ERR10610361
|
MDR-TB
|
lineage4.8
|
None
|
ERR13289355
|
XDR-TB
|
lineage4.8
|
None
|
ERR11488918
|
MDR-TB
|
lineage4.8
|
None
|
SRR1165328
|
MDR-TB
|
lineage4.1.1.3;lineage4.8
|
None
|
ERR9993131
|
XDR-TB
|
lineage4.8
|
None
|
SRR9971337
|
MDR-TB
|
lineage4.8
|
None
|
SRR10147711
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR11662199
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11080916
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173861
|
MDR-TB
|
lineage4.1.1.3;lineage4.8
|
None
|
ERR9992934
|
XDR-TB
|
lineage4.8
|
None
|
SRR1175511
|
MDR-TB
|
lineage4.8
|
None
|
ERR9806691
|
MDR-TB
|
lineage4.8
|
None
|
ERR9992931
|
XDR-TB
|
lineage4.8
|
None
|
ERR9993064
|
XDR-TB
|
lineage4.8
|
None
|
ERR13260611
|
HR-TB
|
lineage4.3.3
|
None
|
SRR29055906
|
MDR-TB
|
lineage4.8
|
None
|
ERR9806668
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971362
|
MDR-TB
|
lineage4.8
|
None
|
ERR11773742
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02350419
|
Pre-XDR-TB
|
lineage4.8
|
za
|
SRR10315652
|
MDR-TB
|
lineage4.8
|
None
|
ERR4822398
|
Pre-XDR-TB
|
lineage2.2.1
|
ua
|
SAMN02403622
|
MDR-TB
|
lineage4.8
|
za
|
SRR29231744
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SAMN02350437
|
MDR-TB
|
lineage4.8
|
None
|
SRR1011459
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR1167279
|
MDR-TB
|
lineage4.1.1.3;lineage4.8
|
None
|
SRR1175517
|
MDR-TB
|
lineage4.8
|
None
|
ERR017786
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29539741
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284074
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29055622
|
MDR-TB
|
lineage4.8
|
None
|
SRR29231861
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR29231311
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR10303327
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13284033
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1165666
|
MDR-TB
|
lineage4.8
|
None
|
ERR6362920
|
MDR-TB
|
lineage4.8
|
None
|
SRR1062852
|
MDR-TB
|
lineage4.8
|
None
|
SRR29772661
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR13284415
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR1175521
|
MDR-TB
|
lineage4.8
|
None
|
ERR13284108
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1165701
|
MDR-TB
|
lineage4.8
|
None
|
ERR13284595
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173443
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR24256380
|
MDR-TB
|
lineage4.3.3
|
None
|
ERR9993012
|
XDR-TB
|
lineage4.8
|
None
|
SRR15014741
|
MDR-TB
|
lineage1.1.2
|
None
|
SRR1196498
|
MDR-TB
|
lineage4.8
|
None
|
ERR11082874
|
MDR-TB
|
lineage2.2.1
|
None
|
SAMN02403613
|
MDR-TB
|
lineage4.8
|
za
|
ERR11775604
|
MDR-TB
|
lineage4.8
|
None
|
ERR11773804
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2707210
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR10610150
|
MDR-TB
|
lineage4.8
|
None
|
ERR7911435
|
MDR-TB
|
lineage4.8
|
za
|
ERR10748545
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02403598
|
MDR-TB
|
lineage4.8
|
za
|
SRR10315603
|
MDR-TB
|
lineage4.8
|
None
|
SRR1062851
|
MDR-TB
|
lineage4.8
|
None
|
SRR1184362
|
MDR-TB
|
lineage4.8
|
None
|
SRR1174827
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02350418
|
Pre-XDR-TB
|
lineage4.8
|
za
|
SAMN02350438
|
MDR-TB
|
lineage4.8
|
za
|
SAMN02586042
|
MDR-TB
|
lineage4.8
|
za
|
SRR7585398
|
Pre-XDR-TB
|
lineage3
|
in
|
ERR2516329
|
MDR-TB
|
lineage4.3.4.2
|
be
|
ERR4831838
|
HR-TB
|
lineage2.2.1.1
|
vn
|
ERR2515713
|
MDR-TB
|
lineage4.8
|
za
|
ERR4830480
|
MDR-TB
|
lineage4.8
|
za
|
SRR29385258
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR551484
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR6326069
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SAMN01828247
|
MDR-TB
|
lineage4.8
|
za
|
ERR10748468
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02586039
|
MDR-TB
|
lineage4.8
|
za
|
SRR28498623
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR7517735
|
MDR-TB
|
lineage4.3.4.2
|
ch
|
SRR10315640
|
MDR-TB
|
lineage4.8
|
None
|
SRR1172261
|
MDR-TB
|
lineage4.8
|
None
|
SRR5067605
|
HR-TB
|
lineage2.2.1.1
|
vn
|
ERR4797275
|
MDR-TB
|
lineage1.2.2.2
|
in
|
ERR552808
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1169081
|
MDR-TB
|
lineage4.8
|
None
|
SRR1169213
|
MDR-TB
|
lineage4.8
|
None
|
ERR4822321
|
Pre-XDR-TB
|
lineage2.2.1
|
de
|
SRR1723591
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR25207064
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1175510
|
MDR-TB
|
lineage4.8
|
None
|
ERR9119823
|
MDR-TB
|
lineage4.8
|
None
|
SRR1011481
|
MDR-TB
|
lineage4.8
|
None
|
SRR833004
|
MDR-TB
|
lineage4.8
|
None
|
ERR10748205
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971178
|
MDR-TB
|
lineage4.8
|
None
|
ERR7737818
|
MDR-TB
|
lineage4.8
|
None
|
ERR2307379
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1165276
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR7737925
|
MDR-TB
|
lineage4.8
|
None
|
SRR1173278
|
MDR-TB
|
lineage4.8
|
None
|
SRR10315476
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971364
|
MDR-TB
|
lineage4.8
|
None
|
SRR25827323
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SAMN02403623
|
MDR-TB
|
lineage4.8
|
za
|
SRR9971094
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971175
|
MDR-TB
|
lineage4.8
|
None
|
SRR1167294
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR29231305
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR9971152
|
MDR-TB
|
lineage4.8
|
None
|
SRR1165697
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971133
|
MDR-TB
|
lineage4.8
|
None
|
ERR3256119
|
MDR-TB
|
lineage1.2.1.2.1
|
ph
|
ERR5530521
|
Pre-XDR-TB
|
lineage4.3.4.1
|
None
|
SRR1165719
|
MDR-TB
|
lineage4.8
|
None
|
SRR8351971
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6855777
|
MDR-TB
|
lineage4.8
|
None
|
SRR9970998
|
MDR-TB
|
lineage4.8
|
None
|
SRR833005
|
MDR-TB
|
lineage4.8
|
None
|
SRR1173252
|
MDR-TB
|
lineage4.8
|
None
|
SRR10430379
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29231768
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR1169293
|
MDR-TB
|
lineage4.8
|
None
|
ERR10748219
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971186
|
Pre-XDR-TB
|
lineage4.3.2
|
None
|
SRR28351302
|
MDR-TB
|
lineage4.2.1
|
None
|
SRR10315475
|
MDR-TB
|
lineage4.8
|
None
|
ERR13284768
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29385470
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR11044256
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1167269
|
MDR-TB
|
lineage4.8
|
None
|
ERR13288738
|
MDR-TB
|
lineage4.8
|
None
|
SRR29056360
|
MDR-TB
|
lineage4.8
|
None
|
SRR6356974
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10610319
|
Other
|
lineage4.8
|
None
|
SRR20969521
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR7361991
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SAMN02586007
|
MDR-TB
|
lineage4.8
|
za
|
SRR9971278
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR9806763
|
Other
|
lineage4.8
|
None
|
ERR551485
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1175083
|
MDR-TB
|
lineage4.8
|
None
|
SRR1184341
|
MDR-TB
|
lineage4.8
|
None
|
ERR2707204
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR11488993
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR9971298
|
MDR-TB
|
lineage4.8
|
None
|
ERR4830746
|
MDR-TB
|
lineage2.2.1
|
ir
|
ERR2515202
|
MDR-TB
|
lineage4.8
|
za
|
ERR8975853
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8975812
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR8975915
|
XDR-TB
|
lineage4.8
|
None
|
SRR1184295
|
MDR-TB
|
lineage4.8
|
None
|
SRR13180309
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR3273132
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR13439909
|
HR-TB
|
lineage2.2.1.1
|
None
|
SRR1169201
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02403509
|
Pre-XDR-TB
|
lineage4.8
|
za
|
SRR21887669
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR833047
|
MDR-TB
|
lineage4.8
|
None
|
SRR8847011
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR671757
|
RR-TB
|
lineage4.5
|
cn
|
ERR10680172
|
RR-TB
|
lineage5.1.5
|
None
|
SRR1175469
|
MDR-TB
|
lineage4.8
|
None
|
SRR14782147
|
HR-TB
|
lineage4.2.1
|
None
|
SAMN02403612
|
MDR-TB
|
lineage4.8
|
za
|
SRR10315474
|
MDR-TB
|
lineage4.8
|
None
|
SRR1173248
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR1062829
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR553142
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173785
|
MDR-TB
|
lineage4.8
|
None
|
ERR11488699
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR1062832
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR3148045
|
Pre-XDR-TB
|
lineage4.4.1.1
|
None
|
SRR1011480
|
MDR-TB
|
lineage4.8
|
None
|
ERR11488539
|
MDR-TB
|
lineage4.3.2
|
None
|
SRR1173724
|
MDR-TB
|
lineage4.1.1.3;lineage4.8
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR1165265
|
MDR-TB
|
lineage4.8
|
None
|
SRR8426987
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1169331
|
MDR-TB
|
lineage4.8
|
None
|
ERR867535
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9992930
|
XDR-TB
|
lineage4.8
|
None
|
ERR13288980
|
MDR-TB
|
lineage4.8
|
None
|
ERR4781456
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR11488853
|
MDR-TB
|
lineage4.3.2
|
None
|
ERR13289303
|
MDR-TB
|
lineage4.8
|
None
|
SRR1169149
|
MDR-TB
|
lineage4.8
|
None
|
ERR9992865
|
XDR-TB
|
lineage4.8
|
None
|
ERR13284062
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1011460
|
Pre-XDR-TB
|
lineage4.8
|
None
|
SRR29231779
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4276906
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29055940
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR29539753
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9993102
|
MDR-TB
|
lineage4.8
|
None
|
SRR10315752
|
MDR-TB
|
lineage4.8
|
None
|
ERR7737872
|
MDR-TB
|
lineage4.8
|
None
|
SRR11662553
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29055921
|
MDR-TB
|
lineage4.8
|
None
|
ERR10748170
|
MDR-TB
|
lineage4.8
|
None
|
ERR13250071
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR1167346
|
MDR-TB
|
lineage4.8
|
None
|
SRR29056168
|
MDR-TB
|
lineage4.8
|
None
|
SRR11342634
|
MDR-TB
|
lineage4.8
|
None
|
SRR29231800
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR8774356
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1165689
|
MDR-TB
|
lineage4.8
|
None
|
ERR553141
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1173088
|
MDR-TB
|
lineage4.8
|
None
|
SAMN02403599
|
MDR-TB
|
lineage4.8
|
za
|
SRR1165715
|
MDR-TB
|
lineage4.8
|
None
|
SRR833178
|
MDR-TB
|
lineage4.8
|
None
|
SRR10315576
|
MDR-TB
|
lineage4.1.1.3;lineage4.8
|
None
|
ERR867525
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1196512
|
MDR-TB
|
lineage4.8
|
None
|
ERR13290918
|
Pre-XDR-TB
|
lineage4.5
|
None
|
SAMN02403508
|
MDR-TB
|
lineage4.8
|
None
|
ERR10748186
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971046
|
MDR-TB
|
lineage4.8
|
None
|
SRR9971122
|
MDR-TB
|
lineage4.8
|
None
|
ERR2707107
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707172
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707225
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707081
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR2707136
|
MDR-TB
|
lineage4.3.4.2
|
cd
|
ERR7911205
|
MDR-TB
|
lineage4.8
|
za
|
SRR11342695
|
MDR-TB
|
lineage4.8
|
None
|
ERR11488715
|
MDR-TB
|
lineage4.8
|
None
|
ERR5865962
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1196505
|
MDR-TB
|
lineage4.8
|
None
|
SRR5266559
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR2515152
|
MDR-TB
|
lineage4.8
|
za
|
ERR2516068
|
MDR-TB
|
lineage4.8
|
za
|
ERR4831245
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR552701
|
MDR-TB
|
lineage4.8
|
sz
|
SRR6824311
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR833108
|
MDR-TB
|
lineage4.8
|
None
|
SRR1167386
|
MDR-TB
|
lineage4.8
|
None
|
ERR10869423
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13260874
|
MDR-TB
|
lineage4.8
|
None
|
DRR184619
|
MDR-TB
|
lineage2.2.1
|
vn
|