Rv0701 - c.196_198delCTGinsGC
Drug resistance types
1 Sensitive
2 RR-TB
16 HR-TB
7 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
6 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.9 | 15 |
| La1.7;lineage4.9 | 2 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage4.1.2 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| 2 | |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 32 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR736872 | HR-TB | lineage4.9 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323062 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR294266 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR1063896 | HR-TB | None | ERR9786843 | Other | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR124636 | HR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None |
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