Rv1908c - c.421_423delTTGinsCC
Drug resistance types
0 Sensitive
0 RR-TB
31 HR-TB
4 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 9 |
| lineage2;lineage4.9 | 2 |
| lineage4.9 | 4 |
| lineage4.8 | 1 |
| lineage4.5 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 4 |
| lineage2 | 1 |
| lineage2.2.1.1 | 3 |
| lineage2.2.2 | 4 |
| lineage2.2.2;lineage4 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage2;lineage4 | 1 |
| lineage3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2;lineage4.9 | None | SRR1048994 | HR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | ERR4821655 | HR-TB | lineage4.9 | None | SRR1048869 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1049040 | HR-TB | lineage2 | None | SRR1048982 | HR-TB | lineage2.2.1.1 | None | SRR1013584 | HR-TB | lineage2.2.2 | None | SRR1013554 | MDR-TB | lineage2.2.2;lineage4 | None | SRR1049041 | HR-TB | lineage2.2.1;lineage4 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1049023 | HR-TB | lineage4.9 | None | SRR1013577 | HR-TB | lineage2.2.2 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360571 | HR-TB | lineage2.2.1;lineage2.2.2 | None | ERR4816470 | HR-TB | lineage3 | None | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1048870 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048975 | HR-TB | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1048853 | HR-TB | lineage2;lineage4.9 | None | SRR1048968 | HR-TB | lineage2.2.1;lineage2.2.2 | None | SRR1048966 | MDR-TB | lineage2.2.1 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048983 | HR-TB | lineage2.2.1.1 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1013578 | HR-TB | lineage2.2.2;lineage4 | None | SRR1013599 | HR-TB | lineage2.2.1.1;lineage4 | None | SRR1049006 | HR-TB | lineage2.2.2;lineage4 | None | SRR1013630 | Pre-XDR-TB | lineage2.2.2;lineage4 | None |
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