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SRA data
Rv1854c
- c.1281C>T
Drug resistance types
0 Sensitive
1 RR-TB
6 HR-TB
1 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
1 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.2;lineage4.8.1;lineage4.9
2
lineage4.2;lineage4.9
2
La3;lineage2.1;lineage4.9
1
lineage2.1;lineage4.1.4;lineage4.9
1
1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
1
La3;lineage4.9
1
Showing 1 to 7 of 7 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
9
Showing 1 to 1 of 1 entries
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR176568
HR-TB
La3;lineage2.1;lineage4.9
None
ERR176643
Other
La3;lineage4.9
None
ERR212001
HR-TB
None
ERR294266
HR-TB
lineage4.2;lineage4.8.1;lineage4.9
None
ERR3797036
HR-TB
lineage2.1;lineage4.1.4;lineage4.9
None
ERR736863
HR-TB
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
None
SRR6045785
MDR-TB
lineage4.2;lineage4.8.1;lineage4.9
None
SRR6046026
RR-TB
lineage4.2;lineage4.9
None
SRR6046295
HR-TB
lineage4.2;lineage4.9
None
Showing 1 to 9 of 9 entries
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