Rv0676c - c.2485_2487delATCinsCG
Drug resistance types
1 Sensitive
3 RR-TB
26 HR-TB
14 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2 | 1 |
| M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | 1 |
| lineage2.2.1 | 4 |
| lineage4.9 | 28 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| La1.8.1 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| lineage4 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage4.3.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | 1 |
| 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 57 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR3675558 | MDR-TB | M.canetti;lineage4.1.1.3;lineage6.3;lineage8 | None | SRR10315466 | RR-TB | lineage2.2.1 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR3675486 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR5311096 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR9634265 | Sensitive | lineage4.3.4.2 | None | ERR3283017 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR137286 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | SRR6046514 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675545 | RR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR3675518 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675444 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR3675585 | HR-TB | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | SRR6045948 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | SRR3675320 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9 | None | SRR3675568 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR1063896 | HR-TB | None |
|---|
