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SRA data
Rv0682
- c.-354C>T
Drug resistance types
0 Sensitive
0 RR-TB
5 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
2 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
2
1
lineage3.1.2.1;lineage3.1.2.2
1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
1
M.canetti;lineage4.9;lineage9
1
M.canetti;lineage2.1;lineage4.9
1
lineage3.1.2.2
1
lineage2.1;lineage4.9
1
lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
11
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035138
MDR-TB
lineage2.1;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR161033
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR176751
Other
lineage4.9
None
ERR212121
HR-TB
lineage4.9;lineage6.3
None
ERR4798648
MDR-TB
lineage3.1.2.2
None
ERR6358991
HR-TB
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3
None
ERR6359045
Other
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3
None
ERR987722
MDR-TB
None
ERR987729
HR-TB
lineage3.1.2.1;lineage3.1.2.2
None
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