Rv2043c - p.Asp63Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
3 RR-TB
5 HR-TB
217 MDR-TB
65 Pre-XDR-TB
15 XDR-TB
4 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 236 |
| lineage4.2.1 | 7 |
| lineage2.2.1;lineage4.3.3 | 4 |
| lineage4 | 5 |
| lineage4.8 | 5 |
| lineage4.1.1 | 1 |
| lineage4.2.2.2 | 6 |
| lineage3.1.2.1 | 1 |
| lineage4.3.3 | 12 |
| lineage1.2.2.2;lineage2.2.1 | 2 |
| lineage3 | 4 |
| lineage4.6.2.2 | 2 |
| lineage4.1.2.1 | 5 |
| lineage2.2.1.1 | 4 |
| lineage2.1 | 1 |
| lineage2.2.2 | 2 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
| lineage2.2.1;lineage4.8 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.4.2 | 1 |
| lineage2.2.1;lineage4.1.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.2.1.1 | 1 |
| lineage2.2.1.1;lineage3 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 309 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10397116 | MDR-TB | lineage2.2.1 | None | ERR1034857 | MDR-TB | lineage2.2.1 | pt | SRR12062521 | Pre-XDR-TB | lineage2.2.1 | None | SRR7755707 | Pre-XDR-TB | lineage4.2.1 | None | ERR13194032 | MDR-TB | lineage2.2.1 | None | ERR1035242 | MDR-TB | lineage2.2.1 | pt | ERR12916917 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR10762237 | Pre-XDR-TB | lineage2.2.1 | None | ERR11798536 | MDR-TB | lineage2.2.1 | None | SRR5153830 | MDR-TB | lineage2.2.1 | None | SRR29093100 | MDR-TB | lineage4 | None | ERR11798737 | Pre-XDR-TB | lineage4.2.1 | None | SRR28394276 | MDR-TB | lineage4.8 | None | SRR28393618 | MDR-TB | lineage4 | None | SRR18714844 | MDR-TB | lineage2.2.1 | None | ERR5864265 | MDR-TB | lineage2.2.1 | None | SRR7516428 | MDR-TB | lineage2.2.1 | None | ERR12350671 | MDR-TB | lineage2.2.1 | None | SRR6511596 | MDR-TB | lineage2.2.1 | None | ERR10395964 | MDR-TB | lineage2.2.1 | None | ERR12307399 | MDR-TB | lineage2.2.1 | None | ERR5864091 | MDR-TB | lineage2.2.1 | None | ERR5864266 | MDR-TB | lineage2.2.1 | None | ERR5865088 | MDR-TB | lineage2.2.1 | None | SRR3085289 | MDR-TB | lineage2.2.1 | None | SRR8662668 | HR-TB | lineage2.2.1 | None | ERR5864090 | MDR-TB | lineage2.2.1 | None | ERR5864092 | MDR-TB | lineage2.2.1 | None | ERR5864095 | MDR-TB | lineage2.2.1 | None | ERR5864255 | MDR-TB | lineage2.2.1 | None | ERR5865592 | MDR-TB | lineage2.2.1 | None | ERR5864252 | MDR-TB | lineage2.2.1 | None | ERR11043520 | MDR-TB | lineage2.2.1 | None | ERR5866571 | MDR-TB | lineage2.2.1 | None | SRR11871434 | XDR-TB | lineage2.2.1 | None | SRR28394248 | MDR-TB | lineage4.1.1 | None | ERR5865329 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276188 | MDR-TB | lineage4.2.2.2 | None | SRR27450066 | Other | lineage3.1.2.1 | None | ERR4827909 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516307 | MDR-TB | lineage2.2.1 | None | ERR5864100 | MDR-TB | lineage2.2.1 | None | ERR5865330 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866244 | MDR-TB | lineage2.2.1 | None | ERR12118008 | MDR-TB | lineage4.8 | None | SRR24256220 | MDR-TB | lineage2.2.1 | None | SRR28239780 | MDR-TB | lineage2.2.1 | None | SRR23311063 | MDR-TB | lineage4.3.3 | None | SRR10380150 | MDR-TB | lineage2.2.1 | None | SRR7517694 | MDR-TB | lineage2.2.1 | None | ERR4872103 | Pre-XDR-TB | lineage4.3.3 | None | ERR4828140 | MDR-TB | lineage2.2.1 | None | ERR5864098 | MDR-TB | lineage2.2.1 | None | SRR25827375 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR10380089 | Pre-XDR-TB | lineage2.2.1 | None | SRR3085262 | MDR-TB | lineage4.2.1 | None | SRR8369894 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864102 | Pre-XDR-TB | lineage2.2.1 | None | SRR29341501 | MDR-TB | lineage2.2.1 | None | SRR23861824 | MDR-TB | lineage2.2.1 | None | ERR11043233 | Pre-XDR-TB | lineage2.2.1 | None | ERR5864253 | MDR-TB | lineage2.2.1 | None | ERR5866212 | MDR-TB | lineage2.2.1 | None | ERR11043295 | MDR-TB | lineage3 | None | ERR5865426 | MDR-TB | lineage2.2.1 | None | ERR5864250 | Pre-XDR-TB | lineage2.2.1 | None | ERR12057433 | MDR-TB | lineage2.2.1 | None | ERR4828139 | MDR-TB | lineage2.2.1 | None | SRR14802156 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261260 | Pre-XDR-TB | lineage3 | None | ERR12307395 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR7755733 | MDR-TB | lineage4.3.3 | None | ERR5865091 | MDR-TB | lineage2.2.1 | None | SRR7646069 | Pre-XDR-TB | lineage4.2.1 | None | ERR5865425 | MDR-TB | lineage2.2.1 | None | SRR23861887 | MDR-TB | lineage2.2.1 | None | SRR13232676 | Pre-XDR-TB | lineage2.2.1 | None | SRR24828613 | XDR-TB | lineage2.2.1 | None | ERR12307390 | MDR-TB | lineage2.2.1 | None | ERR12307391 | MDR-TB | lineage2.2.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR7517817 | Other | lineage2.2.1 | None | ERR12916926 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865121 | MDR-TB | lineage2.2.1 | None | SRR23938698 | MDR-TB | lineage2.2.1 | None | ERR5865075 | MDR-TB | lineage2.2.1 | None | ERR5865450 | RR-TB | lineage2.2.1 | None | ERR13292561 | MDR-TB | lineage2.2.1 | None | SRR28393563 | MDR-TB | lineage4.3.3 | None | SRR29051492 | MDR-TB | lineage4.3.3 | None | ERR11798645 | MDR-TB | lineage4.3.3 | None | ERR5864254 | MDR-TB | lineage2.2.1 | None | ERR5864244 | MDR-TB | lineage2.2.1 | None | SRR14782474 | MDR-TB | lineage2.2.1 | None | ERR4011970 | MDR-TB | lineage4.2.2.2 | None | ERR5864258 | MDR-TB | lineage2.2.1 | None | ERR5864249 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287505 | MDR-TB | lineage4 | None | ERR5865424 | MDR-TB | lineage2.2.1 | None | ERR5865593 | MDR-TB | lineage2.2.1 | None | SRR10379886 | XDR-TB | lineage2.2.1 | None | ERR4812567 | MDR-TB | lineage4 | pe | ERR9119489 | MDR-TB | lineage4.6.2.2 | None | ERR5866245 | MDR-TB | lineage2.2.1 | None | SAMEA2534134 | MDR-TB | lineage4.1.2.1 | uz | ERR2677412 | MDR-TB | lineage2.2.1 | de | ERR1035202 | MDR-TB | lineage2.2.1 | pt | SRR8791316 | Pre-XDR-TB | lineage2.2.1 | None | SRR8791319 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865447 | MDR-TB | lineage2.2.1 | None | SRR16088275 | MDR-TB | lineage2.2.1 | None | SRR10379910 | MDR-TB | lineage4.3.3 | None | SRR23310824 | MDR-TB | lineage2.2.1 | None | ERR5864248 | MDR-TB | lineage2.2.1 | None | SRR024073 | Other | lineage4.1.2.1 | None | SRR10040483 | MDR-TB | lineage2.2.1 | None | ERR12307398 | MDR-TB | lineage2.2.1 | None | ERR11773794 | Pre-XDR-TB | lineage2.2.1 | None | ERR9786068 | MDR-TB | lineage2.2.1 | None | SRR6511598 | MDR-TB | lineage2.2.1 | None | SRR28351315 | MDR-TB | lineage2.2.1 | None | ERR12916910 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872319 | XDR-TB | lineage2.2.1 | None | ERR12307389 | MDR-TB | lineage2.2.1 | None | ERR5864243 | MDR-TB | lineage2.2.1 | None | SRR14781947 | MDR-TB | lineage2.2.1 | None | ERR551708_ERR551707 | MDR-TB | lineage4.1.2.1 | None | SRR26936947 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR10380194 | XDR-TB | lineage2.2.1 | None | ERR5866246 | MDR-TB | lineage2.2.1 | None | ERR5866210 | MDR-TB | lineage2.2.1 | None | SRR21576689 | MDR-TB | lineage2.1 | None | ERR551707 | MDR-TB | lineage4.1.2.1 | None | ERR11082441 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR16087958 | MDR-TB | lineage2.2.1 | None | ERR4872083 | MDR-TB | lineage4.6.2.2 | None | ERR5864246 | MDR-TB | lineage2.2.1 | None | SRR3743380 | Pre-XDR-TB | lineage4.3.3 | None | ERR11044060 | MDR-TB | lineage4.2.2.2 | None | ERR5865544 | MDR-TB | lineage2.2.1 | None | SRR14802259 | MDR-TB | lineage2.2.1 | None | ERR5864251 | MDR-TB | lineage2.2.1 | None | ERR552036 | XDR-TB | lineage4.3.3 | None | ERR9786072 | MDR-TB | lineage2.2.1 | None | ERR10762495 | MDR-TB | lineage2.2.1 | None | SRR14807637 | MDR-TB | lineage2.2.1 | None | ERR5864099 | MDR-TB | lineage2.2.1 | None | SRR25827405 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5865328 | MDR-TB | lineage2.2.1 | None | SRR3085288 | MDR-TB | lineage2.2.1 | None | ERR5864267 | HR-TB | lineage2.2.1 | None | ERR12307393 | RR-TB | lineage2.2.1 | None | SRR28434994 | Pre-XDR-TB | lineage2.2.1 | None | SRR11871413 | XDR-TB | lineage2.2.1 | None | SRR8662666 | HR-TB | lineage2.2.1 | None | SRR11972295 | MDR-TB | lineage2.2.1.1 | None | ERR7975664 | MDR-TB | lineage2.2.1 | None | SRR29093954 | MDR-TB | lineage4 | None | SRR29539007 | Pre-XDR-TB | lineage2.2.1 | None | ERR13285724 | Pre-XDR-TB | lineage2.2.1 | None | ERR551708 | MDR-TB | lineage4.1.2.1 | None | ERR11044055 | MDR-TB | lineage4.2.2.2 | None | ERR13285892 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866211 | MDR-TB | lineage2.2.1 | None | SRR3086364 | MDR-TB | lineage2.2.1 | None | ERR5865498 | MDR-TB | lineage2.2.1 | None | SRR23938672 | MDR-TB | lineage2.2.1 | None | ERR5865868 | Pre-XDR-TB | lineage2.2.1 | None | SRR10397122 | MDR-TB | lineage2.2.1 | None | SRR23310986 | HR-TB | lineage2.2.1 | None | ERR13232478 | Pre-XDR-TB | lineage2.2.2 | None | ERR10796641 | MDR-TB | lineage2.2.1 | None | SRR14782715 | XDR-TB | lineage2.2.1 | None | ERR1034629 | MDR-TB | lineage2.2.1 | None | ERR13273279 | MDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR4797755 | MDR-TB | lineage3 | in | ERR4822405 | MDR-TB | lineage2.2.1 | ua | ERR13341320 | MDR-TB | lineage2.2.1 | None | ERR5864097 | MDR-TB | lineage2.2.1 | None | SRR6511590 | MDR-TB | lineage2.2.1 | None | ERR10762347 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762492 | MDR-TB | lineage2.2.1 | None | ERR2864296 | MDR-TB | lineage2.2.1 | pt | ERR2864235 | MDR-TB | lineage2.2.1 | pt | ERR2864252 | MDR-TB | lineage2.2.1 | pt | SRR14782518 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351424 | XDR-TB | lineage2.2.1 | None | SRR28351314 | MDR-TB | lineage2.2.1 | None | ERR12916918 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | SRR26965296 | MDR-TB | lineage2.2.1 | None | ERR7911253 | MDR-TB | lineage2.2.1 | md | SRR28393342 | MDR-TB | lineage4.8 | None | SRR28435005 | MDR-TB | lineage2.2.1 | None | SRR26965297 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498559 | XDR-TB | lineage2.2.1 | None | SRR26965298 | MDR-TB | lineage2.2.1 | None | SRR26965295 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865087 | MDR-TB | lineage2.2.1 | None | ERR4831466 | MDR-TB | lineage4.1.1.3 | None | ERR4822497 | MDR-TB | lineage4.2.2.2 | de | ERR7911416 | Pre-XDR-TB | lineage2.2.1 | us | ERR7911415 | Pre-XDR-TB | lineage2.2.1 | us | ERR7911712 | MDR-TB | lineage2.2.1 | us | ERR7911044 | MDR-TB | lineage2.2.1 | md | SRR16088196 | MDR-TB | lineage2.2.1 | None | ERR2516502 | MDR-TB | lineage4.8 | pe | ERR2041784 | RR-TB | lineage4.4.1.1 | rs | SRR6824683 | MDR-TB | lineage4.4.2 | cn | ERR9786828 | MDR-TB | lineage2.2.1;lineage4.1.4 | None | SRR14801937 | MDR-TB | lineage2.2.1 | None | ERR12307388 | MDR-TB | lineage2.2.1 | None | ERR1034826 | MDR-TB | lineage2.2.1 | pt | ERR5864096 | MDR-TB | lineage2.2.1 | None | ERR5864262 | MDR-TB | lineage2.2.1 | None | ERR12037327 | MDR-TB | lineage2.2.1 | None | ERR5864259 | MDR-TB | lineage2.2.1 | None | ERR5865122 | MDR-TB | lineage2.2.1 | None | ERR13275900 | MDR-TB | lineage2.2.1 | None | SRR21887767 | MDR-TB | lineage2.2.1 | None | SRR3085285 | MDR-TB | lineage2.2.1 | None | ERR5865545 | MDR-TB | lineage2.2.1 | None | ERR5865120 | MDR-TB | lineage2.2.1 | None | SRR10040472 | MDR-TB | lineage2.2.1 | None | SRR13583433 | MDR-TB | lineage4.3.3 | None | ERR4830175 | MDR-TB | lineage2.2.1 | None | ERR7737787 | MDR-TB | lineage2.2.1 | None | ERR4830023 | MDR-TB | lineage2.2.1 | None | SRR24710249 | MDR-TB | lineage4.3.3 | None | SRR6384965 | Pre-XDR-TB | lineage2.2.1 | None | ERR2516188 | MDR-TB | lineage2.2.1 | be | SRR10397095 | MDR-TB | lineage2.2.1 | None | ERR5864260 | MDR-TB | lineage2.2.1 | None | SRR28389905 | MDR-TB | lineage4.4.1.1 | None | SRR28681415 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865076 | MDR-TB | lineage2.2.1 | None | ERR5864245 | MDR-TB | lineage2.2.1 | None | ERR5864263 | MDR-TB | lineage2.2.1 | None | ERR12307397 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None | ERR4827901 | MDR-TB | lineage2.2.1 | None | ERR3077933 | MDR-TB | lineage4.3.4.2.1 | None | SRR16088572 | MDR-TB | lineage2.2.1 | None | ERR1036286 | MDR-TB | lineage2.2.1 | pt | ERR5864247 | MDR-TB | lineage2.2.1 | None | ERR5864261 | MDR-TB | lineage2.2.1 | None | ERR13285801 | MDR-TB | lineage2.2.1 | None | SRR6832812 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR5864257 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802104 | MDR-TB | lineage2.2.1 | None | SRR29093381 | MDR-TB | lineage2.2.1 | None | ERR13267578 | Pre-XDR-TB | lineage2.2.1 | None | ERR12307392 | Other | lineage2.2.1 | None | SRR28393270 | MDR-TB | lineage4.8 | None | ERR5865073 | MDR-TB | lineage2.2.1 | None | ERR12350670 | MDR-TB | lineage2.2.1 | None | ERR13267501 | MDR-TB | lineage2.2.1 | None | ERR5864093 | MDR-TB | lineage2.2.1 | None | ERR5864256 | MDR-TB | lineage2.2.1 | None | ERR5865449 | HR-TB | lineage2.2.1 | None | ERR5865867 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865074 | MDR-TB | lineage2.2.1 | None | ERR5865878 | Pre-XDR-TB | lineage2.2.1 | None | ERR5865879 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539505 | MDR-TB | lineage2.2.1 | None | ERR13266713 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR7755682 | Pre-XDR-TB | lineage4.2.1 | None | ERR13276248 | MDR-TB | lineage3 | None | SRR16087898 | Pre-XDR-TB | lineage2.2.1 | None | ERR4352120 | MDR-TB | lineage2.2.1 | None | ERR13284099 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR5865090 | MDR-TB | lineage2.2.1 | None | ERR5865499 | MDR-TB | lineage2.2.1 | None | ERR5864094 | MDR-TB | lineage2.2.1 | None | SRR21887666 | MDR-TB | lineage2.2.1 | None | ERR5866572 | MDR-TB | lineage2.2.1 | None | SRR7516399 | Pre-XDR-TB | lineage2.2.1 | None | SRR8330048 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276187 | MDR-TB | lineage4.2.2.2 | None | ERR13341319 | MDR-TB | lineage2.2.1 | None | ERR13276384 | MDR-TB | lineage2.2.1 | None | ERR7975643 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276029 | Pre-XDR-TB | lineage2.2.1 | None | ERR4827887 | MDR-TB | lineage2.2.1 | None | SRR25207008 | MDR-TB | lineage2.2.2 | None | ERR5865089 | MDR-TB | lineage2.2.1 | None | ERR5865448 | MDR-TB | lineage2.2.1 | None | SRR14807570 | MDR-TB | lineage2.2.1 | None | ERR4872309 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872303 | XDR-TB | lineage2.2.1 | None | ERR5864264 | MDR-TB | lineage2.2.1 | None | SRR23310844 | MDR-TB | lineage2.2.1 | None | SRR25827404 | Pre-XDR-TB | lineage2.2.1.1;lineage3 | None | ERR9119509 | Pre-XDR-TB | lineage4.3.3 | None | ERR275226 | MDR-TB | lineage2.2.1 | pt | SRR24828612 | XDR-TB | lineage2.2.1 | None | SRR14802216 | XDR-TB | lineage2.2.1 | None | SRR14782160 | XDR-TB | lineage2.2.1 | None | ERR4830041 | MDR-TB | lineage2.2.1 | None | SRR28681416 | MDR-TB | lineage2.2.1 | None | SRR3086354 | MDR-TB | lineage4.2.1 | None | SRR28239428 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827565 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1 | None | SRR28498508 | Pre-XDR-TB | lineage4.2.1 | None | ERR12311980 | MDR-TB | lineage2.2.1 | None | SRR25827530 | XDR-TB | lineage2.2.1;lineage4 | None | SRR27069375 | Pre-XDR-TB | lineage2.2.1 | None | SRR7516294 | MDR-TB | lineage2.2.1 | None | ERR11044660 | MDR-TB | lineage2.2.1 | None | ERR5864101 | MDR-TB | lineage2.2.1 | None | SRR7516398 | MDR-TB | lineage2.2.1 | None |
|---|
