR245759 | HR-TB | lineage4.1.2.1 | mw | ERR245754 | Sensitive | lineage4.1.2;lineage2.2.1 | mw | ERR245757 | HR-TB | lineage3.1.1 | mw | ERR245764 | HR-TB | lineage3.1.1 | None | ERR245762 | Sensitive | lineage4.3.2.1 | mw | ERR245758 | Other | lineage4.9.1 | None | ERR245756 | Sensitive | lineage4.3.4.2.1 | mw | ERR245774 | HR-TB | lineage4.1.2.1 | mw | ERR245755 | Sensitive | lineage4.3.4.2.1 | mw | ERR245766 | Sensitive | lineage3.1.1 | mw | ERR245763 | Sensitive | lineage1.1.3.2 | mw | ERR245773 | Sensitive | lineage4.3.4.2.1 | mw | ERR245769 | Sensitive | lineage4.3.4.2.1 | None | ERR245778 | Sensitive | lineage4.3.4.2.1 | mw | ERR245783 | Sensitive | lineage2.2.1 | mw | ERR245775 | Sensitive | lineage1.1.3.2 | mw | ERR245777 | HR-TB | lineage3.1.1 | mw | ERR245780 | Sensitive | lineage4.3.4.2.1 | mw | ERR245779 | Sensitive | lineage4.3.4.2.1 | mw | ERR245785 | Sensitive | lineage4.9 | mw | ERR245784 | Sensitive | lineage1.1.3.2 | mw | ERR245781 | Sensitive | lineage1.1.3.2 | mw | ERR245791 | Sensitive | lineage4.1.2 | mw | ERR245786 | Sensitive | lineage4.1.2 | mw | ERR245788 | Sensitive | lineage4.3.4.2.1 | mw | ERR245792 | HR-TB | lineage3.1.1 | mw | ERR245805 | HR-TB | lineage3.1.1 | mw | ERR245796 | Sensitive | lineage3.1.1 | mw | ERR245797 | Sensitive | lineage4.3.4.2.1;lineage4.3.4.1 | mw | ERR245800 | Sensitive | lineage4.4.1.1 | mw | ERR245810 | Sensitive | lineage4.9.1 | None | ERR245803 | Sensitive | lineage3.1.1 | mw | ERR245804 | Sensitive | lineage4.1.1.3 | mw | ERR245806 | Sensitive | lineage4.8 | mw | ERR245801 | Other | lineage4.3.4.2.1 | None | ERR245811 | Sensitive | lineage1.2.2.1 | mw | ERR245818 | Sensitive | lineage4.9 | None | ERR245829 | MDR-TB | lineage1.2.2.2 | mw | ERR245822 | Other | lineage1.1.3.2 | None | ERR245826 | Sensitive | lineage4.3.4.2.1 | mw | ERR245830 | Other | lineage3 | mw | ERR245834 | Sensitive | lineage2.2.1 | mw | ERR245839 | Sensitive | lineage3.1.1 | mw | ERR245831 | Sensitive | lineage2.2.1 | mw | ERR245832 | HR-TB | lineage3.1.1 | mw | ERR245827 | Sensitive | lineage3.1.1 | mw | ERR245833 | Sensitive | lineage1.2.2.2 | mw | ERR245842 | Sensitive | lineage4.1.1.3 | mw | ERR245838 | HR-TB | lineage3.1.1 | mw | ERR245841 | Sensitive | lineage4.1.1.3 | mw | ERR1200638 | Sensitive | lineage3 | et | ERR245849 | Other | lineage3 | mw | ERR1200635 | Sensitive | lineage7 | et | ERR1200608 | Sensitive | lineage7 | et | ERR1200636 | Other | lineage7 | et | ERR233359 | Sensitive | lineage2.2.2 | kr | ERR233354 | Sensitive | lineage7 | None | ERR233358 | RR-TB | lineage4.1.2.1 | mx | ERR1200606 | Sensitive | lineage7 | et | ERR233360 | Sensitive | lineage3 | None | ERR1200615 | Sensitive | lineage4.8 | et | ERR1200634 | Sensitive | lineage7 | et | ERR233351 | Sensitive | lineage1.1.2 | et | ERR1200604 | Sensitive | lineage7 | et | ERR1200624 | Sensitive | lineage7 | et | ERR233352 | Sensitive | lineage4.1.2.1 | None | ERR1200623 | Sensitive | lineage7 | et | ERR1200628 | Sensitive | lineage4.1.2.1 | None | ERR233350 | MDR-TB | lineage4.2.2.2 | et | ERR233366 | Sensitive | lineage6 | None | ERR233365 | Sensitive | lineage1.1.1.1 | vn | ERR1200627 | Sensitive | lineage4.3.3 | et | SRR5535789 | Sensitive | lineage4.3.3 | None | SRR5535817 | Sensitive | lineage4.3.3 | None | ERR1200632 | Sensitive | lineage1.1.3.1 | et | ERR233370 | Other | lineage2.2.1 | None | SRR6045555 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | ERR1200626 | Sensitive | lineage1.1.2 | et |
|---|
