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SRA data
Rv0486
- c.348C>A
Drug resistance types
1 Sensitive
1 RR-TB
4 HR-TB
3 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
5 Other
lineage Counts
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lineage
Count
lineage
Count
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
lineage2.2.1
1
La3
1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
1
La3;M.canetti;lineage2.2.1
1
lineage2.1
1
M.canetti;lineage2.1;lineage4.9
1
La3;lineage4.9
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
15
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR736859
HR-TB
M.canetti;lineage2.1;lineage4.9
None
SRR1172728
RR-TB
La3
None
SRR1173629
Other
lineage2.1;lineage4.9
None
SRR1184372
MDR-TB
None
SRR19304036
Other
La3;lineage2.1;lineage4.9;lineage6.3
None
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