lineage | Count |
---|---|
lineage2.2.1 | 26 |
lineage2.2.1.1 | 107 |
lineage4.1.2.1;lineage3;lineage2.2.1.1 | 1 |
lineage4.2.1 | 22 |
lineage4.1.2.1 | 1 |
lineage2.2 | 1 |
lineage4.3.3 | 8 |
lineage3.1.1 | 2 |
lineage4.8 | 1 |
lineage3 | 2 |
lineage4.3.4.2 | 1 |
lineage2.2.1.2 | 2 |
lineage4.6.1.2 | 5 |
lineage4.1.1;lineage2.2.1.1 | 1 |
lineage4.5 | 1 |
lineage4.4.2 | 1 |
lineage4.1.1 | 1 |
lineage4.1.1.3 | 1 |
lineage4 | 2 |
lineage1.2.1.2.1 | 2 |
lineage4.4 | 1 |
spoligotype | Count |
---|---|
None | 189 |
ID | Drug resistance | Lineage | Country iso2 | ERR4830900 | Pre-XDR-TB | lineage2.2.1 | np | ERR4797378 | XDR-TB | lineage2.2.1.1 | in | ERR4798955 | Pre-XDR-TB | lineage4.1.2.1;lineage3;lineage2.2.1.1 | in | SRR23340034 | MDR-TB | lineage4.2.1 | None | SRR22528581 | MDR-TB | lineage4.1.2.1 | None | SRR23339985 | MDR-TB | lineage4.2.1 | None | SRR23340019 | MDR-TB | lineage4.2.1 | None | SRR6824500 | MDR-TB | lineage2.2.1 | cn | ERR4830659 | Pre-XDR-TB | lineage2.2.1 | np | SRR16087914 | MDR-TB | lineage2.2 | None | SRR23340007 | MDR-TB | lineage4.2.1 | None | SRR23340041 | MDR-TB | lineage4.2.1 | None | SRR23340143 | Pre-XDR-TB | lineage4.2.1 | None | SRR23340058 | MDR-TB | lineage4.2.1 | None | SRR23340137 | MDR-TB | lineage4.2.1 | None | SRR23340094 | MDR-TB | lineage4.2.1 | None | SRR23340139 | MDR-TB | lineage4.2.1 | None | SRR23340155 | MDR-TB | lineage4.2.1 | None | SRR23340141 | MDR-TB | lineage4.2.1 | None | SRR23340150 | MDR-TB | lineage4.2.1 | None | SRR23340158 | MDR-TB | lineage4.2.1 | None | SRR23340142 | MDR-TB | lineage4.2.1 | None | SRR23340165 | MDR-TB | lineage4.2.1 | None | SRR23340157 | MDR-TB | lineage4.2.1 | None | ERR4797927 | MDR-TB | lineage2.2.1.1 | in | ERR4800577 | Pre-XDR-TB | lineage2.2.1 | in | ERR4797953 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796629 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797451 | MDR-TB | lineage4.3.3 | in | ERR4798481 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800532 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797928 | MDR-TB | lineage2.2.1.1 | in | ERR4797511 | MDR-TB | lineage2.2.1.1 | in | ERR4797934 | Pre-XDR-TB | lineage2.2.1 | in | ERR4796478 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2512440 | MDR-TB | lineage4.2.1 | gb | ERR4796989 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2517122 | Pre-XDR-TB | lineage2.2.1.1 | gb | SAMN02403531 | MDR-TB | lineage3.1.1 | za | ERR2516777 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR4799267 | XDR-TB | lineage2.2.1.1 | in | ERR4828998 | MDR-TB | lineage4.8 | it | SRR5341421 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4797083 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798969 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799907 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4830908 | Pre-XDR-TB | lineage2.2.1 | np | ERR4796469 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2513608 | MDR-TB | lineage4.2.1 | gb | ERR4830993 | Pre-XDR-TB | lineage2.2.1 | np | ERR4796573 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4813866 | MDR-TB | lineage4.3.3 | br | SAMN03246269 | MDR-TB | lineage2.2.1 | cn | SRR6257027 | MDR-TB | lineage2.2.1 | ru | SRR671726 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2510639 | Pre-XDR-TB | lineage3 | pk | ERR4799709 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800004 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4821230 | MDR-TB | lineage4.2.1 | gb | ERR2516492 | Pre-XDR-TB | lineage4.3.3 | pe | ERR2510633 | Pre-XDR-TB | lineage3 | None | SRR5709938 | Pre-XDR-TB | lineage4.3.4.2 | th | ERR4800433 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799375 | MDR-TB | lineage2.2.1.1 | in | ERR4798365 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798106 | Pre-XDR-TB | lineage4.3.3 | in | ERR4796374 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800476 | XDR-TB | lineage2.2.1.1 | in | ERR4798146 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798455 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR1213840 | RR-TB | lineage2.2.1 | kr | ERR4798639 | MDR-TB | lineage2.2.1.1 | in | ERR6358877 | MDR-TB | lineage4.6.1.2 | None | ERR4799625 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797034 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798860 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800483 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4822440 | MDR-TB | lineage2.2.1 | de | ERR4798427 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4831024 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4799137 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800553 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR3148182 | MDR-TB | lineage2.2.1 | mx | ERR4799173 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796597 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797417 | Pre-XDR-TB | lineage4.1.1;lineage2.2.1.1 | in | ERR4799665 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797542 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799006 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797395 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800427 | MDR-TB | lineage2.2.1.1 | in | ERR4796521 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2512878 | MDR-TB | lineage4.2.1 | gb | ERR4798736 | Pre-XDR-TB | lineage2.2.1.1 | in | SAMN02403590 | MDR-TB | lineage3.1.1 | za | ERR4796949 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800455 | MDR-TB | lineage2.2.1.1 | in | ERR4814335 | MDR-TB | lineage4.2.1 | gb | ERR4798968 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797387 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799196 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800232 | MDR-TB | lineage2.2.1.1 | in | ERR4800562 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798921 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799901 | MDR-TB | lineage2.2.1.1 | in | ERR4822338 | MDR-TB | lineage2.2.1 | de | ERR4831489 | Pre-XDR-TB | lineage4.5 | None | ERR6358876 | MDR-TB | lineage4.6.1.2 | None | ERR4798724 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796823 | MDR-TB | lineage2.2.1.1 | in | ERR4810464 | RR-TB | lineage4.4.2 | cn | ERR4813864 | MDR-TB | lineage4.3.3 | br | ERR4798248 | MDR-TB | lineage2.2.1.1 | in | ERR4812994 | Pre-XDR-TB | lineage4.1.1 | None | ERR4830956 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4800394 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2707104 | MDR-TB | lineage4.6.1.2 | cd | ERR4830906 | Pre-XDR-TB | lineage2.2.1 | np | ERR4798779 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798514 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798783 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799008 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR5341218 | MDR-TB | lineage4.3.3 | None | ERR4797695 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798301 | Pre-XDR-TB | lineage2.2.1 | in | ERR4799465 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796502 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR8975430 | MDR-TB | lineage4.1.1.3 | None | ERR4830902 | Pre-XDR-TB | lineage2.2.1 | np | ERR4796326 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4830907 | Pre-XDR-TB | lineage2.2.1 | np | ERR4798063 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4798745 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4830899 | Pre-XDR-TB | lineage2.2.1 | np | ERR3287696 | MDR-TB | lineage4 | pe | ERR4797715 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4816879 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR4796586 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798890 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798440 | MDR-TB | lineage2.2.1.1 | in | ERR4798441 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2516892 | HR-TB | lineage1.2.1.2.1 | gb | ERR4796816 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4822391 | Pre-XDR-TB | lineage2.2.1 | kg | ERR4800514 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800440 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799571 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798107 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2514443 | Sensitive | lineage4.4 | None | ERR4798574 | MDR-TB | lineage2.2.1.1 | in | ERR4798508 | Pre-XDR-TB | lineage2.2.1.1 | in | SAMN02586040 | Pre-XDR-TB | lineage4.3.3 | za | ERR4799145 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796903 | MDR-TB | lineage2.2.1.1 | in | ERR4799829 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR6358888 | MDR-TB | lineage4.6.1.2 | None | ERR4798046 | Pre-XDR-TB | lineage2.2.1.1 | in | SAMN02403538 | MDR-TB | lineage2.2.1 | za | ERR4821532 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR4796566 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4830130 | MDR-TB | lineage2.2.1 | None | SRR5341286 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR228039 | MDR-TB | lineage2.2.1 | ru | SRR5341471 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799698 | MDR-TB | lineage2.2.1.1 | in | ERR4797105 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR2516789 | HR-TB | lineage1.2.1.2.1 | gb | ERR4797478 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798250 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798326 | MDR-TB | lineage2.2.1.1 | in | ERR4800515 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799447 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800380 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799950 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798610 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797657 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4830996 | Pre-XDR-TB | lineage2.2.1 | np | ERR2516591 | Pre-XDR-TB | lineage4 | pe | ERR4798593 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798682 | Pre-XDR-TB | lineage2.2.1.1 | in | SAMN02585957 | Pre-XDR-TB | lineage4.3.3 | za | ERR4800395 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800569 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR6358889 | MDR-TB | lineage4.6.1.2 | None | ERR4800246 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799127 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798251 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799810 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR502930 | MDR-TB | lineage2.2.1 | None |
---|