lineage | Count |
---|---|
lineage1.1.2 | 234 |
5 | |
lineage2.2.1;lineage1.1.2 | 2 |
lineage1.1 | 3 |
lineage4.9;lineage1.1 | 1 |
lineage2.2 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage4 | 1 |
lineage4.9 | 1 |
lineage2.2.1 | 1 |
spoligotype | Count |
---|---|
None | 250 |
ID | Drug resistance | Lineage | Country iso2 | ERR4796554 | Sensitive | lineage1.1.2 | in | ERR400469 | RR-TB | lineage1.1.2 | gb | ERR4050138 | Sensitive | lineage1.1.2 | None | ERR4553750 | HR-TB | None | ERR4796717 | Sensitive | lineage1.1.2 | in | ERR4797005 | Sensitive | lineage1.1.2 | in | ERR4797097 | Pre-XDR-TB | lineage2.2.1;lineage1.1.2 | in | ERR4797043 | MDR-TB | lineage1.1.2 | in | ERR4797030 | Sensitive | lineage1.1.2 | in | ERR4797087 | Sensitive | lineage1.1.2 | in | ERR4797389 | MDR-TB | lineage1.1.2 | in | ERR4797171 | Other | lineage1.1.2 | in | ERR4797212 | Sensitive | lineage1.1.2 | in | ERR4797386 | Sensitive | lineage1.1.2 | in | ERR4797718 | Sensitive | lineage1.1.2 | in | ERR4797630 | Sensitive | lineage1.1.2 | in | ERR4797964 | Sensitive | lineage1.1.2 | in | ERR4797910 | Sensitive | lineage1.1.2 | in | ERR4798030 | Pre-XDR-TB | lineage1.1.2 | in | ERR4798007 | Other | lineage1.1.2 | in | ERR4798193 | Sensitive | lineage1.1.2 | in | ERR4798123 | Sensitive | lineage1.1.2 | in | ERR5908246 | Sensitive | lineage1.1.2 | None | ERR4798444 | Other | lineage1.1.2 | in | ERR4798566 | Sensitive | lineage1.1.2 | in | ERR4798586 | Sensitive | lineage1.1.2 | in | ERR4799129 | Sensitive | lineage1.1.2 | in | ERR4799857 | Sensitive | lineage1.1.2 | in | ERR4800391 | Sensitive | lineage1.1.2 | None | ERR4800511 | Sensitive | lineage1.1.2 | in | ERR4800646 | MDR-TB | lineage1.1.2 | None | ERR4798375 | Sensitive | lineage1.1.2 | in | ERR4798907 | MDR-TB | lineage1.1.2 | in | ERR4800218 | MDR-TB | lineage1.1.2 | in | ERR4800670 | RR-TB | lineage1.1.2 | None | SRR11348213 | Sensitive | lineage1.1.2 | None | ERR7902612 | Sensitive | lineage1.1.2 | None | ERR7902694 | Sensitive | lineage1.1.2 | None | SRR10726046 | Sensitive | lineage1.1.2 | None | SRR11348137 | Sensitive | lineage1.1.2 | None | ERR9117818 | Sensitive | lineage1.1.2 | None | ERR9125420 | HR-TB | lineage1.1.2 | None | ERR9125462 | Sensitive | lineage1.1.2 | None | ERR9125645 | Sensitive | lineage1.1.2 | None | ERR9125896 | Sensitive | lineage1.1.2 | None | ERR9657189 | Sensitive | lineage1.1.2 | None | ERR11050201 | Sensitive | lineage1.1.2 | None | SRR10726047 | Sensitive | lineage1.1.2 | None | SRR11348135 | Sensitive | lineage1.1.2 | None | SRR11348138 | Sensitive | lineage1.1.2 | None | SRR11348168 | Sensitive | lineage1.1.2 | None | SRR11348210 | Sensitive | lineage1.1.2 | None | SRR11348209 | Sensitive | lineage1.1.2 | None | SRR11348214 | Sensitive | lineage1.1.2 | None | SRR1169536 | Sensitive | lineage1.1.2 | None | SRR1169463 | Sensitive | lineage1.1.2 | None | SRR1169517 | Sensitive | lineage1.1.2 | None | SRR1169512 | Sensitive | lineage1.1.2 | None | SRR1169548 | Sensitive | lineage1.1.2 | None | SRR1169557 | Sensitive | lineage1.1.2 | None | SRR1172052 | Sensitive | lineage1.1.2 | None | SRR1169569 | Sensitive | lineage1.1.2 | None | SRR1169585 | HR-TB | lineage1.1.2 | None | SRR1172054 | Sensitive | lineage1.1.2 | None | SRR1169570 | HR-TB | lineage1.1.2 | None | SRR1169573 | Sensitive | lineage1.1.2 | None | SRR1169579 | Sensitive | lineage1.1.2 | None | SRR1172087 | Sensitive | lineage1.1.2 | None | SRR1172163 | Sensitive | lineage1.1.2 | None | SRR1172139 | HR-TB | lineage1.1.2 | None | SRR1172174 | Sensitive | lineage1.1.2 | None | SRR1172232 | Sensitive | lineage1.1.2 | None | SRR1172280 | Sensitive | lineage1.1.2 | None | SRR1172274 | Sensitive | lineage1.1.2 | None | SRR1172743 | Sensitive | lineage1.1.2 | None | SRR1172281 | Sensitive | lineage1.1.2 | None | SRR1172939 | Sensitive | lineage1.1.2 | None | SRR1172849 | HR-TB | lineage1.1.2 | None | SRR1172862 | Other | lineage1.1.2 | None | SRR1172985 | MDR-TB | lineage1.1.2 | None | SRR1172971 | Other | lineage1.1.2 | None | SRR1172993 | Sensitive | lineage1.1.2 | None | SRR1173012 | MDR-TB | lineage1.1.2 | None | SRR1173721 | Sensitive | lineage1.1.2 | None | SRR1173044 | HR-TB | lineage1.1.2 | None | SRR1173046 | Sensitive | lineage1.1.2 | None | SRR1173209 | Sensitive | lineage1.1.2 | None | SRR1173068 | Sensitive | lineage1.1.2 | None | SRR1173264 | Sensitive | lineage1.1.2 | None | SRR1173599 | Sensitive | lineage1.1.2 | None | SRR1180169 | Sensitive | lineage1.1.2 | None | SRR1174822 | HR-TB | lineage1.1.2 | None | SRR1175035 | Sensitive | lineage1.1.2 | None | SRR1180165 | Sensitive | lineage1.1.2 | None | SRR1180251 | HR-TB | lineage1.1.2 | None | SRR1180242 | Sensitive | lineage1.1.2 | None | SRR1180183 | Sensitive | lineage1.1.2 | None | SRR1180207 | Sensitive | lineage1.1.2 | None | SRR1180264 | Sensitive | lineage1.1.2 | None | SRR1180246 | Sensitive | lineage1.1.2 | None | SRR1180331 | Sensitive | lineage1.1.2 | None | SRR1180323 | Sensitive | None | SRR1180274 | HR-TB | lineage1.1.2 | None | SRR1180505 | Sensitive | lineage1.1.2 | None | SRR1180457 | HR-TB | lineage1.1.2 | None | SRR1180484 | Sensitive | lineage1.1.2 | None | SRR1180490 | Other | lineage1.1.2 | None | SRR1182993 | Sensitive | lineage1.1.2 | None | SRR1183071 | Sensitive | lineage1.1.2 | None | SRR1183058 | Sensitive | lineage1.1.2 | None | SRR1183079 | Sensitive | None | SRR1183099 | HR-TB | lineage1.1.2 | None | SRR11972379 | MDR-TB | lineage1.1.2 | None | SRR1183142 | Sensitive | lineage1.1.2 | None | SRR1183165 | Sensitive | None | SRR12199397 | Sensitive | lineage1.1 | None | SRR12199400 | HR-TB | lineage4.9;lineage1.1 | None | SRR12199437 | Sensitive | lineage1.1.2 | None | SRR12199424 | Other | lineage1.1 | None | SRR12199438 | Sensitive | lineage2.2 | None | SRR12199467 | HR-TB | lineage1.1.2 | None | SRR12199487 | Sensitive | None | SRR15014616 | MDR-TB | lineage1.1.2 | None | SRR14179700 | Sensitive | lineage1.1.2 | None | SRR14519854 | Sensitive | lineage1.1.2 | None | SRR15014606 | MDR-TB | lineage1.1.2 | None | SRR15014615 | MDR-TB | lineage1.1.2 | None | SRR15014613 | MDR-TB | lineage1.1.2 | None | SRR12882029 | Sensitive | lineage1.1.2 | None | SRR12882663 | Sensitive | lineage1.1.2 | None | SRR14520040 | Sensitive | lineage1.1.2 | None | SRR15014634 | RR-TB | lineage1.1.2 | None | SRR15014633 | MDR-TB | lineage1.1.2 | None | SRR15014665 | Sensitive | lineage1.1.2 | None | SRR15014706 | MDR-TB | lineage1.1.2 | None | SRR15014737 | Pre-XDR-TB | lineage1.1.2 | None | SRR15014764 | MDR-TB | lineage1.1.2 | None | SRR15014739 | MDR-TB | lineage1.1.2 | None | SRR15014782 | MDR-TB | lineage1.1.2 | None | SRR15014765 | MDR-TB | lineage1.1.2 | None | SRR16058256 | Sensitive | lineage1.1.2 | None | SRR15014601 | MDR-TB | lineage1.1.2 | None | SRR17333989 | Sensitive | lineage1.1.2 | None | SRR16058314 | HR-TB | lineage1.1.2 | None | SRR16058425 | Sensitive | lineage1.1.2 | None | SRR16058689 | Sensitive | lineage1.1.2 | None | SRR17856669 | Sensitive | lineage1.1.2 | None | SRR17333993 | Sensitive | lineage1.1.2 | None | SRR17406755 | Sensitive | lineage1.1.2 | None | SRR17406758 | Sensitive | lineage1.1.2 | None | SRR17658569 | Sensitive | lineage1.1.2 | None | SRR17856660 | Sensitive | lineage1.1.2 | None | SRR18149466 | Sensitive | lineage1.1.2 | None | SRR18149447 | Sensitive | lineage1.1.2 | None | SRR18149482 | Sensitive | lineage1.1.2 | None | SRR19325554 | Sensitive | lineage1.1.2 | None | SRR18593230 | RR-TB | lineage1.1.2 | None | ERR11050813 | Sensitive | lineage1.1.2 | None | SRR2100441 | Sensitive | lineage1.1.2 | None | SRR2100288 | HR-TB | lineage1.1.2 | None | SRR2100415 | Sensitive | lineage1.1.2 | None | SRR2100434 | Other | lineage1.1.2 | None | SRR2101286 | Sensitive | lineage1.1.2 | None | SRR2100632 | Sensitive | lineage1.1.2 | None | SRR2101077 | HR-TB | lineage1.1.2 | None | SRR21728325 | Sensitive | lineage1.1.2 | None | SRR2101325 | Sensitive | lineage1.1.2 | None | SRR21662017 | Sensitive | lineage1.1.2 | None | SRR21677864 | Other | lineage1.1.2 | None | SRR22175237 | MDR-TB | lineage1.1.2 | None | SRR22175187 | XDR-TB | lineage2.2.1;lineage1.1.2 | None | SRR22424882 | RR-TB | lineage1.1.2 | None | SRR22424800 | HR-TB | lineage1.1.2 | None | SRR22424857 | Sensitive | lineage1.1.2 | None | SRR22424763 | MDR-TB | lineage1.1.2 | None | SRR22424809 | Sensitive | lineage1.1.2 | None | ERR550993 | Sensitive | lineage1.1.2 | cg | ERR11067985 | Sensitive | lineage1.1.2 | None | ERR11068586 | Sensitive | lineage1.1.2 | None | SAMN02599012 | Sensitive | lineage1.1.2 | in | ERR550992 | Sensitive | lineage1.1.2 | cg | ERR4815171 | HR-TB | lineage1.1.2 | None | SRR3105763 | Other | lineage1.1.2 | None | SRR3105754 | RR-TB | lineage4;lineage1.1.2 | None | SAMN02599184 | HR-TB | lineage1.1.2 | in | ERR4815362 | Sensitive | lineage1.1.2 | None | ERR4817347 | HR-TB | lineage4 | None | SRR7898214 | HR-TB | lineage1.1.2 | in | SRR8380871 | Sensitive | lineage1.1.2 | in | ERR4815000 | Other | lineage1.1.2 | gb | SRR7898218 | Other | lineage1.1.2 | in | SAMN02599173 | MDR-TB | lineage1.1.2 | in | SAMN02599118 | Sensitive | lineage1.1.2 | in | ERR4817359 | Sensitive | lineage1.1.2 | None | SAMN02599028 | Sensitive | lineage1.1.2 | in | SAMN02598967 | Sensitive | lineage1.1.2 | in | ERR4817728 | Sensitive | lineage1.1.2 | None | ERR4817769 | HR-TB | lineage1.1.2 | None | ERR11067165 | Sensitive | lineage1.1.2 | None | ERR2513379 | Other | lineage1.1.2 | gb | ERR228279 | Sensitive | lineage1.1.2 | None | ERR4817848 | HR-TB | lineage1.1.2 | None | ERR234235 | Sensitive | lineage1.1.2 | None | ERR4818817 | Other | lineage1.1.2 | None | ERR2512422 | Sensitive | lineage1.1.2 | gb | ERR11049269 | Sensitive | lineage1.1.2 | None | SRR7898217 | MDR-TB | lineage1.1.2 | None | ERR11049282 | Sensitive | lineage1.1.2 | None | ERR11067150 | HR-TB | lineage1.1.2 | None | SAMN02598971 | Sensitive | lineage1.1.2 | in | ERR4819040 | Sensitive | lineage1.1.2 | gb | ERR4818220 | Sensitive | lineage1.1.2 | gb | ERR4818357 | Sensitive | lineage1.1.2 | gb | ERR3275290 | Sensitive | lineage1.1.2 | nl | ERR2512644 | Sensitive | lineage1.1.2 | gb | ERR2513965 | Other | lineage1.1.2 | gb | ERR4818582 | Sensitive | lineage1.1.2 | None | SAMN02599182 | Other | lineage1.1.2 | in | SAMN02598975 | HR-TB | lineage1.1.2 | in | ERR2514034 | Sensitive | lineage1.1.2 | gb | ERR2514154 | Sensitive | lineage1.1.2 | gb | ERR4820740 | HR-TB | lineage1.1.2 | None | SAMN02598993 | Sensitive | lineage1.1.2 | in | ERR4819583 | Other | lineage1.1.2 | gb | ERR2514616 | Sensitive | lineage1.1.2 | gb | SAMN02599042 | Sensitive | lineage1.1.2 | in | ERR4819685 | Sensitive | lineage1.1.2 | None | ERR2514571 | Sensitive | lineage1.1.2 | gb | SAMN02599176 | Sensitive | lineage1.1.2 | in | SRR8380931 | Sensitive | lineage1.1.2 | in | ERR4821829 | Other | lineage1.1.2 | None | SAMN02599112 | Sensitive | lineage1.1.2 | in | ERR3275910 | Sensitive | lineage1.1.2 | nl | ERR2446453 | Sensitive | lineage1.1.2 | nl | ERR2517619 | Sensitive | lineage1.1.2 | nl | ERR4821943 | Sensitive | lineage4.9 | None | ERR4821454 | Sensitive | lineage1.1.2 | gb | ERR4822054 | Other | lineage1.1.2 | gb | SAMN02599020 | Sensitive | lineage1.1.2 | in | ERR4828634 | HR-TB | lineage2.2.1 | vn | SAMN02599145 | Sensitive | lineage1.1.2 | in | SRR6045261 | Other | lineage1.1.2 | gb | SRR6964664 | MDR-TB | lineage1.1.2 | None | SRR6797439 | Sensitive | lineage1.1 | None | SAMN02598964 | HR-TB | lineage1.1.2 | in | SAMN02598965 | Sensitive | lineage1.1.2 | in | ERR233374 | Sensitive | lineage1.1.2 | lk | ERR233372 | Sensitive | lineage1.1.2 | my | ERR11044318 | Sensitive | lineage1.1.2 | None | ERR114439 | HR-TB | lineage1.1.2 | None |
---|