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SRA data
Rv1908c
- c.421_423delTTGinsCC
Drug resistance types
0 Sensitive
0 RR-TB
31 HR-TB
4 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
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lineage
Count
lineage
Count
lineage2.2.1
9
lineage4.9
4
lineage2.2.1;lineage2.2.2
4
lineage2.2.2;lineage4
4
lineage2.2.2
4
lineage2.2.1.1
3
lineage2;lineage4.9
2
La1.7.1;La1.7.X-unk4;lineage7
1
lineage4.5
1
lineage4.4.2
1
Showing 1 to 10 of 17 entries
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
40
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023502
MDR-TB
lineage2;lineage4
None
ERR3445501
HR-TB
La1.7.1;La1.7.X-unk4;lineage7
None
ERR4814639
HR-TB
lineage4.9
None
ERR4816470
HR-TB
lineage3
None
ERR4817667
HR-TB
lineage4.8
None
ERR4821655
HR-TB
lineage4.9
None
SAMN02360556
Pre-XDR-TB
lineage2.2.2
None
SAMN02360564
Pre-XDR-TB
lineage2.2.1
None
SAMN02360571
HR-TB
lineage2.2.1;lineage2.2.2
None
SAMN02360574
HR-TB
lineage2.2.1
None
Showing 1 to 10 of 40 entries
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