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SRA data
Rv1854c
- c.684C>G
Drug resistance types
1 Sensitive
1 RR-TB
6 HR-TB
0 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
4 Other
lineage Counts
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lineage
Count
lineage
Count
La3;lineage2.1;lineage4.9;lineage6.3
2
lineage2.1;lineage4.9;lineage6.3
2
M.canetti;lineage2.2
2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
La3;lineage2.1;lineage6.3
1
M.canetti;lineage2.1;lineage4.9
1
lineage2.1;lineage4.9
1
lineage4.3.4.1
1
lineage4.9
1
lineage4.9;lineage7
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
14
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR11465352
Sensitive
lineage4.3.4.1
None
ERR4810741
HR-TB
La3;lineage2.1;lineage6.3
None
ERR4811022
HR-TB
M.canetti;lineage2.1;lineage4.9
None
ERR4811075
Other
lineage2.1;lineage4.9;lineage6.3
None
ERR4811105
HR-TB
La3;lineage2.1;lineage4.9;lineage6.3
None
ERR4811142
RR-TB
La3;lineage2.1;lineage4.9;lineage6.3
None
ERR4811311
Other
lineage2.1;lineage4.9;lineage6.3
None
ERR4811493
HR-TB
lineage4.9
None
ERR4831117
HR-TB
lineage4.9;lineage7
None
Showing 1 to 10 of 14 entries
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