lineage | Count |
---|---|
lineage4.9 | 102 |
lineage2.2.1.1 | 1 |
lineage4.1.2.1 | 1 |
lineage4.8 | 7 |
lineage2.2.1 | 18 |
1 | |
lineage4.1.1.3 | 2 |
lineage3 | 2 |
lineage4.6.1 | 1 |
La1.8.1 | 2 |
lineage4.9;La1.3 | 1 |
lineage4 | 1 |
lineage4;lineage2.2.2 | 1 |
spoligotype | Count |
---|---|
None | 140 |
ID | Drug resistance | Lineage | Country iso2 | SRR13861154 | RR-TB | lineage4.9 | None | SRR13861140 | MDR-TB | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR13861138 | RR-TB | lineage4.9 | None | SRR13861149 | RR-TB | lineage4.9 | None | SRR13861199 | RR-TB | lineage4.9 | None | SRR13861169 | RR-TB | lineage4.9 | None | SRR13861182 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861196 | RR-TB | lineage4.9 | None | SRR13861170 | RR-TB | lineage4.9 | None | SRR13861178 | RR-TB | lineage4.9 | None | SRR13861202 | RR-TB | lineage4.9 | None | SRR13861232 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861233 | RR-TB | lineage4.9 | None | SRR13861245 | RR-TB | lineage4.9 | None | SRR13861236 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861276 | RR-TB | lineage4.9 | None | SRR13861255 | RR-TB | lineage4.9 | None | SRR13861262 | RR-TB | lineage4.9 | None | SRR13861274 | RR-TB | lineage4.9 | None | SRR13861320 | RR-TB | lineage4.9 | None | SRR13861310 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861284 | RR-TB | lineage4.9 | None | SRR13861292 | RR-TB | lineage4.9 | None | SRR13861299 | RR-TB | lineage4.9 | None | SRR13861316 | RR-TB | lineage4.9 | None | SRR13861337 | RR-TB | lineage4.9 | None | SRR13861346 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861355 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861357 | RR-TB | lineage4.9 | None | SRR13861366 | RR-TB | lineage4.9 | None | SRR13861408 | MDR-TB | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861378 | RR-TB | lineage4.9 | None | SRR13861406 | MDR-TB | lineage4.9 | None | SRR13861410 | MDR-TB | lineage4.9 | None | SRR13861446 | RR-TB | lineage4.9 | None | SRR13861437 | RR-TB | lineage4.9 | None | SRR13861443 | RR-TB | lineage4.9 | None | SRR13861440 | RR-TB | lineage4.9 | None | SRR13861450 | RR-TB | lineage4.9 | None | SRR13861451 | RR-TB | lineage4.9 | None | SRR13861458 | MDR-TB | lineage4.9 | None | SRR13861454 | RR-TB | lineage4.9 | None | SRR13861465 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861475 | RR-TB | lineage4.9 | None | SRR13861491 | RR-TB | lineage4.9 | None | SRR13861484 | RR-TB | lineage4.9 | None | SRR13861488 | RR-TB | lineage4.9 | None | SRR13861498 | RR-TB | lineage4.9 | None | SRR13861495 | MDR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861513 | RR-TB | lineage4.9 | None | SRR13861524 | RR-TB | lineage4.9 | None | SRR13861530 | RR-TB | lineage4.9 | None | SRR13861543 | RR-TB | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861508 | RR-TB | lineage4.9 | None | SRR13861517 | RR-TB | lineage4.9 | None | SRR13861520 | RR-TB | lineage4.9 | None | SRR13861542 | RR-TB | lineage4.9 | None | SRR13861547 | RR-TB | lineage4.9 | None | SRR13861560 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861565 | RR-TB | lineage4.9 | None | SRR13861589 | RR-TB | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR13861585 | RR-TB | lineage4.9 | None | SRR13861590 | RR-TB | lineage4.9 | None | SRR13861599 | RR-TB | lineage4.9 | None | SRR13861603 | RR-TB | lineage4.9 | None | SRR13861588 | RR-TB | lineage4.9 | None | SRR13861618 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861686 | RR-TB | lineage4.9 | None | SRR13861678 | RR-TB | lineage4.9 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861662 | RR-TB | lineage4.9 | None | SRR13861703 | RR-TB | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861701 | RR-TB | lineage4.9 | None | SRR13861722 | RR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR13861713 | RR-TB | lineage4.9 | None | SRR13861724 | RR-TB | lineage4.9 | None | SRR13861737 | RR-TB | lineage4.9 | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR13861735 | MDR-TB | lineage4.9 | None | SRR15661588 | MDR-TB | lineage2.2.1.1 | None | ERR2027233 | RR-TB | lineage4.1.2.1 | None | SAMEA3501065 | RR-TB | lineage4.8 | None | SAMN02360548 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02360621 | Pre-XDR-TB | lineage2.2.1 | kr | SAMN02360549 | Pre-XDR-TB | lineage2.2.1 | kr | ERR1034791 | RR-TB | None | SAMEA3501067 | RR-TB | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR2228900 | RR-TB | lineage4.8 | None | ERR2513382 | RR-TB | lineage4.1.1.3 | None | SAMN02360622 | Pre-XDR-TB | lineage2.2.1 | kr | ERR2513780 | MDR-TB | lineage3 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | SRR5709797 | Pre-XDR-TB | lineage2.2.1 | th | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR4828879 | MDR-TB | lineage3 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR1003102 | Pre-XDR-TB | lineage2.2.1 | None | ERR4188372 | RR-TB | La1.8.1 | None | ERR4769502 | RR-TB | lineage4.9;La1.3 | None | ERR751392 | MDR-TB | lineage4.1.1.3 | pe | ERR4187604 | RR-TB | La1.8.1 | None | ERR4810925 | Pre-XDR-TB | lineage4 | cn | SRR1003100 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003099 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013537 | Pre-XDR-TB | lineage2.2.1 | None | SRR1003103 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048835 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013540 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048836 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013538 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013539 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1048839 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048838 | Pre-XDR-TB | lineage2.2.1 | None | SRR1174307 | Pre-XDR-TB | lineage2.2.1 | None |
---|