Rv0668 - p.Pro1040Leu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
2 RR-TB
2 HR-TB
133 MDR-TB
63 Pre-XDR-TB
11 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 197 |
| lineage2.2.1;lineage2.2.2 | 2 |
| lineage4.1.2.1.1 | 1 |
| lineage4.8 | 3 |
| lineage2.2.1.1 | 2 |
| lineage3 | 2 |
| lineage1.1.2 | 1 |
| lineage4.3.2 | 1 |
| lineage2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 211 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29055517 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093526 | MDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR5987355 | MDR-TB | lineage2.2.1 | None | SRR29055587 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056042 | Pre-XDR-TB | lineage2.2.1 | None | SRR29056075 | MDR-TB | lineage2.2.1 | None | ERR4831576 | Pre-XDR-TB | lineage2.2.1 | None | ERR845305 | MDR-TB | lineage4.1.2.1.1 | None | ERR9992713 | XDR-TB | lineage2.2.1 | None | SRR29093295 | MDR-TB | lineage2.2.1 | None | SRR6797812 | MDR-TB | lineage4.8 | None | ERR9993007 | XDR-TB | lineage2.2.1 | None | ERR11044145 | MDR-TB | lineage2.2.1 | None | SRR29093835 | MDR-TB | lineage2.2.1 | None | SRR29093490 | MDR-TB | lineage2.2.1 | None | SRR16156849 | MDR-TB | lineage2.2.1 | None | SRR29093497 | MDR-TB | lineage2.2.1 | None | SRR29055527 | MDR-TB | lineage2.2.1 | None | SRR10869216 | HR-TB | lineage2.2.1.1 | None | ERR4011078 | MDR-TB | lineage2.2.1 | None | ERR9120169 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096534 | MDR-TB | lineage2.2.1 | None | SRR29093494 | MDR-TB | lineage2.2.1 | None | ERR10748541 | Pre-XDR-TB | lineage2.2.1 | None | SRR29055549 | MDR-TB | lineage2.2.1 | None | SRR16156841 | MDR-TB | lineage2.2.1 | None | ERR6362185 | MDR-TB | lineage2.2.1 | None | SRR16156850 | MDR-TB | lineage2.2.1 | None | ERR5979442 | MDR-TB | lineage3 | None | SRR16157105 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093516 | MDR-TB | lineage2.2.1 | None | ERR1035023 | MDR-TB | lineage2.2.1 | za | ERR1035015 | MDR-TB | lineage2.2.1 | za | SRR29093347 | MDR-TB | lineage2.2.1 | None | SRR29093145 | MDR-TB | lineage2.2.1 | None | ERR10748118 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120127 | MDR-TB | lineage2.2.1 | None | ERR9806986 | MDR-TB | lineage2.2.1 | None | ERR10112851 | XDR-TB | lineage2.2.1 | None | SRR29055870 | Pre-XDR-TB | lineage2.2.1 | None | SRR29772619 | MDR-TB | lineage1.1.2 | None | SRR29093695 | MDR-TB | lineage2.2.1 | None | ERR7911534 | Pre-XDR-TB | lineage2.2.1 | za | ERR8975697 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975804 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806977 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987265 | MDR-TB | lineage2.2.1 | None | SRR16156827 | Pre-XDR-TB | lineage2.2.1 | None | ERR5987286 | MDR-TB | lineage2.2.1 | None | ERR10748402 | MDR-TB | lineage2.2.1 | None | ERR9806961 | Pre-XDR-TB | lineage2.2.1 | None | ERR9806995 | MDR-TB | lineage2.2.1 | None | SRR10869170 | MDR-TB | lineage2.2.1 | None | ERR9120125 | MDR-TB | lineage2.2.1 | None | ERR10112906 | MDR-TB | lineage2.2.1 | None | SRR29056309 | MDR-TB | lineage2.2.1 | None | ERR13289292 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288810 | MDR-TB | lineage2.2.1 | None | ERR13289318 | MDR-TB | lineage2.2.1 | None | ERR9120170 | Pre-XDR-TB | lineage2.2.1 | None | ERR9992796 | XDR-TB | lineage2.2.1 | None | SRR16156848 | MDR-TB | lineage2.2.1 | None | ERR6362197 | MDR-TB | lineage2.2.1 | None | ERR6362831 | MDR-TB | lineage2.2.1 | None | ERR5987327 | MDR-TB | lineage2.2.1 | None | ERR8025684 | Pre-XDR-TB | lineage2.2.1 | None | ERR776663 | MDR-TB | lineage4.3.2 | None | ERR10748107 | Pre-XDR-TB | lineage2.2.1 | None | ERR1035007 | MDR-TB | lineage2.2.1 | za | SRR29055878 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156857 | MDR-TB | lineage2.2.1 | None | ERR9119770 | MDR-TB | lineage2.2.1 | None | ERR10748151 | MDR-TB | lineage2.2.1 | None | ERR10748396 | MDR-TB | lineage2.2.1 | None | SRR10869119 | MDR-TB | lineage2.2.1 | None | ERR9119831 | MDR-TB | lineage2.2.1 | None | SRR29056263 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681389 | MDR-TB | lineage4.8 | None | SRR16156787 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748377 | MDR-TB | lineage2.2.1 | None | SRR29055851 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093646 | MDR-TB | lineage2.2.1 | None | ERR10112897 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096545 | MDR-TB | lineage2.2.1 | None | ERR6362271 | MDR-TB | lineage2.2.1 | None | SRR29093184 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156694 | MDR-TB | lineage2.2.1 | None | ERR5979454 | Pre-XDR-TB | lineage3 | None | ERR4831589 | MDR-TB | lineage2.2.1 | None | SRR10869251 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156677 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093169 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156831 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748439 | MDR-TB | lineage2.2.1 | None | SRR10869071 | MDR-TB | lineage2.2.1 | None | SRR29681477 | HR-TB | lineage4.8 | None | ERR9120072 | MDR-TB | lineage2.2.1 | None | ERR9992980 | XDR-TB | lineage2.2.1 | None | SRR29055837 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119853 | MDR-TB | lineage2.2.1 | None | ERR10748393 | MDR-TB | lineage2.2.1 | None | ERR10748348 | MDR-TB | lineage2.2.1 | None | ERR10748135 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156842 | MDR-TB | lineage2.2.1 | None | SRR29093865 | MDR-TB | lineage2.2.1 | None | ERR10112892 | MDR-TB | lineage2.2.1 | None | ERR10112869 | Pre-XDR-TB | lineage2.2.1 | None | ERR9119870 | MDR-TB | lineage2.2.1 | None | SRR29094085 | MDR-TB | lineage2.2.1 | None | ERR9806951 | MDR-TB | lineage2.2.1 | None | ERR9120173 | MDR-TB | lineage2.2.1 | None | SRR10869172 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775005 | MDR-TB | lineage2.2.1 | None | ERR10748466 | XDR-TB | lineage2.2.1 | None | ERR6362476 | MDR-TB | lineage2.2.1 | None | ERR10748200 | Pre-XDR-TB | lineage2.2.1 | None | ERR13195604 | MDR-TB | lineage2.2.2 | None | ERR6362186 | MDR-TB | lineage2.2.1 | None | ERR8025645 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None | ERR5987440 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975786 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120015 | MDR-TB | lineage2.2.1 | None | ERR1873487 | Pre-XDR-TB | lineage2.2.1 | za | ERR2516817 | MDR-TB | lineage2.2.1 | gb | ERR2515708 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515513 | Pre-XDR-TB | lineage2.2.1 | za | ERR2515920 | Pre-XDR-TB | lineage2.2.1 | za | SRR16156829 | MDR-TB | lineage2.2.1 | None | ERR10748539 | MDR-TB | lineage2.2.1 | None | ERR10112862 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096376 | MDR-TB | lineage2.2.1 | None | ERR10748156 | Pre-XDR-TB | lineage2.2.1 | None | ERR11775007 | MDR-TB | lineage2.2.1 | None | ERR10748526 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156795 | MDR-TB | lineage2.2.1 | None | SRR16156834 | MDR-TB | lineage2.2.1 | None | ERR4896324 | MDR-TB | lineage2.2.1 | None | SRR10869141 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093228 | MDR-TB | lineage2.2.1 | None | ERR4423575 | RR-TB | lineage2.2.1 | None | SRR10869224 | MDR-TB | lineage2.2.1 | None | ERR6362820 | MDR-TB | lineage2.2.1 | None | ERR9993211 | XDR-TB | lineage2.2.1 | None | ERR2515112 | MDR-TB | lineage2.2.1 | za | ERR10748483 | MDR-TB | lineage2.2.1 | None | ERR10748153 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10748465 | MDR-TB | lineage2.2.1 | None | SRR10869287 | MDR-TB | lineage2.2.1 | None | SRR29096332 | MDR-TB | lineage2.2.1 | None | ERR9120014 | MDR-TB | lineage2.2.1 | None | SRR10869130 | MDR-TB | lineage2.2.1 | None | SRR10869131 | MDR-TB | lineage2.2.1 | None | ERR4423576 | RR-TB | lineage2.2.1 | None | ERR10748356 | MDR-TB | lineage2.2.1 | None | SRR16156752 | MDR-TB | lineage2.2.1 | None | SRR29096623 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093702 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093607 | MDR-TB | lineage2.2.1 | None | SRR16156847 | MDR-TB | lineage2.2.1 | None | SRR10869275 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093658 | MDR-TB | lineage2.2.1 | None | ERR5987272 | MDR-TB | lineage2.2.1 | None | ERR5987453 | MDR-TB | lineage2.2.1 | None | ERR9119885 | MDR-TB | lineage2.2.1 | None | SRR29093519 | MDR-TB | lineage2.2.1 | None | ERR9119854 | MDR-TB | lineage2.2.1 | None | SRR29055559 | MDR-TB | lineage2.2.1 | None | ERR10748386 | MDR-TB | lineage2.2.1 | None | ERR10748430 | MDR-TB | lineage2.2.1 | None | ERR2517054 | MDR-TB | lineage2.2.1 | gb | ERR13285194 | MDR-TB | lineage2.2.1 | None | ERR10748514 | MDR-TB | lineage2.2.1 | None | SRR29093400 | Pre-XDR-TB | lineage2.2.1 | None | SRR29094028 | MDR-TB | lineage2.2.1 | None | SRR29093394 | MDR-TB | lineage2.2.1 | None | ERR9993250 | XDR-TB | lineage2.2.1 | None | ERR10748438 | MDR-TB | lineage2.2.1 | None | ERR9806976 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748131 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096624 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156701 | MDR-TB | lineage2.2.1 | None | SRR10869278 | Pre-XDR-TB | lineage2.2.1 | None | SRR10869041 | MDR-TB | lineage2.2.1 | None | ERR751559 | MDR-TB | lineage4.3.4.2 | pe | ERR7911618 | Pre-XDR-TB | lineage2.2.1 | za | ERR10748126 | MDR-TB | lineage2.2.1 | None | ERR9806994 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120073 | MDR-TB | lineage2.2.1 | None | ERR9120174 | MDR-TB | lineage2.2.1 | None | ERR10748332 | MDR-TB | lineage2.2.1 | None | SRR29096845 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093418 | Pre-XDR-TB | lineage2.2.1 | None | SRR29096622 | MDR-TB | lineage2.2.1 | None | ERR10748106 | XDR-TB | lineage2.2.1 | None | ERR5987446 | MDR-TB | lineage2.2.1 | None | ERR6362478 | MDR-TB | lineage2.2.1 | None | ERR10748343 | MDR-TB | lineage2.2.1 | None | SRR10869194 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748313 | MDR-TB | lineage2.2.1 | None | ERR9992973 | XDR-TB | lineage2.2.1 | None | ERR8975802 | MDR-TB | lineage2.2.1 | None | ERR8975648 | XDR-TB | lineage2.2.1 | None | SRR16156801 | MDR-TB | lineage2.2.1 | None | SRR16156828 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011052 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120126 | MDR-TB | lineage2.2.1 | None | ERR8025512 | Pre-XDR-TB | lineage2.2.1 | None | ERR10748375 | MDR-TB | lineage2.2.1 | None | SRR29093155 | MDR-TB | lineage2.2.1 | None | SRR29093719 | MDR-TB | lineage2.2.1 | None | ERR4831571 | MDR-TB | lineage2.2.1 | None |
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