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SRA data
Rv1854c
- c.1209C>T
Drug resistance types
2 Sensitive
1 RR-TB
15 HR-TB
9 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
M.canetti;lineage2.1;lineage4.9
5
M.canetti;lineage2.1;lineage4.9;lineage6.3
4
lineage4.9
4
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
2
lineage4.2;lineage4.8.1;lineage4.9
2
lineage4.2;lineage4.9
2
lineage2.1;lineage4.1.1.1;lineage6.3
2
M.canetti;lineage2.2
1
La1.7.1
1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
29
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1035239
MDR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR11464996
Sensitive
lineage4.9
None
ERR11466453
Sensitive
lineage4.9
None
ERR1873396
Pre-XDR-TB
M.canetti;lineage2.2
None
ERR278594
HR-TB
lineage2.1;lineage4.9
None
ERR294266
HR-TB
lineage4.2;lineage4.8.1;lineage4.9
None
ERR323041
HR-TB
M.canetti;lineage2.1
None
ERR3797016
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR386953
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4816466
HR-TB
lineage4.9
None
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