Rv0701 - c.546G>A
Drug resistance types
18 Sensitive
4 RR-TB
8 HR-TB
71 MDR-TB
178 Pre-XDR-TB
32 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.3 | 301 |
| lineage4.9 | 2 |
| lineage2.2.1 | 2 |
| lineage2.2.1.1;lineage4.1.1.3 | 1 |
| lineage2.2.2;lineage4.1.1.3 | 3 |
| lineage4.1.1.3;lineage4.1.2 | 1 |
| lineage3;lineage4.1.1.3 | 1 |
| lineage4.1.1.3;lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 312 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13288968 | MDR-TB | lineage4.1.1.3 | None | ERR8025541 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3340722 | Sensitive | lineage4.1.1.3 | za | SRR29093572 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093512 | MDR-TB | lineage4.1.1.3 | None | ERR10748491 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR28868811 | Sensitive | lineage4.1.1.3 | None | ERR9119696 | MDR-TB | lineage4.1.1.3 | None | ERR9120056 | MDR-TB | lineage4.1.1.3 | None | SRR29093720 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13289331 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9119744 | MDR-TB | lineage4.1.1.3 | None | ERR2512844 | Sensitive | lineage4.1.1.3 | gb | SRR29056326 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9120109 | MDR-TB | lineage4.1.1.3 | None | ERR9807002 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748321 | MDR-TB | lineage4.1.1.3 | None | ERR9029385 | HR-TB | lineage4.1.1.3 | None | ERR1023463 | MDR-TB | lineage4.1.1.3 | None | ERR1873550 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4831561 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR6362565 | MDR-TB | lineage4.1.1.3 | None | ERR9806899 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806888 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748527 | MDR-TB | lineage4.1.1.3 | None | SRR29096577 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10112837 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911610 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9806985 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093749 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093310 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5987338 | MDR-TB | lineage4.1.1.3 | None | ERR8975781 | XDR-TB | lineage4.1.1.3 | None | ERR10112889 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9119825 | MDR-TB | lineage4.1.1.3 | None | ERR4011943 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096872 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5987235 | MDR-TB | lineage4.1.1.3 | None | ERR10610278 | MDR-TB | lineage4.1.1.3 | None | ERR13286099 | MDR-TB | lineage4.1.1.3 | None | ERR9807036 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR6362551 | MDR-TB | lineage4.1.1.3 | None | ERR1633883 | Sensitive | lineage4.1.1.3 | za | SRR29093629 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2515475 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR13289296 | MDR-TB | lineage4.1.1.3 | None | SRR8758896 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4831528 | MDR-TB | lineage4.1.1.3 | None | ERR4831558 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869227 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5987294 | MDR-TB | lineage4.1.1.3 | None | ERR9806869 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29056327 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR495114 | Sensitive | lineage4.1.1.3 | None | SRR29056301 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4011940 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR279583 | Sensitive | lineage4.1.1.3 | None | ERR9119916 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869203 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911628 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR16156240 | MDR-TB | lineage4.1.1.3 | None | ERR9993083 | XDR-TB | lineage4.1.1.3 | None | SRR16156859 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156716 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869213 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055939 | MDR-TB | lineage4.1.1.3 | None | SRR29056305 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8975777 | MDR-TB | lineage4.1.1.3 | None | SRR29093458 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR6832561 | MDR-TB | lineage2.2.1 | None | ERR4011939 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806866 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806954 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156243 | MDR-TB | lineage4.1.1.3 | None | ERR2515640 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911536 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9806876 | MDR-TB | lineage4.1.1.3 | None | ERR13288959 | MDR-TB | lineage4.1.1.3 | None | ERR10748318 | MDR-TB | lineage4.1.1.3 | None | ERR10748320 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1873462 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9993088 | MDR-TB | lineage4.1.1.3 | None | ERR9993009 | XDR-TB | lineage4.1.1.3 | None | ERR8699817 | Sensitive | lineage4.1.1.3 | None | ERR6362206 | MDR-TB | lineage4.1.1.3 | None | ERR1034990 | MDR-TB | lineage4.1.1.3 | za | SRR10869158 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156738 | MDR-TB | lineage2.2.1.1;lineage4.1.1.3 | None | ERR9119693 | MDR-TB | lineage4.1.1.3 | None | ERR10969105 | Sensitive | lineage4.1.1.3 | None | SRR10869284 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911675 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1035037 | MDR-TB | lineage4.1.1.3 | za | ERR9806925 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806931 | MDR-TB | lineage4.1.1.3 | None | SRR16156846 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR2515337 | XDR-TB | lineage4.1.1.3 | za | ERR1034639 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993209 | XDR-TB | lineage4.1.1.3 | None | ERR10969222 | Sensitive | lineage4.1.1.3 | None | ERR7911597 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR13288729 | Sensitive | lineage4.1.1.3 | None | ERR9807014 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806910 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR970448 | RR-TB | lineage4.1.1.3 | None | SRR16156199 | MDR-TB | lineage4.1.1.3 | None | ERR3340719 | Sensitive | lineage4.1.1.3 | za | ERR10112843 | XDR-TB | lineage4.1.1.3 | None | ERR9806696 | MDR-TB | lineage4.1.1.3 | None | ERR9992974 | XDR-TB | lineage4.1.1.3 | None | SRR16157097 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4808876 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911684 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1034641 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR3340696 | Sensitive | lineage4.1.1.3 | za | ERR1873418 | HR-TB | lineage4.1.1.3 | None | SRR6832250 | MDR-TB | lineage2.2.1 | None | SRR10869134 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096852 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR6362771 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4011942 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869252 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156687 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869214 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093339 | MDR-TB | lineage4.1.1.3 | None | ERR970450 | RR-TB | lineage4.1.1.3 | None | SRR16156756 | MDR-TB | lineage4.1.1.3 | None | ERR8975629 | HR-TB | lineage4.1.1.3 | None | ERR10748150 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748485 | XDR-TB | lineage4.1.1.3 | None | ERR8975014 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911636 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | za | SRR29096311 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29231338 | Pre-XDR-TB | lineage4.1.1.3;lineage4.1.2 | None | ERR9120110 | MDR-TB | lineage4.1.1.3 | None | ERR9993229 | XDR-TB | lineage4.1.1.3 | None | ERR8025595 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806966 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993216 | MDR-TB | lineage4.1.1.3 | None | SRR29055594 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911637 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873441 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873448 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR1873391 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR970449 | RR-TB | lineage4.1.1.3 | None | ERR8975742 | XDR-TB | lineage4.1.1.3 | None | ERR10748353 | XDR-TB | lineage4.1.1.3 | None | ERR9992839 | XDR-TB | lineage4.1.1.3 | None | SRR16156239 | MDR-TB | lineage4.1.1.3 | None | ERR1873446 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2515133 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR8025664 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4809060 | Sensitive | lineage4.1.1.3 | za | ERR9807012 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993219 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156811 | MDR-TB | lineage4.1.1.3 | None | ERR7362011 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9807004 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10112876 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR16156241 | MDR-TB | lineage4.1.1.3 | None | ERR10112853 | XDR-TB | lineage4.1.1.3 | None | ERR3340730 | Sensitive | lineage4.1.1.3 | za | ERR9806944 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29056112 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8975785 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1034921 | RR-TB | lineage4.1.1.3 | za | ERR3797047 | MDR-TB | lineage4.9 | None | ERR2515546 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4011941 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869234 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806952 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4011938 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1873554 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9119915 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1035061 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9993031 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1873540 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR10748448 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025490 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025508 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993114 | XDR-TB | lineage4.1.1.3 | None | ERR9119818 | MDR-TB | lineage4.1.1.3 | None | SRR21732959 | Sensitive | lineage4.1.1.3 | None | ERR7911468 | Sensitive | lineage4.1.1.3 | za | ERR6052107 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9992753 | XDR-TB | lineage4.1.1.3 | None | SRR29093191 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13288935 | XDR-TB | lineage4.1.1.3 | None | SRR28351179 | MDR-TB | lineage4.1.1.3 | None | ERR9993208 | XDR-TB | lineage4.1.1.3 | None | ERR13289008 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | None | SRR29093183 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9029384 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1034971 | HR-TB | lineage4.1.1.3 | za | ERR6362894 | MDR-TB | lineage4.1.1.3 | None | ERR9807010 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10112861 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025628 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093268 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4808942 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR8699152 | Sensitive | lineage4.1.1.3 | None | ERR1873400 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096406 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29096562 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13289406 | XDR-TB | lineage4.1.1.3 | None | ERR8025744 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9807000 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911459 | Sensitive | lineage4.1.1.3 | za | SRR10869164 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10112839 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13289314 | MDR-TB | lineage4.1.1.3 | None | ERR6052103 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025443 | Pre-XDR-TB | lineage2.2.2;lineage4.1.1.3 | None | ERR8025698 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806997 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13285205 | Other | lineage4.1.1.3 | None | ERR10748381 | MDR-TB | lineage3;lineage4.1.1.3 | None | ERR9806973 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025592 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025435 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748522 | MDR-TB | lineage4.1.1.3 | None | ERR9993264 | XDR-TB | lineage4.1.1.3 | None | ERR9120057 | MDR-TB | lineage4.1.1.3 | None | ERR4831557 | Pre-XDR-TB | lineage4.1.1.3;lineage4.3.2.1 | None | SRR16156755 | MDR-TB | lineage4.1.1.3 | None | ERR8025692 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911663 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR29096475 | HR-TB | lineage4.1.1.3 | None | ERR4423565 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10610336 | MDR-TB | lineage4.1.1.3 | None | ERR10112887 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9992833 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993105 | XDR-TB | lineage4.1.1.3 | None | ERR10112840 | XDR-TB | lineage4.1.1.3 | None | ERR5918023 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR29093456 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869161 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9119861 | MDR-TB | lineage4.1.1.3 | None | SRR10869239 | MDR-TB | lineage4.1.1.3 | None | ERR7911596 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9993218 | XDR-TB | lineage4.1.1.3 | None | ERR7911585 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR7911590 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR10610176 | MDR-TB | lineage4.1.1.3 | None | ERR4011976 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR5918040 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR29093345 | MDR-TB | lineage4.1.1.3 | None | SRR29096345 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748315 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806628 | MDR-TB | lineage4.1.1.3 | None | SRR10869197 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10869151 | HR-TB | lineage4.1.1.3 | None | SRR29093352 | HR-TB | lineage4.1.1.3 | None | SRR16156719 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025711 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025573 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806880 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911704 | MDR-TB | lineage4.1.1.3 | za | ERR8025703 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR2515568 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR5987307 | MDR-TB | lineage4.1.1.3 | None | SRR16156730 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911601 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9992746 | XDR-TB | lineage4.1.1.3 | None | SRR16156282 | XDR-TB | lineage4.1.1.3 | None | SRR16156747 | MDR-TB | lineage4.1.1.3 | None | ERR1873518 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR10748158 | XDR-TB | lineage4.1.1.3 | None | ERR9993230 | XDR-TB | lineage4.1.1.3 | None | ERR1873546 | Pre-XDR-TB | lineage4.1.1.3 | za | SRR29096883 | MDR-TB | lineage4.1.1.3 | None | ERR9806953 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7361986 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093245 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29093427 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR6362393 | MDR-TB | lineage4.1.1.3 | None | ERR9992751 | XDR-TB | lineage4.1.1.3 | None | ERR10748424 | MDR-TB | lineage4.1.1.3 | None | ERR10748556 | MDR-TB | lineage4.1.1.3 | None | ERR8975740 | XDR-TB | lineage4.1.1.3 | None | ERR7911677 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR4423566 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055798 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806971 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8025662 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748165 | XDR-TB | lineage4.1.1.3 | None | ERR9992998 | XDR-TB | lineage4.1.1.3 | None | ERR10112890 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806962 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806939 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9993065 | XDR-TB | lineage4.1.1.3 | None | ERR9120165 | MDR-TB | lineage4.1.1.3 | None | SRR29093974 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR4896323 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13285251 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR1035057 | MDR-TB | lineage4.1.1.3 | za | SRR29093248 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9992989 | XDR-TB | lineage4.1.1.3 | None | ERR11774973 | MDR-TB | lineage4.1.1.3 | None | ERR5918039 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR6362259 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR13286205 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8975725 | MDR-TB | lineage4.1.1.3 | None | SRR29093214 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29056277 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR10748144 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29055524 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR9806897 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR7911593 | Pre-XDR-TB | lineage4.1.1.3 | za | ERR9806988 | Pre-XDR-TB | lineage4.1.1.3 | None |
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