lineage | Count |
---|---|
lineage4 | 9 |
lineage4.6.5 | 2 |
lineage4.9 | 20 |
12 | |
lineage2.2.2 | 3 |
lineage2.2.1 | 10 |
lineage2.2.2;lineage2.2.1 | 1 |
lineage2.2 | 1 |
lineage4.3.3 | 1 |
La1.8.1 | 5 |
La1 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 | ERR6358951 | HR-TB | lineage4 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359069 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1049026 | Pre-XDR-TB | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR3675455 | Sensitive | lineage4 | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675279 | Other | None | ERR4815471 | Other | lineage4.9 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR4819933 | Other | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR2517475 | Other | lineage4 | None | SRR6046395 | HR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR502943 | HR-TB | None | ERR5162122 | HR-TB | lineage4.9 | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3468550 | HR-TB | La1.8.1 | None | ERR3468551 | HR-TB | La1.8.1 | None | ERR1063862 | HR-TB | None | ERR1063896 | Sensitive | None | ERR3468530 | Other | La1.8.1 | None | ERR3468601 | HR-TB | La1.8.1 | None | ERR3468577 | HR-TB | La1 | None | ERR400336 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4187652 | Other | lineage4.9 | None | ERR4188247 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR4188189 | Other | La1.8.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None |
---|