Rv0667 - p.Ser441Leu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
48 RR-TB
0 HR-TB
148 MDR-TB
42 Pre-XDR-TB
4 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 21 |
| lineage4.6.1.1;lineage4.7 | 1 |
| lineage4.8 | 9 |
| lineage2.2.1.1 | 2 |
| lineage2.2.1 | 66 |
| lineage1.1.2 | 20 |
| lineage4.1.2.1 | 22 |
| lineage4.4.1.1 | 13 |
| lineage4 | 2 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2 | 1 |
| lineage3 | 7 |
| lineage4.1.4 | 2 |
| lineage1.1.3 | 2 |
| lineage4.4.2 | 3 |
| lineage4.6.2.2 | 3 |
| lineage4.5 | 10 |
| lineage1.2.1.2 | 3 |
| lineage4.2.1.1 | 2 |
| lineage1.2.1.2.1 | 5 |
| lineage4.3.4.2 | 2 |
| lineage4.6.1.2 | 1 |
| lineage3.1.2.1 | 3 |
| lineage1.1.3.1 | 2 |
| lineage4.1.3 | 7 |
| lineage4.3.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.6.5 | 2 |
| lineage3.1.1 | 1 |
| lineage4.3.4.1 | 2 |
| lineage2.2.2;lineage4.1.2.1 | 1 |
| lineage4.7 | 3 |
| lineage4.1 | 1 |
| lineage1.2.2.2 | 5 |
| lineage4.9 | 2 |
| lineage2.2.2 | 2 |
| lineage4.4.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage5.1.5 | 1 |
| lineage6.2.3 | 1 |
| lineage3;lineage4.5 | 1 |
| lineage1.1.1 | 2 |
| lineage4.8.1 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 242 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4813927 | MDR-TB | lineage4.3.3 | None | ERR6359138 | MDR-TB | lineage4.6.1.1;lineage4.7 | None | ERR6362046 | RR-TB | lineage4.8 | None | ERR4811296 | MDR-TB | lineage2.2.1.1 | cn | ERR7911316 | MDR-TB | lineage2.2.1 | vn | ERR10610238 | RR-TB | lineage2.2.1 | None | SRR1172181 | MDR-TB | lineage1.1.2 | None | SRR1643010 | RR-TB | lineage4.1.2.1 | None | ERR5987205 | RR-TB | lineage4.4.1.1 | None | ERR11138645 | MDR-TB | lineage4 | None | SRR7898227 | Pre-XDR-TB | lineage1.1.2 | in | ERR2677443 | RR-TB | lineage4.4.1.1 | de | SRR5709823 | Pre-XDR-TB | lineage2.2.1 | th | SRR5710020 | Pre-XDR-TB | lineage2.2.1 | th | SRR5817466 | MDR-TB | lineage4.2.2.2 | au | ERR13291066 | MDR-TB | lineage4.1.2 | None | DRR130194 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341235 | Pre-XDR-TB | lineage3 | in | ERR4872113 | RR-TB | lineage4.1.4 | None | SRR11662704 | MDR-TB | lineage1.1.3 | None | SRR1169051 | MDR-TB | lineage4.3.3 | None | SRR25514981 | Pre-XDR-TB | lineage4.4.2 | None | ERR9806801 | RR-TB | lineage2.2.1 | None | ERR2653155 | MDR-TB | lineage4.1.2.1 | None | ERR10680141 | MDR-TB | lineage4.6.2.2 | None | SRR18002900 | Pre-XDR-TB | lineage2.2.1 | None | SRR1166307 | MDR-TB | lineage4.3.3 | None | ERR10680136 | MDR-TB | lineage2.2.1 | None | SRR1183039 | MDR-TB | lineage1.1.2 | None | DRR130116 | MDR-TB | lineage2.2.1 | None | ERR2515356 | RR-TB | lineage2.2.1 | za | SRR833176 | MDR-TB | lineage4.4.1.1 | None | SRR25207110 | XDR-TB | lineage2.2.1 | None | SRR22424763 | MDR-TB | lineage1.1.2 | None | SRR11662570 | Pre-XDR-TB | lineage2.2.1 | None | ERR1227519 | RR-TB | lineage4.1.2.1 | None | SRR833079 | MDR-TB | lineage4.4.1.1 | None | SRR1723803 | Pre-XDR-TB | lineage2.2.1 | cn | SRR21576659 | Pre-XDR-TB | lineage4.5 | None | ERR5987295 | RR-TB | lineage4.4.1.1 | None | SRR21576545 | RR-TB | lineage4.4.2 | None | ERR13290994 | MDR-TB | lineage1.2.1.2 | None | ERR4830888 | Pre-XDR-TB | lineage2.2.1 | None | ERR4553691 | MDR-TB | lineage2.2.1 | None | ERR13265732 | MDR-TB | lineage4.5 | None | SRR12142409 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290822 | Pre-XDR-TB | lineage4.5 | None | SRR1166089 | MDR-TB | lineage4.3.3 | None | ERR13258508 | MDR-TB | lineage2.2.1 | None | ERR550732 | MDR-TB | lineage2.2.1 | None | SRR10809086 | RR-TB | lineage4.8 | None | SRR6485022 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR1172225 | MDR-TB | lineage1.1.2 | None | DRR130094 | MDR-TB | lineage1.2.1.2.1 | None | SRR24709900 | MDR-TB | lineage2.2.1 | None | ERR13232477 | MDR-TB | lineage2.2.1 | None | SRR8649112 | MDR-TB | lineage4.3.3 | None | ERR13260317 | MDR-TB | lineage4.3.4.2 | None | ERR13267494 | MDR-TB | lineage4.5 | None | SRR29772445 | MDR-TB | lineage1.1.2 | None | SRR1643050 | RR-TB | lineage4.1.2.1 | None | ERR4822361 | MDR-TB | lineage1.2.1.2.1 | None | ERR1034887 | MDR-TB | lineage4.6.1.2 | pt | ERR13284557 | MDR-TB | lineage4.1.2.1 | None | ERR1227515 | RR-TB | lineage4.1.2.1 | None | SRR29772419 | RR-TB | lineage1.1.2 | None | SRR29772695 | MDR-TB | lineage3.1.2.1 | None | SAMN02584645 | MDR-TB | lineage4.3.3 | md | SRR1169590 | MDR-TB | lineage1.1.2 | None | SRR671765 | MDR-TB | lineage2.2.1 | cn | ERR751767 | MDR-TB | lineage2.2.1 | th | ERR12115310 | MDR-TB | lineage1.1.3.1 | None | SRR998847 | MDR-TB | lineage4.1.3 | None | ERR4830685 | MDR-TB | lineage4.3.2 | dz | ERR4829115 | RR-TB | lineage4.6.2.2 | ng | ERR11080918 | MDR-TB | lineage4.1.2.1 | None | SRR1723485 | MDR-TB | lineage2.2.1 | None | SAMEA2533430 | MDR-TB | lineage2.2.1 | uz | ERR2516459 | MDR-TB | lineage2.2.1 | nl | ERR2515329 | RR-TB | lineage4.9.1 | za | SRR6824294 | MDR-TB | lineage2.2.1 | cn | SRR6824329 | MDR-TB | lineage2.2.1 | cn | SRR6824443 | MDR-TB | lineage2.2.1 | cn | SRR6824503 | MDR-TB | lineage2.2.1 | cn | SRR6824382 | RR-TB | lineage2.2.1 | cn | SRR1643051 | RR-TB | lineage4.1.2.1 | None | SAMN01828248 | MDR-TB | lineage4.4.1.1 | za | ERR9120060 | RR-TB | lineage4.4.1.1 | None | SRR29081602 | MDR-TB | lineage4.3.3 | None | ERR1227518 | RR-TB | lineage4.1.2.1 | None | SRR3205962 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206951 | MDR-TB | lineage2.2.1.1 | None | SRR29017326 | MDR-TB | lineage4.3.3 | None | ERR9120061 | RR-TB | lineage4.4.1.1 | None | SRR833008 | MDR-TB | lineage4.4.1.1 | None | ERR6866719 | RR-TB | lineage4.8 | None | SRR10306012 | MDR-TB | lineage2.2.1 | None | ERR550733 | MDR-TB | lineage2.2.1 | None | SRR12006579 | RR-TB | lineage1.2.1.2 | None | SRR10380135 | MDR-TB | lineage4.3.3 | None | SRR25207109 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810623 | Pre-XDR-TB | lineage2.2.1 | cn | ERR3256235 | MDR-TB | lineage1.2.1.2.1 | ph | ERR11044236 | Pre-XDR-TB | lineage4.6.5 | None | ERR11798642 | MDR-TB | lineage4.3.3 | None | ERR2652994 | MDR-TB | lineage4.1.2.1 | None | ERR4596909 | MDR-TB | lineage3.1.1 | None | SRR28044342 | Pre-XDR-TB | lineage3 | None | SRR1723460 | MDR-TB | lineage2.2.1 | cn | SRR15368785 | MDR-TB | lineage4.5 | None | ERR3256263 | MDR-TB | lineage4.3.4.1 | ph | SRR15316303 | MDR-TB | lineage2.2.1 | None | ERR13260895 | Pre-XDR-TB | lineage2.2.2;lineage4.1.2.1 | None | SRR15014716 | MDR-TB | lineage4.7 | None | ERR10679996 | MDR-TB | lineage4.1 | None | ERR9119519 | RR-TB | lineage4.1.4 | None | ERR8773720 | RR-TB | lineage2.2.1 | None | SRR12420447 | MDR-TB | lineage2.2.1 | None | ERR1227521 | RR-TB | lineage4.1.2.1 | None | ERR2600598 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR29772674 | MDR-TB | lineage4.1.2.1 | None | SRR833073 | MDR-TB | lineage4.4.1.1 | None | SRR10185941 | MDR-TB | lineage4.3.4.1 | None | SRR1169085 | MDR-TB | lineage4.3.3 | None | ERR13285137 | MDR-TB | lineage1.2.2.2 | None | SRR25207028 | MDR-TB | lineage4.4.2 | None | ERR13276228 | Pre-XDR-TB | lineage4.6.5 | None | SRR29772478 | RR-TB | lineage1.1.2 | None | ERR8773718 | RR-TB | lineage2.2.1 | None | ERR4827740 | Pre-XDR-TB | lineage2.2.1 | None | SRR29016961 | MDR-TB | lineage4.3.3 | None | SRR18665444 | MDR-TB | lineage4.1.2.1 | None | SRR29080997 | MDR-TB | lineage1.2.1.2.1 | None | ERR11082308 | MDR-TB | lineage4.1.3 | None | SRR10828628 | MDR-TB | lineage1.1.3 | None | ERR13290887 | MDR-TB | lineage1.2.1.2 | None | SAMN03246244 | MDR-TB | lineage2.2.1 | cn | SRR998845 | MDR-TB | lineage4.1.3 | None | ERR2510609 | RR-TB | lineage3 | pk | ERR4796876 | MDR-TB | lineage3.1.2.1 | in | SRR1643048 | RR-TB | lineage4.1.2.1 | None | SRR15316022 | MDR-TB | lineage2.2.1 | None | SRR10828185 | Pre-XDR-TB | lineage2.2.1 | None | ERR550733_ERR550732 | MDR-TB | lineage2.2.1 | None | SRR1643049 | RR-TB | lineage4.1.2.1 | None | SRR9971093 | RR-TB | lineage4.8 | None | ERR13260353 | MDR-TB | lineage2.2.1 | None | SRR5485582 | RR-TB | lineage4.9 | None | ERR13284939 | MDR-TB | lineage4.1.2.1 | None | ERR4799461 | MDR-TB | lineage3.1.2.1 | in | SAMN02598987 | MDR-TB | lineage1.1.2 | in | SAMN02584629 | MDR-TB | lineage4.3.3 | md | ERR13195616 | Pre-XDR-TB | lineage2.2.2 | None | SRR9613553 | MDR-TB | lineage4.8 | None | SRR1169528 | MDR-TB | lineage1.1.2 | None | SRR28394210 | Pre-XDR-TB | lineage4.7 | None | SRR28351527 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4829863 | MDR-TB | lineage4.4.1.2 | it | ERR4822581 | MDR-TB | lineage4.2.1 | tm | ERR4829879 | MDR-TB | lineage4.3.3 | it | SRR833055 | MDR-TB | lineage4.4.1.1 | None | ERR10748270 | MDR-TB | lineage4.1.1.3 | None | ERR1215480 | MDR-TB | lineage5.1.5 | gh | ERR2517025 | MDR-TB | lineage4.6.2.2 | gb | SRR5709873 | MDR-TB | lineage2.2.1 | th | SRR5709802 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709935 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709928 | Pre-XDR-TB | lineage2.2.1 | th | SRR5341321 | Pre-XDR-TB | lineage3 | in | SRR6824483 | Pre-XDR-TB | lineage2.2.1 | cn | ERR13284737 | MDR-TB | lineage4.1.3 | None | ERR10679993 | MDR-TB | lineage6.2.3 | None | SRR26937129 | MDR-TB | lineage2.2.1 | None | SRR29017436 | MDR-TB | lineage1.1.3.1 | None | SRR29093094 | Pre-XDR-TB | lineage2.2.2 | None | SRR29093558 | RR-TB | lineage4.8 | None | SRR29055366 | RR-TB | lineage4.4.1.1 | None | ERR4827626 | MDR-TB | lineage2.2.1 | None | SRR28046123 | Pre-XDR-TB | lineage2.2.1 | None | SRR14088376 | MDR-TB | lineage3 | None | SRR1049975 | MDR-TB | lineage4.1.3 | None | SRR29772621 | MDR-TB | lineage4.3.4.2 | None | SRR25207285 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810622 | XDR-TB | lineage2.2.1 | cn | ERR4829960 | MDR-TB | lineage3;lineage4.5 | pk | SRR8791250 | RR-TB | lineage4.9 | None | SRR11662343 | MDR-TB | lineage2.2.1 | None | ERR2984793 | MDR-TB | lineage1.2.2.2 | None | SRR16157102 | RR-TB | lineage4.4.1.1 | None | SRR28394190 | MDR-TB | lineage4 | None | SRR998846 | MDR-TB | lineage4.1.3 | None | SRR22424898 | MDR-TB | lineage1.1.2 | None | ERR1394280 | Pre-XDR-TB | lineage1.1.2 | None | SRR1723857 | MDR-TB | lineage2.2.1 | cn | SRR29273684 | MDR-TB | lineage4.3.3 | None | SRR20139553 | MDR-TB | lineage4.8 | None | SRR1723484 | MDR-TB | lineage2.2.1 | None | SRR11662218 | MDR-TB | lineage1.1.1 | None | SRR1180454 | MDR-TB | lineage1.1.2 | None | ERR13291139 | Pre-XDR-TB | lineage4.5 | None | ERR13253330 | XDR-TB | lineage4.5 | None | SRR29093367 | MDR-TB | lineage4.5 | None | ERR13254204 | MDR-TB | lineage1.2.1.2.1 | None | SRR1166193 | MDR-TB | lineage4.3.3 | None | SRR12142448 | Pre-XDR-TB | lineage2.2.1 | None | SRR25340883 | MDR-TB | lineage1.1.2 | None | SRR29772639 | Pre-XDR-TB | lineage1.1.2 | None | SRR29681265 | RR-TB | lineage4.1.2.1 | None | ERR11080979 | MDR-TB | lineage4.3.3 | None | DRR130059 | XDR-TB | lineage4.5 | None | ERR9907728 | RR-TB | lineage4.8.1 | None | SRR29231047 | RR-TB | lineage4.1.2.1 | None | SRR29772453 | RR-TB | lineage1.1.2 | None | ERR13284944 | MDR-TB | lineage4.3.3 | None | SRR10305970 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260421 | RR-TB | lineage4.1.2.1 | None | ERR11043530 | MDR-TB | lineage1.2.2.2 | None | ERR13260057 | MDR-TB | lineage2.2.1 | None | SRR10851669 | RR-TB | lineage4.1.2.1 | None | SRR29772803 | Pre-XDR-TB | lineage1.2.2.2 | None | SRR1180255 | MDR-TB | lineage1.1.2 | None | SRR29274239 | RR-TB | lineage4.7 | None | SRR6480440 | RR-TB | lineage4.8 | None | ERR2510619 | Pre-XDR-TB | lineage3 | pk | SRR29017596 | MDR-TB | lineage2.2.1 | None | ERR4796565 | MDR-TB | lineage3 | in | ERR13265945 | MDR-TB | lineage4.5 | None | SRR998848 | MDR-TB | lineage4.1.3 | None | ERR10748487 | MDR-TB | lineage4.1.1.3 | None | ERR1227520 | RR-TB | lineage4.1.2.1 | None | SRR1180296 | MDR-TB | lineage1.1.2 | None | SRR9738534 | MDR-TB | lineage4.3.3 | None | ERR3509864 | MDR-TB | lineage4.3.4.2.1 | None | SRR25206858 | MDR-TB | lineage2.2.1 | None | ERR11044279 | MDR-TB | lineage4.1.2.1 | None | ERR11489032 | MDR-TB | lineage2.2.1 | None | SRR11662626 | MDR-TB | lineage1.1.1 | None | ERR553212 | RR-TB | lineage4.8 | None | SAMN02598992 | MDR-TB | lineage1.1.2 | in | SAMN02584606 | MDR-TB | lineage4.3.3 | md | ERR752191 | MDR-TB | lineage2.2.1 | th | SRR1168962 | MDR-TB | lineage4.3.3 | None |
|---|
