Rv0010c - c.-47G>T


Drug resistance types
62 Sensitive 5 RR-TB 4 HR-TB 53 MDR-TB 34 Pre-XDR-TB 3 XDR-TB 16 Other
lineage Counts
lineage Count
lineage4.8 15
lineage4.3.3 3
lineage2.2.1 56
lineage3 8
lineage3.1.2 21
lineage4.3.2.1 10
lineage4.1.2.1 8
lineage1.1.2 6
lineage4.1.1.1 11
lineage5.1.1 1
lineage4.1.2 3
lineage3.1.2;lineage4.3.3 1
lineage4.6.1.2 1
lineage1.2.1.2.1 1
lineage1;lineage3.1.1;lineage4.2.2.2 1
lineage4.3.2 1
lineage4.3.4.2.1 2
lineage4.5 4
lineage4.4.1.1 1
lineage1.2.2.2 1
lineage2.2.1.1 3
lineage2.2.1.2 3
lineage1.1.2;lineage3.1.1;lineage4.6.1.1 1
lineage4.3.4.2 3
lineage2.2.1;lineage3 1
lineage1;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 1
lineage4.3 2
lineage4.2.2 1
lineage1.2.2.2;lineage3.1.2 1
lineage4.2.1 2
lineage4.4.2 1
lineage2.2.2 1
lineage1.1.2;lineage2 1
lineage3.1.2.1 1
spoligotype Counts
spoligotype Count
None 177
Geographic prevalence
Country level data for this variant is available for 50 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR14782426 Sensitive lineage4.8 None
SRR28514708 Sensitive lineage4.3.3 None
ERR11775780 MDR-TB lineage2.2.1 None
SRR28045937 Pre-XDR-TB lineage3 None
SRR28351585 Pre-XDR-TB lineage3.1.2 None
SAMN02586021 MDR-TB lineage4.3.2.1 za
ERR4800501 MDR-TB lineage3.1.2 in
SRR25515647 Pre-XDR-TB lineage2.2.1 None
ERR4553450 MDR-TB lineage2.2.1 None
SRR2101320 Sensitive lineage2.2.1 None
ERR9121446 Sensitive lineage4.1.2.1 None
SRR21689943 Sensitive lineage4.1.2.1 None
ERR10849242 Sensitive lineage4.8 None
SRR24223002 Sensitive lineage4.8 None
ERR4797037 Pre-XDR-TB lineage3.1.2 None
SRR21689441 Sensitive lineage4.1.2.1 None
ERR4799756 MDR-TB lineage3.1.2 in
SRR12882542 Sensitive lineage1.1.2 None
ERR4796779 Pre-XDR-TB lineage3.1.2 in
SRR1173210 HR-TB lineage4.3.2.1 None
ERR11798544 MDR-TB lineage2.2.1 None
ERR4819402 Sensitive lineage4.1.1.1 gb
ERR2513405 Other lineage2.2.1 None
SRR24222992 Sensitive lineage4.8 None
SRR1196540 MDR-TB lineage4.3.2.1 None
SRR11662558 MDR-TB lineage2.2.1 None
SRR2100670 Other lineage2.2.1 None
ERR3170422 Sensitive lineage5.1.1 gh
SRR27450057 Sensitive lineage3 None
SRR21690140 Other lineage2.2.1 None
SRR10397136 Pre-XDR-TB lineage2.2.1 None
SRR26112281 Sensitive lineage2.2.1 None
ERR2513193 Sensitive lineage4.1.1.1 gb
ERR5865945 Pre-XDR-TB lineage2.2.1 None
SRR5065343 Other lineage2.2.1 vn
ERR5866376 Pre-XDR-TB lineage2.2.1 None
ERR5865885 MDR-TB lineage2.2.1 None
ERR2446199 Other lineage4.1.2 nl
ERR4799994 Pre-XDR-TB lineage3.1.2;lineage4.3.3 None
ERR4818958 Sensitive lineage4.1.1.1 gb
SRR13232454 MDR-TB lineage2.2.1 None
ERR4800192 MDR-TB lineage3.1.2 in
ERR230045 Other lineage2.2.1 None
ERR5865790 MDR-TB lineage2.2.1 None
ERR2653156 MDR-TB lineage4.3.3 None
ERR4821578 Sensitive lineage4.1.2.1 None
ERR2707174 MDR-TB lineage4.6.1.2 cd
ERR2517563 Other lineage4.1.2 nl
ERR553192_ERR553191 MDR-TB lineage2.2.1 None
SRR12006588 RR-TB lineage1.2.1.2.1 None
SRR7069549 Sensitive lineage3.1.2 None
SRR19428540 Other lineage1;lineage3.1.1;lineage4.2.2.2 None
SRR1184361 MDR-TB lineage4.3.2.1 None
ERR4797531 Pre-XDR-TB lineage3.1.2 in
ERR4799881 Sensitive lineage1.1.2 in
SRR28044509 MDR-TB lineage1.1.2 None
SRR28351377 MDR-TB lineage2.2.1 None
SRR25515688 Sensitive lineage2.2.1 None
SRR28119738 Pre-XDR-TB lineage2.2.1 None
ERR2516520 Sensitive lineage4.3.2 pe
SRR7070447 Sensitive lineage4.1.1.1 None
ERR9992705 XDR-TB lineage4.3.4.2.1 None
ERR5866377 RR-TB lineage2.2.1 None
SRR21689615 Sensitive lineage4.8 None
ERR10465775 Sensitive lineage3 None
ERR4797430 Sensitive lineage3 in
SRR12882469 Sensitive lineage1.1.2 None
ERR5866392 Pre-XDR-TB lineage2.2.1 None
SRR20969661 Sensitive lineage4.5 None
ERR3276076 Sensitive lineage4.8 nl
ERR2515451 Sensitive lineage4.4.1.1 za
SRR1735582 Sensitive lineage2.2.1 None
ERR4798378 Pre-XDR-TB lineage3.1.2 in
SAMN02585986 MDR-TB lineage4.3.2.1 za
ERR8774581 Pre-XDR-TB lineage2.2.1 None
ERR9992657 XDR-TB lineage4.3.4.2.1 None
ERR4811885 Sensitive lineage4.3.3 pe
ERR4818650 Sensitive lineage4.1.1.1 gb
ERR4798401 MDR-TB lineage1.2.2.2 in
ERR2514899 Sensitive lineage4.1.1.1 gb
SRR6257026 MDR-TB lineage2.2.1 None
SRR21690171 Sensitive lineage4.8 None
ERR7911186 RR-TB lineage2.2.1.1 vn
SRR25206946 MDR-TB lineage2.2.1.2 None
ERR553191 MDR-TB lineage2.2.1 None
ERR5865359 MDR-TB lineage2.2.1 None
ERR4799050 Pre-XDR-TB lineage3.1.2 None
SRR23310891 MDR-TB lineage2.2.1 None
SRR26937144 RR-TB lineage2.2.1.1 None
SRR21690805 Sensitive lineage4.8 None
SRR19392723 Sensitive lineage1.1.2;lineage3.1.1;lineage4.6.1.1 None
ERR551812 Other lineage4.3.4.2 None
ERR4827770 Sensitive lineage2.2.1;lineage3 None
SRR6257072 Pre-XDR-TB lineage2.2.1 None
ERR5865789 MDR-TB lineage2.2.1 None
ERR4797906 HR-TB lineage3.1.2 in
SRR7516305 Pre-XDR-TB lineage2.2.1 None
ERR4800585 Pre-XDR-TB lineage3.1.2 in
SAMEA2535200 MDR-TB lineage2.2.1 uz
SRR1735581 Sensitive lineage2.2.1 None
ERR234630 MDR-TB lineage2.2.1 ru
ERR4799874 Pre-XDR-TB lineage3.1.2 in
SRR24222998 Sensitive lineage4.8 None
SRR19415697 Other lineage1;lineage2.2.1;lineage3.1.1;lineage4.2.2.2 None
SRR25628553 MDR-TB lineage4.5 None
ERR4798685 XDR-TB lineage3.1.2 in
SRR25206859 MDR-TB lineage4.5 None
DRR474051 Other lineage2.2.1 None
ERR11082236 MDR-TB lineage4.8 None
SRR5153323 MDR-TB lineage2.2.1 None
ERR6866257 Sensitive lineage4.3 None
DRR473699 Sensitive lineage4.2.2 None
SRR7070302 Sensitive lineage4.1.1.1 None
SRR24223000 Sensitive lineage4.8 None
ERR1193842 Pre-XDR-TB lineage4.3 iq
SRR3724960 Sensitive lineage4.8 pe
ERR5866393 Pre-XDR-TB lineage2.2.1 None
SRR28044511 MDR-TB lineage1.1.2 None
SRR28393276 Pre-XDR-TB lineage4.3.4.2 None
SRR28044510 MDR-TB lineage1.1.2 None
ERR2510309 MDR-TB lineage3 pk
SRR21689944 Sensitive lineage4.1.2.1 None
SRR21690052 Sensitive lineage4.8 None
ERR4798032 Pre-XDR-TB lineage3.1.2 in
SRR6832761 Sensitive lineage4.8 None
ERR5866460 MDR-TB lineage2.2.1 None
ERR4195241 Sensitive lineage4.1.2.1 None
SRR16087953 MDR-TB lineage2.2.1 None
SRR6797338 Other lineage2.2.1.2 None
SRR1196572 MDR-TB lineage4.3.2.1 None
SRR7070578 Sensitive lineage4.1.1.1 None
ERR2517123 MDR-TB lineage3.1.2 gb
DRR474066 Other lineage2.2.1 None
SRR23862134 Sensitive lineage4.8 None
ERR2307603 MDR-TB lineage2.2.1 None
ERR2516480 Pre-XDR-TB lineage4.3.4.2 pe
SRR1173516 MDR-TB lineage4.3.2.1 None
ERR11798545 MDR-TB lineage2.2.1 None
SRR1735579 Sensitive lineage2.2.1 None
ERR4799912 Pre-XDR-TB lineage1.2.2.2;lineage3.1.2 in
ERR4816277 Sensitive lineage4.2.1 None
ERR5866375 MDR-TB lineage2.2.1 None
ERR2514695 Sensitive lineage3.1.2 gb
SRR14801384 HR-TB lineage4.2.1 None
ERR4799976 Pre-XDR-TB lineage3.1.2 in
ERR4819947 Sensitive lineage4.1.1.1 None
SRR10040547 MDR-TB lineage4.4.2 None
ERR2512978 Sensitive lineage3 gb
DRR130165 Pre-XDR-TB lineage2.2.2 None
SRR7069019 Sensitive lineage4.1.1.1 None
SRR16370553 RR-TB lineage2.2.1.1 None
ERR3275224 Other lineage4.1.2 nl
ERR4822392 Pre-XDR-TB lineage2.2.1 kg
SRR26112131 HR-TB lineage2.2.1 None
ERR4800344 Pre-XDR-TB lineage3.1.2 in
ERR5865358 MDR-TB lineage2.2.1 None
ERR4811301 MDR-TB lineage2.2.1.2 cn
ERR9125872 Other lineage3 None
ERR4796673 Pre-XDR-TB lineage3.1.2 in
SRR25515684 Sensitive lineage2.2.1 None
SRR7516304 Pre-XDR-TB lineage2.2.1 None
SRR1175091 MDR-TB lineage4.3.2.1 None
SRR23340154 Pre-XDR-TB lineage2.2.1 None
ERR7902646 Sensitive lineage1.1.2;lineage2 None
ERR4195437 Sensitive lineage4.1.2.1 None
ERR234562 MDR-TB lineage2.2.1 ru
ERR11043744 Sensitive lineage3.1.2.1 None
SRR16058460 Other lineage3 None
ERR5866461 MDR-TB lineage2.2.1 None
ERR4800594 Pre-XDR-TB lineage3.1.2 in
ERR5866391 Pre-XDR-TB lineage2.2.1 None
SRR1184355 MDR-TB lineage4.3.2.1 None
SRR1173001 MDR-TB lineage4.3.2.1 None
SRR21689946 Sensitive lineage4.1.2.1 None
ERR2513969 Sensitive lineage4.1.1.1 gb
SRR11033651 MDR-TB lineage2.2.1 None
SRR25628554 MDR-TB lineage4.5 None