Rv0006 - c.192C>T


Drug resistance types
198 Sensitive 2 RR-TB 27 HR-TB 20 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 42 Other
lineage Counts
lineage Count
lineage4 2
9
lineage7 17
lineage2.2.1 21
lineage4.6.3 1
lineage2.2 2
lineage4.6 1
lineage3 13
lineage4.3.3 10
lineage4.3.4.2 3
lineage4.3.2.1 2
lineage4.3.4.2.1 45
lineage1.1.3.2 22
lineage4.3.4.2.1;lineage1.1.3 1
lineage4.1.2.1 7
lineage3.1.1 35
lineage4.8.2 10
lineage4.8 6
lineage4.1.1.3 5
lineage4.4.1.1 3
lineage1.1.2 9
lineage3.1.2.1 1
lineage4.9 5
lineage4.1.1.3.1 1
lineage5.1.3 1
lineage1.2.2.1 7
La1.7.1 8
La1.8.1 6
lineage9 1
lineage4.2.2.2 3
lineage1.1.1 1
lineage2.2.1.1 1
lineage6.1.1 1
lineage6 2
lineage6.2.2;lineage4 1
lineage4.9.1 11
lineage1.2.2.2 3
lineage4.3.4.1 2
lineage4.1.2 4
lineage4.7 1
lineage4.1.2;lineage2.2.1 1
lineage4.3.4.2.1;lineage4.3.4.1 1
lineage2.2.2 1
lineage1.1.1.1 1
lineage1.1.3.1 1
spoligotype Counts
spoligotype Count
None 289
Geographic prevalence
Country level data for this variant is available for 224 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046594 HR-TB lineage4 None
SRR6046824 HR-TB None
ERR1200640 Sensitive lineage7 et
SRR671780 MDR-TB lineage2.2.1 cn
ERR1200611 Other lineage4.6.3 et
ERR4831546 HR-TB lineage2.2 None
ERR1200621 Sensitive lineage4.6 et
SRR671777 Sensitive lineage2.2.1 cn
ERR233347 Sensitive lineage3 None
SRR833025 HR-TB lineage4.3.3 None
ERR036198 Other lineage4.3.4.2 None
SRR833053 HR-TB lineage4.3.3 None
ERR036190 Other lineage4.3.2.1 mw
ERR036208 Sensitive lineage4.3.4.2.1 mw
ERR036188 MDR-TB lineage4.3.4.2.1 mw
ERR036230 Sensitive lineage1.1.3.2 mw
ERR036217 Sensitive lineage1.1.3.2 mw
ERR036225 Other lineage4.3.4.2.1 None
ERR036224 HR-TB lineage4.3.4.2.1;lineage1.1.3 None
ERR036228 Sensitive lineage4.3.4.2.1 mw
ERR039344 Sensitive lineage4.1.2.1 gb
ERR036239 Sensitive lineage4.3.4.2.1 mw
ERR038299 Sensitive lineage3.1.1 gb
ERR036237 Sensitive lineage4.3.4.2.1 None
ERR040095 Sensitive lineage4.8.2 gb
ERR040087 Sensitive lineage3.1.1 gb
ERR039342 Sensitive lineage4.8 gb
ERR040094 Sensitive lineage4.8.2 gb
ERR040091 Sensitive lineage3.1.1 gb
ERR040100 Sensitive lineage4.8.2 gb
ERR040103 Sensitive lineage4.8.2 gb
ERR040093 Sensitive lineage3.1.1 gb
ERR040104 Sensitive lineage4.8.2 gb
ERR040096 Sensitive lineage4.8.2 gb
ERR040105 Sensitive lineage4.8.2 gb
ERR040097 Sensitive lineage4.8.2 gb
ERR040102 Sensitive lineage4.8.2 gb
ERR040112 Sensitive lineage4.3.4.2.1 ug
ERR040115 MDR-TB lineage4.1.1.3 ug
ERR040108 Sensitive lineage3.1.1 gb
ERR040107 Sensitive lineage3.1.1 gb
ERR040128 MDR-TB lineage4.4.1.1 ug
ERR040121 MDR-TB lineage1.1.2 ug
ERR040120 MDR-TB lineage4.3.4.2.1 ug
ERR040133 Sensitive lineage3.1.1 ug
ERR040116 Other lineage4.3.4.2.1 ug
ERR040126 MDR-TB lineage3.1.1 ug
ERR040119 HR-TB lineage3.1.2.1 ug
ERR040129 MDR-TB lineage3 ug
ERR040130 MDR-TB lineage4.4.1.1 ug
ERR040137 MDR-TB lineage4.1.1.3 ug
ERR040134 MDR-TB lineage4.3.4.2.1 ug
ERR040139 MDR-TB lineage3 ug
ERR040138 MDR-TB lineage4.9 ug
ERR046791 Sensitive lineage4.1.1.3.1 gb
ERR046871 Sensitive lineage4.3.4.2.1 gb
ERR046832 Sensitive lineage1.1.2 gb
ERR3439432 Other None
ERR046874 Sensitive lineage4.1.2.1 gb
ERR046918 RR-TB lineage5.1.3 gb
ERR046886 Sensitive lineage1.2.2.1 None
ERR046887 Sensitive lineage4.3.3 gb
ERR1034652 Other None
ERR3797036 HR-TB None
ERR4798406 HR-TB None
ERR4810624 HR-TB lineage2.2 None
SRR10869000 Sensitive lineage4.3.3 None
ERR8975381 HR-TB lineage4.3.3 None
SRR1792002 Other La1.7.1 None
SRR1791780 Other La1.8.1 None
SRR1791708 Other La1.7.1 None
SRR1791776 Other La1.7.1 None
SRR1791838 Other La1.8.1 None
SRR1791947 Other La1.8.1 None
SRR1791995 Other La1.8.1 None
SRR1792495 Other La1.7.1 None
SRR1792073 Other La1.7.1 None
SRR1792059 Other La1.8.1 None
SRR18213841 Sensitive lineage4.8.2 None
SRR1792486 Other La1.7.1 None
SRR1792499 Other La1.7.1 None
SRR1792506 Other La1.8.1 None
ERR181315 MDR-TB lineage9 so
ERR233355 Sensitive lineage7 None
ERR158583 HR-TB None
SRR305201 Sensitive lineage4.9 None
ERR181440 Sensitive lineage2.2.1 dj
ERR1200603 Sensitive lineage7 None
ERR1200620 MDR-TB lineage4.2.2.2 et
ERR233363 Sensitive lineage1.1.1 None
ERR1200618 Sensitive lineage7 None
ERR233361 Sensitive lineage2.2.1.1 None
ERR1193641 Sensitive lineage4.3.3 et
ERR233362 Sensitive lineage6.1.1 sn
SRR3675550 Other None
ERR1200609 Sensitive lineage3 et
ERR233346 Sensitive lineage7 None
ERR1200637 Sensitive lineage4.2.2.2 et
ERR1200631 Sensitive lineage7 et
ERR233368 Sensitive lineage6 None
SAMN03246243 MDR-TB lineage2.2.1 cn
ERR233367 Sensitive lineage6.2.2;lineage4 None
SAMN02053770 HR-TB lineage4.3.3 za
SRR4019491 Other La1.7.1 None
ERR1200613 Sensitive lineage7 et
ERR233369 Other lineage4.8 et
ERR1200630 Sensitive lineage3.1.1 et
ERR1200629 Sensitive lineage1.2.2.1 et
ERR233353 Sensitive lineage1.2.2.1 et
ERR234127 Sensitive lineage2.2.1 None
ERR245646 Sensitive lineage3.1.1 mw
ERR234138 Sensitive lineage2.2.1 cn
ERR245650 Sensitive lineage4.9.1 mw
ERR245656 Sensitive lineage1.1.3.2 mw
ERR245647 Sensitive lineage1.1.3.2 mw
ERR234126 Sensitive lineage2.2.1 cn
ERR234128 Sensitive lineage2.2.1 cn
ERR1200612 Sensitive lineage7 et
ERR245651 MDR-TB lineage1.2.2.2 mw
ERR245653 Sensitive lineage4.9.1 mw
ERR245659 Other lineage4.9.1 mw
ERR245649 Other lineage4.8 mw
ERR245655 Sensitive lineage2.2.1 mw
ERR245652 Sensitive lineage1.1.3.2 mw
ERR245657 Sensitive lineage1.1.3.2 mw
ERR245667 Sensitive lineage4.3.4.2.1 mw
ERR245654 Sensitive lineage1.1.3.2 mw
ERR245658 Sensitive lineage4.9.1 mw
ERR245661 Sensitive lineage4.3.4.2.1 mw
ERR245660 Sensitive lineage2.2.1 mw
ERR245668 Sensitive lineage3.1.1 mw
ERR245663 Other lineage2.2.1 mw
ERR245671 Sensitive lineage3.1.1 mw
ERR245664 Sensitive lineage4.3.4.2.1 mw
ERR245673 Sensitive lineage4.3.4.2.1 mw
ERR245665 Sensitive lineage4.3.4.2.1 mw
ERR245666 Sensitive lineage4.3.4.2 mw
ERR245676 Sensitive lineage3.1.1 mw
ERR245669 Other lineage3 mw
ERR245681 Sensitive lineage4.3.4.2.1 mw
ERR245679 Sensitive lineage1.1.3.2 mw
ERR245680 Sensitive lineage2.2.1 mw
ERR245682 Other lineage3 mw
ERR245675 Sensitive lineage1.1.2 None
ERR245674 Sensitive lineage1.1.3.2 mw
ERR245678 Other lineage3 mw
ERR245677 Sensitive lineage1.1.3.2 mw
ERR245683 Sensitive lineage4.3.4.2.1 mw
ERR245684 Sensitive lineage3.1.1 mw
ERR245685 Sensitive lineage4.9.1 mw
ERR245687 Sensitive lineage3.1.1 mw
ERR245688 Sensitive lineage3.1.1 mw
ERR245692 Sensitive lineage2.2.1 mw
ERR245690 Sensitive lineage4.3.4.1 mw
ERR245689 Sensitive lineage3.1.1 mw
ERR245686 Other lineage4.3.4.2 mw
ERR245697 Sensitive lineage4.3.4.1 mw
ERR245693 Sensitive lineage4.3.4.2.1 mw
ERR245691 Sensitive lineage1.1.2 mw
ERR245695 Sensitive lineage1.1.3.2 mw
ERR245699 Sensitive lineage1.1.2 mw
ERR245703 Sensitive lineage1.1.3.2 mw
ERR245696 Sensitive lineage2.2.1 mw
ERR245698 Sensitive lineage1.1.2 mw
ERR245707 Sensitive lineage4.3.4.2.1 mw
ERR245706 Sensitive lineage4.3.4.2.1 mw
ERR245704 Sensitive lineage3.1.1 mw
ERR245701 Other lineage4.8 mw
ERR245702 Sensitive lineage3.1.1 mw
ERR245711 Other lineage4.1.2 mw
ERR245708 Sensitive lineage4.3.4.2.1 mw
ERR245710 Sensitive lineage2.2.1 mw
ERR245714 Sensitive lineage4.9.1 mw
ERR245713 Sensitive lineage3.1.1 mw
ERR245712 Sensitive lineage4.9.1 mw
ERR245715 Sensitive lineage3.1.1 mw
ERR245718 HR-TB lineage4.3.4.2.1 mw
ERR245717 Sensitive lineage1.1.3.2 mw
ERR245726 Sensitive lineage3.1.1 mw
ERR245722 Other lineage3 mw
ERR245719 Sensitive lineage4.9.1 mw
ERR245721 Sensitive lineage1.1.3.2 mw
ERR245724 Sensitive lineage4.3.4.2.1 mw
ERR245727 Sensitive lineage1.2.2.1 mw
ERR245720 Sensitive lineage1.1.3.2 mw
ERR245723 Sensitive lineage2.2.1 mw
ERR245731 Sensitive lineage4.9.1 mw
ERR245725 HR-TB lineage4.3.4.2.1 mw
ERR245729 Other lineage4.3.4.2.1 mw
ERR245734 Sensitive lineage1.1.3.2 mw
ERR245728 Sensitive lineage2.2.1 mw
ERR245733 HR-TB lineage4.3.4.2.1 mw
ERR245738 Sensitive lineage4.3.4.2.1 mw
ERR245730 Sensitive lineage4.3.4.2.1 mw
ERR245732 Sensitive lineage3.1.1 mw
ERR245737 Sensitive lineage4.3.4.2.1 mw
ERR245736 Sensitive lineage4.9 mw
ERR245744 Sensitive lineage4.3.4.2.1 mw
ERR245740 Sensitive lineage4.1.2 None
ERR245742 Sensitive lineage1.1.2 mw
ERR245739 Sensitive lineage1.2.2.1 mw
ERR245750 Sensitive lineage4.3.4.2.1 mw
ERR245746 Sensitive lineage4.3.4.2.1 mw
ERR245748 Sensitive lineage1.1.3.2 mw
ERR245749 Sensitive lineage4.3.4.2.1 mw
ERR245741 MDR-TB lineage4.3.4.2.1 mw
ERR245743 Sensitive lineage4.7 mw
ERR245753 Other lineage3 mw
ERR245751 Sensitive lineage1.2.2.1 mw
ERR245759 HR-TB lineage4.1.2.1 mw
ERR245754 Sensitive lineage4.1.2;lineage2.2.1 mw
ERR245757 HR-TB lineage3.1.1 mw
ERR245764 HR-TB lineage3.1.1 None
ERR245762 Sensitive lineage4.3.2.1 mw
ERR245758 Other lineage4.9.1 None
ERR245756 Sensitive lineage4.3.4.2.1 mw
ERR245774 HR-TB lineage4.1.2.1 mw
ERR245755 Sensitive lineage4.3.4.2.1 mw
ERR245766 Sensitive lineage3.1.1 mw
ERR245763 Sensitive lineage1.1.3.2 mw
ERR245773 Sensitive lineage4.3.4.2.1 mw
ERR245769 Sensitive lineage4.3.4.2.1 None
ERR245778 Sensitive lineage4.3.4.2.1 mw
ERR245783 Sensitive lineage2.2.1 mw
ERR245775 Sensitive lineage1.1.3.2 mw
ERR245777 HR-TB lineage3.1.1 mw
ERR245780 Sensitive lineage4.3.4.2.1 mw
ERR245779 Sensitive lineage4.3.4.2.1 mw
ERR245785 Sensitive lineage4.9 mw
ERR245784 Sensitive lineage1.1.3.2 mw
ERR245781 Sensitive lineage1.1.3.2 mw
ERR245791 Sensitive lineage4.1.2 mw
ERR245786 Sensitive lineage4.1.2 mw
ERR245788 Sensitive lineage4.3.4.2.1 mw
ERR245792 HR-TB lineage3.1.1 mw
ERR245805 HR-TB lineage3.1.1 mw
ERR245796 Sensitive lineage3.1.1 mw
ERR245797 Sensitive lineage4.3.4.2.1;lineage4.3.4.1 mw
ERR245800 Sensitive lineage4.4.1.1 mw
ERR245810 Sensitive lineage4.9.1 None
ERR245803 Sensitive lineage3.1.1 mw
ERR245804 Sensitive lineage4.1.1.3 mw
ERR245806 Sensitive lineage4.8 mw
ERR245801 Other lineage4.3.4.2.1 None
ERR245811 Sensitive lineage1.2.2.1 mw
ERR245818 Sensitive lineage4.9 None
ERR245829 MDR-TB lineage1.2.2.2 mw
ERR245822 Other lineage1.1.3.2 None
ERR245826 Sensitive lineage4.3.4.2.1 mw
ERR245830 Other lineage3 mw
ERR245834 Sensitive lineage2.2.1 mw
ERR245839 Sensitive lineage3.1.1 mw
ERR245831 Sensitive lineage2.2.1 mw
ERR245832 HR-TB lineage3.1.1 mw
ERR245827 Sensitive lineage3.1.1 mw
ERR245833 Sensitive lineage1.2.2.2 mw
ERR245842 Sensitive lineage4.1.1.3 mw
ERR245838 HR-TB lineage3.1.1 mw
ERR245841 Sensitive lineage4.1.1.3 mw
ERR1200638 Sensitive lineage3 et
ERR245849 Other lineage3 mw
ERR1200635 Sensitive lineage7 et
ERR1200608 Sensitive lineage7 et
ERR1200636 Other lineage7 et
ERR233359 Sensitive lineage2.2.2 kr
ERR233354 Sensitive lineage7 None
ERR233358 RR-TB lineage4.1.2.1 mx
ERR1200606 Sensitive lineage7 et
ERR233360 Sensitive lineage3 None
ERR1200615 Sensitive lineage4.8 et
ERR1200634 Sensitive lineage7 et
ERR233351 Sensitive lineage1.1.2 et
ERR1200604 Sensitive lineage7 et
ERR1200624 Sensitive lineage7 et
ERR233352 Sensitive lineage4.1.2.1 None
ERR1200623 Sensitive lineage7 et
ERR1200628 Sensitive lineage4.1.2.1 None
ERR233350 MDR-TB lineage4.2.2.2 et
ERR233366 Sensitive lineage6 None
ERR233365 Sensitive lineage1.1.1.1 vn
ERR1200627 Sensitive lineage4.3.3 et
SRR5535789 Sensitive lineage4.3.3 None
SRR5535817 Sensitive lineage4.3.3 None
ERR1200632 Sensitive lineage1.1.3.1 et
ERR233370 Other lineage2.2.1 None
SRR6045555 HR-TB None
SRR6044835 Sensitive lineage4 None
SRR6046133 HR-TB None
ERR1200626 Sensitive lineage1.1.2 et