Rv0006 - c.192C>T
Drug resistance types
5 Sensitive
0 RR-TB
10 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 4 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.3.3 | 9 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 2 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage1.2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 24 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046485 | Other | lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | SRR833025 | Other | lineage4.3.3 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR29055567 | Sensitive | lineage4.3.3 | None | SRR833053 | HR-TB | lineage4.3.3 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR5535789 | Sensitive | lineage4.3.3 | None | SRR5535817 | Sensitive | lineage4.3.3 | None | SAMN02053770 | HR-TB | lineage4.3.3 | za | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | ERR8975381 | HR-TB | lineage4.3.3 | None | SRR10869000 | Sensitive | lineage4.3.3 | None | ERR11775070 | MDR-TB | lineage4.3.3 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR29231154 | HR-TB | lineage1.2.2.2 | None | ERR3290633 | Other | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
|---|
