Rv0668 - p.Glu1033Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
2 HR-TB
177 MDR-TB
45 Pre-XDR-TB
26 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 27 |
| lineage4.4.1.1 | 139 |
| lineage4.8 | 13 |
| lineage4.1.2.1 | 6 |
| lineage2.2.1 | 29 |
| lineage2.2.1;lineage4.1.1 | 1 |
| lineage4.2.2.2 | 3 |
| lineage2.2.2 | 2 |
| lineage4.2.1 | 6 |
| lineage2.2.1.1 | 10 |
| lineage3.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4 | 2 |
| lineage3 | 4 |
| lineage4.3.3 | 2 |
| lineage4.1.1 | 3 |
| 3 | |
| lineage4.3.4.2 | 1 |
| lineage2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 254 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2515474 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9992617 | MDR-TB | lineage4.4.1.1 | None | ERR2516166 | MDR-TB | lineage4.8 | be | ERR9993053 | XDR-TB | lineage4.4.1.1 | None | ERR9992923 | XDR-TB | lineage4.4.1.1 | None | SRR13870398 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR8651572 | Pre-XDR-TB | lineage2.2.1 | cn | SRR10397141 | MDR-TB | lineage2.2.1 | None | SRR28393855 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMEA2534323 | MDR-TB | lineage4.4.1.1 | None | ERR9027252 | MDR-TB | lineage4.4.1.1 | None | ERR4020187 | MDR-TB | lineage4.4.1.1 | None | ERR11488548 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488900 | XDR-TB | lineage4.4.1.1 | None | ERR11488390 | MDR-TB | lineage4.4.1.1 | None | ERR552764 | MDR-TB | lineage4.4.1.1 | None | SRR28394226 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1 | None | SRR28393577 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR13288851 | XDR-TB | lineage2.2.1 | None | SRR8368396 | MDR-TB | lineage2.2.1 | None | SRR29056138 | MDR-TB | lineage4.4.1.1 | None | ERR11488997 | MDR-TB | lineage4.4.1.1 | None | ERR11488890 | XDR-TB | lineage4.4.1.1 | None | ERR11488344 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11080919 | MDR-TB | lineage2.2.1 | None | ERR11488896 | MDR-TB | lineage4.4.1.1 | None | ERR4828981 | RR-TB | lineage2.2.1 | None | SRR29274013 | Pre-XDR-TB | lineage4.8 | None | SRR29093679 | MDR-TB | lineage4.2.2.2 | None | ERR9993022 | XDR-TB | lineage4.4.1.1 | None | SRR10040549 | Pre-XDR-TB | lineage2.2.2 | None | ERR13260900 | XDR-TB | lineage4.4.1.1 | None | ERR11488382 | MDR-TB | lineage4.4.1.1 | None | SAMEA2535221 | MDR-TB | lineage4.4.1.1 | None | SRR9588025 | MDR-TB | lineage4.4.1.1 | None | ERR11488922 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5864323 | MDR-TB | lineage4.2.1 | None | SRR26936940 | MDR-TB | lineage2.2.1 | None | ERR552573 | MDR-TB | lineage4.4.1.1 | None | ERR11488616 | MDR-TB | lineage4.4.1.1 | None | ERR9992916 | XDR-TB | lineage4.4.1.1 | None | SRR25207316 | MDR-TB | lineage2.2.1.1 | None | ERR3794428 | MDR-TB | lineage2.2.1 | None | ERR13276277 | MDR-TB | lineage2.2.1 | None | ERR4798517 | MDR-TB | lineage3.1 | in | ERR11488407 | MDR-TB | lineage4.4.1.1 | None | ERR11488748 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR757176 | MDR-TB | lineage4.1.2.1.1 | ar | SRR14802002 | MDR-TB | lineage2.2.1 | None | ERR3287581 | MDR-TB | lineage4 | pe | ERR4830879 | MDR-TB | lineage4.4.1.1 | sz | ERR4830866 | MDR-TB | lineage4.4.1.1 | sz | ERR9806913 | MDR-TB | lineage2.2.1 | None | ERR552496 | MDR-TB | lineage4.4.1.1 | sz | ERR552518 | MDR-TB | lineage4.1.1.3 | sz | ERR552637 | MDR-TB | lineage4.4.1.1 | sz | ERR552070 | MDR-TB | lineage4.4.1.1 | sz | ERR552484 | MDR-TB | lineage4.4.1.1 | sz | SRR7592378 | Pre-XDR-TB | lineage4.8 | None | SAMEA2534447 | MDR-TB | lineage4.4.1.1 | None | ERR4830854 | MDR-TB | lineage4.4.1.1 | None | ERR4830869 | MDR-TB | lineage4.4.1.1 | None | ERR11488765 | XDR-TB | lineage4.4.1.1 | None | ERR11488963 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4830855 | MDR-TB | lineage4.4.1.1 | None | ERR552878 | HR-TB | lineage4.4.1.1 | None | ERR553243 | MDR-TB | lineage4.4.1.1 | None | SRR7592379 | MDR-TB | lineage4.8 | None | ERR552876 | MDR-TB | lineage4.4.1.1 | None | ERR13260901 | XDR-TB | lineage4.4.1.1 | None | ERR2516025 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR552877 | HR-TB | lineage4.4.1.1 | None | ERR5918020 | XDR-TB | lineage2.2.1 | za | ERR4830838 | Pre-XDR-TB | lineage4.2.2.2 | et | SRR23938664 | MDR-TB | lineage2.2.1 | None | ERR8774352 | MDR-TB | lineage2.2.1 | None | SRR13232445 | MDR-TB | lineage2.2.1 | None | ERR551970 | MDR-TB | lineage4.4.1.1 | None | ERR2200022 | MDR-TB | lineage4.4.1.1 | None | ERR11488345 | MDR-TB | lineage4.1.1.3 | None | ERR11488638 | MDR-TB | lineage4.4.1.1 | None | SRR1723706 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR13093932 | MDR-TB | lineage4.4.1.1 | None | SRR1723707 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR16156226 | MDR-TB | lineage2.2.1 | None | SRR10869304 | Pre-XDR-TB | lineage2.2.1 | None | ERR13260672 | Pre-XDR-TB | lineage4.1.2.1 | None | SRR9588023 | MDR-TB | lineage4.4.1.1 | None | SRR29017046 | MDR-TB | lineage3 | None | SRR9588015 | MDR-TB | lineage4.4.1.1 | None | ERR11138648 | Pre-XDR-TB | lineage2.2.2 | None | ERR4830856 | MDR-TB | lineage4.4.1.1 | None | ERR2199994 | MDR-TB | lineage4.4.1.1 | None | ERR11488884 | XDR-TB | lineage4.4.1.1 | None | ERR11488969 | XDR-TB | lineage4.4.1.1 | None | ERR11488395 | MDR-TB | lineage4.1.1.3 | None | ERR11488763 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR11488886 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10305994 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15600374 | MDR-TB | lineage2.2.1.1 | None | SRR29341511 | MDR-TB | lineage4.4.1.1 | None | ERR5864321 | MDR-TB | lineage4.2.1 | None | SRR9588024 | MDR-TB | lineage4.4.1.1 | None | SRR9588019 | MDR-TB | lineage4.4.1.1 | None | ERR11488857 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4020183 | MDR-TB | lineage4.4.1.1 | None | ERR11488623 | XDR-TB | lineage4.4.1.1 | None | SRR9588026 | MDR-TB | lineage4.4.1.1 | None | ERR13289388 | XDR-TB | lineage4.1.1.3 | None | SRR9588003 | MDR-TB | lineage4.4.1.1 | None | ERR11488958 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR1035285 | MDR-TB | lineage4.3.3 | br | ERR4020186 | MDR-TB | lineage4.4.1.1 | None | ERR9907695 | MDR-TB | lineage4.1.1.3 | None | SRR9738556 | Pre-XDR-TB | lineage4.8 | None | SRR29016821 | MDR-TB | lineage3 | None | SRR11786860 | MDR-TB | lineage2.2.1 | None | SRR29273787 | XDR-TB | lineage4.8 | None | ERR5864322 | MDR-TB | lineage4.2.1 | None | ERR13285755 | MDR-TB | lineage2.2.1 | None | ERR11488787 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR12796605 | MDR-TB | lineage4.4.1.1 | None | SRR28394217 | Pre-XDR-TB | lineage4.1.1 | None | ERR4830857 | MDR-TB | lineage4.4.1.1 | sz | ERR4830860 | MDR-TB | lineage4.4.1.1 | sz | ERR4830864 | MDR-TB | lineage4.4.1.1 | sz | ERR4830876 | MDR-TB | lineage4.4.1.1 | sz | ERR4830873 | MDR-TB | lineage4.4.1.1 | sz | SRR9588013 | MDR-TB | lineage4.4.1.1 | None | SRR9588021 | MDR-TB | lineage4.4.1.1 | None | SRR28393411 | Pre-XDR-TB | lineage4.1.2.1 | None | SAMEA2533722 | MDR-TB | lineage4.8 | uz | SRR6824693 | Pre-XDR-TB | lineage2.2.1.1 | cn | SRR6824696 | Pre-XDR-TB | lineage2.2.1.1 | cn | ERR11488941 | XDR-TB | lineage4.4.1.1 | None | ERR11488380 | XDR-TB | lineage4.4.1.1 | None | ERR4553768 | MDR-TB | None | SRR25206918 | MDR-TB | lineage2.2.1.1 | None | SRR9588020 | MDR-TB | lineage4.4.1.1 | None | ERR4830851 | MDR-TB | lineage4.4.1.1 | None | ERR5864318 | MDR-TB | lineage4.2.1 | None | ERR11488352 | XDR-TB | lineage4.4.1.1 | None | ERR11488657 | XDR-TB | lineage4.4.1.1 | None | ERR11488514 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16370443 | MDR-TB | lineage4.1.1 | None | ERR2677469 | MDR-TB | lineage2.2.1 | de | ERR11488861 | XDR-TB | lineage4.4.1.1 | None | SRR9588011 | MDR-TB | lineage4.4.1.1 | None | ERR11488470 | MDR-TB | lineage4.4.1.1 | None | ERR11488343 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR11488730 | MDR-TB | lineage4.1.1.3 | None | SAMEA2534888 | MDR-TB | lineage4.4.1.1 | None | ERR4831597 | Pre-XDR-TB | lineage2.2.1 | None | ERR9993035 | MDR-TB | lineage4.4.1.1 | None | ERR11488399 | MDR-TB | lineage4.1.1.3 | None | ERR4020184 | MDR-TB | lineage4.4.1.1 | None | ERR9992922 | XDR-TB | lineage4.4.1.1 | None | ERR4830848 | MDR-TB | lineage4.4.1.1 | sz | ERR4830867 | MDR-TB | lineage4.4.1.1 | sz | SRR9588004 | MDR-TB | lineage4.4.1.1 | None | ERR5987303 | Pre-XDR-TB | lineage2.2.1 | None | SRR9588006 | MDR-TB | lineage4.4.1.1 | None | SRR9588007 | MDR-TB | lineage4.4.1.1 | None | ERR1034630 | MDR-TB | lineage4.3.4.2 | None | SRR13180433 | MDR-TB | lineage4.8 | None | SAMEA2534974 | MDR-TB | lineage4.4.1.1 | None | ERR5864320 | MDR-TB | lineage4.2.1 | None | SRR29539154 | MDR-TB | lineage4.3.3 | None | ERR11488951 | XDR-TB | lineage4.4.1.1 | None | ERR13260882 | MDR-TB | lineage4.4.1.1 | None | ERR11488605 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29051204 | MDR-TB | lineage2.2.1 | None | SRR29093855 | Pre-XDR-TB | lineage2.2.1 | None | SAMEA2534740 | MDR-TB | lineage4.4.1.1 | None | SRR29017194 | MDR-TB | lineage3 | None | SRR29052873 | MDR-TB | lineage4.1.1 | None | ERR4020188 | MDR-TB | lineage4.4.1.1 | None | ERR552821 | MDR-TB | lineage4.4.1.1 | None | ERR7737817 | MDR-TB | lineage4.2.2.2 | None | SRR9588018 | MDR-TB | lineage4.4.1.1 | None | SRR10305995 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11488463 | MDR-TB | lineage4.4.1.1 | None | ERR13284829 | RR-TB | lineage4.8 | None | SRR9588014 | MDR-TB | lineage4.4.1.1 | None | ERR11488473 | MDR-TB | lineage4.1.1.3 | None | ERR3273211 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR553222 | MDR-TB | lineage4.4.1.1 | None | ERR551128_ERR551129 | MDR-TB | lineage4.8 | None | ERR4797916 | Pre-XDR-TB | lineage3 | in | ERR552572 | MDR-TB | lineage4.4.1.1 | None | ERR11488791 | MDR-TB | lineage4.4.1.1 | None | ERR5864319 | MDR-TB | lineage4.2.1 | None | ERR4553561 | MDR-TB | None | ERR4830863 | MDR-TB | lineage4.4.1.1 | sz | SAMEA2534689 | MDR-TB | lineage4.4.1.1 | None | SAMEA2535241 | MDR-TB | lineage4.4.1.1 | None | ERR4830861 | MDR-TB | lineage4.4.1.1 | sz | ERR7911101 | MDR-TB | lineage2.2.1 | vn | ERR4828736 | MDR-TB | lineage2.2.1 | None | ERR7911279 | MDR-TB | lineage2.2.1 | vn | SRR9588027 | MDR-TB | lineage4.4.1.1 | None | ERR4830862 | MDR-TB | lineage4.4.1.1 | sz | ERR4830859 | MDR-TB | lineage4.4.1.1 | sz | ERR4830868 | MDR-TB | lineage4.4.1.1 | sz | ERR4830872 | MDR-TB | lineage4.4.1.1 | sz | ERR4830870 | MDR-TB | lineage4.4.1.1 | sz | ERR4830874 | MDR-TB | lineage4.4.1.1 | sz | SRR6856071 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR9588022 | MDR-TB | lineage4.4.1.1 | None | SRR28646058 | MDR-TB | lineage4.8 | None | ERR2510692 | MDR-TB | lineage4 | it | SRR9588017 | MDR-TB | lineage4.4.1.1 | None | SRR9588028 | MDR-TB | lineage4.4.1.1 | None | SRR1710071 | RR-TB | lineage2.1 | cn | ERR552491 | MDR-TB | lineage4.4.1.1 | sz | ERR551969 | MDR-TB | lineage4.4.1.1 | sz | ERR552754 | MDR-TB | lineage4.4.1.1 | sz | ERR552765 | MDR-TB | lineage4.4.1.1 | sz | ERR552612 | MDR-TB | lineage4.4.1.1 | sz | ERR552822 | MDR-TB | lineage4.4.1.1 | sz | ERR552405 | MDR-TB | lineage4.4.1.1 | sz | ERR550861 | MDR-TB | lineage4.4.1.1 | sz | ERR551536 | MDR-TB | lineage4.4.1.1 | sz | ERR551692 | Pre-XDR-TB | lineage4.1.1.3 | sz | ERR551280 | MDR-TB | lineage4.4.1.1 | sz | ERR552124 | MDR-TB | lineage4.4.1.1 | sz | ERR552870 | MDR-TB | lineage4.4.1.1 | sz | ERR552193 | MDR-TB | lineage4.4.1.1 | sz | ERR553221 | MDR-TB | lineage4.4.1.1 | sz | ERR553230 | MDR-TB | lineage4.4.1.1 | sz | ERR550741 | MDR-TB | lineage4.4.1.1 | sz | ERR552150 | MDR-TB | lineage4.4.1.1 | sz | ERR553242 | MDR-TB | lineage4.4.1.1 | sz | ERR551014 | MDR-TB | lineage4.4.1.1 | sz | ERR552745 | MDR-TB | lineage4.4.1.1 | sz | ERR552540 | MDR-TB | lineage4.4.1.1 | sz | ERR550619 | Pre-XDR-TB | lineage4.1.1.3 | sz | ERR11488455 | MDR-TB | lineage4.1.1.3 | None | ERR1034711 | MDR-TB | lineage4.1.2.1 | pe | ERR11488401 | MDR-TB | lineage4.4.1.1 | None | ERR9907733 | MDR-TB | lineage4.1.1.3 | None | ERR4553849 | MDR-TB | None | ERR11082700 | RR-TB | lineage4.8 | None | ERR4020185 | MDR-TB | lineage4.4.1.1 | None | ERR551128 | MDR-TB | lineage4.8 | None | DRR184884 | MDR-TB | lineage2.2.1 | vn | SRR9588010 | MDR-TB | lineage4.4.1.1 | None | ERR10762267 | MDR-TB | lineage2.2.1 | None | SRR6896156 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2200094 | MDR-TB | lineage4.4.1.1 | None | ERR11488670 | MDR-TB | lineage4.4.1.1 | None | ERR9992968 | XDR-TB | lineage4.4.1.1 | None | ERR9992909 | XDR-TB | lineage4.4.1.1 | None | ERR11488353 | XDR-TB | lineage4.4.1.1 | None |
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