lineage | Count |
---|---|
lineage6.3;lineage4.9;lineage2.1 | 1 |
59 | |
lineage2.2 | 1 |
lineage4 | 42 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage2.1 | 1 |
lineage4.9 | 1 |
lineage2.2.1 | 2 |
lineage2.2.1.1 | 1 |
lineage4.3.2.1 | 1 |
lineage4.1.2 | 1 |
lineage4.4.1.2 | 1 |
lineage3.1 | 1 |
lineage4;lineage3.1 | 1 |
lineage1.1.3.1 | 1 |
lineage2.2.1.2 | 2 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR14801749 | Sensitive | None | SRR18910194 | HR-TB | lineage2.2 | None | ERR176778 | HR-TB | None | ERR1035239 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675246 | Sensitive | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR161033 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675270 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR4818929 | HR-TB | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341469 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR6325444 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6046299 | HR-TB | None | ERR278594 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6511621 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR294248 | HR-TB | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR323038 | HR-TB | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR323055 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323063 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR067699 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3283014 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283028 | Other | None | ERR3283032 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797064 | Sensitive | None | ERR405209 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR6866022 | Other | None | ERR6866639 | Other | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR6358837 | HR-TB | None | ERR736865 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR987722 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None |
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