Rv0668 - c.2824_2826delCAAinsGG


Drug resistance types
0 Sensitive 4 RR-TB 22 HR-TB 5 MDR-TB 1 Pre-XDR-TB 1 XDR-TB 33 Other
lineage Counts
lineage Count
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage2.2.1.1 1
lineage2.1;lineage4.9 3
lineage4.1.2.1 5
lineage2.1;lineage4.9;lineage6.3 5
La3;lineage2.1;lineage6.3 1
lineage2.2.2 1
La3;lineage4.9 1
La3;lineage1.1.2 1
lineage4.8 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.1.3 2
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.2.1 1
lineage4.7 1
lineage4.1.1.1 1
6
La1.2.BCG 1
lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.9 5
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
lineage2.2.1;lineage3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1 1
lineage6.1.3 1
lineage4.6.2.2 1
lineage6.3.1 1
M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage6.3 1
lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 66
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR18910194 HR-TB lineage2.2.2 None
SRR26399973 Other La3;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786611 HR-TB lineage4.1.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR1180172 RR-TB lineage2.2.1 None
SRR7496523 Other lineage4.7 None
ERR9786617 Other lineage4.1.1.1 None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR4798262 HR-TB La1.2.BCG None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR6046133 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR26159043 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675457 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR9787165 Other lineage6.1.3 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR9786604 Other None
SRR6789626 Other None
SRR18213713 HR-TB None
ERR9787139 Other lineage6.3.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR3804169 HR-TB lineage4.1.3 None