Rv2043c - p.Ser59Pro
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
4 RR-TB
5 HR-TB
177 MDR-TB
44 Pre-XDR-TB
9 XDR-TB
2 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 141 |
| lineage2.2.1 | 45 |
| lineage3 | 1 |
| lineage4.3.2 | 5 |
| lineage4.1.1.3;lineage4.8 | 5 |
| lineage2.2.1;lineage3 | 1 |
| lineage4.3.4.2 | 16 |
| lineage1.1.2 | 2 |
| lineage2.2.1.1 | 8 |
| lineage4.5 | 2 |
| lineage4.2.1 | 3 |
| lineage2.2.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.3.3 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage5.1.5 | 1 |
| lineage4.4.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 241 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR8975915 | XDR-TB | lineage4.8 | None | ERR5865962 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975853 | RR-TB | lineage2.2.1 | None | SRR1184362 | MDR-TB | lineage4.8 | None | ERR8975812 | Pre-XDR-TB | lineage4.8 | None | SRR1174827 | MDR-TB | lineage4.8 | None | SRR7585398 | Pre-XDR-TB | lineage3 | in | SRR1184295 | MDR-TB | lineage4.8 | None | SRR6824311 | MDR-TB | lineage2.2.1 | cn | SRR833108 | MDR-TB | lineage4.8 | None | ERR10748468 | MDR-TB | lineage4.8 | None | SRR10315640 | MDR-TB | lineage4.8 | None | ERR9993102 | MDR-TB | lineage4.8 | None | SRR9971337 | MDR-TB | lineage4.8 | None | ERR13289303 | MDR-TB | lineage4.8 | None | ERR9993012 | XDR-TB | lineage4.8 | None | ERR9992930 | XDR-TB | lineage4.8 | None | ERR553142 | MDR-TB | lineage2.2.1 | None | ERR10748205 | MDR-TB | lineage4.8 | None | SRR9971178 | MDR-TB | lineage4.8 | None | ERR11488699 | MDR-TB | lineage4.3.2 | None | SRR1173861 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | ERR7737925 | MDR-TB | lineage4.8 | None | SRR1175511 | MDR-TB | lineage4.8 | None | ERR9806691 | MDR-TB | lineage4.8 | None | SRR1173724 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SRR25827323 | Pre-XDR-TB | lineage2.2.1;lineage3 | None | ERR11773742 | MDR-TB | lineage4.8 | None | SRR10315652 | MDR-TB | lineage4.8 | None | SRR1169331 | MDR-TB | lineage4.8 | None | ERR867525 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR867535 | Pre-XDR-TB | lineage2.2.1 | None | SRR11342634 | MDR-TB | lineage4.8 | None | ERR13284062 | MDR-TB | lineage2.2.1 | None | SRR833005 | MDR-TB | lineage4.8 | None | SRR10303327 | MDR-TB | lineage2.2.1 | None | SRR1173252 | MDR-TB | lineage4.8 | None | SRR10430379 | MDR-TB | lineage2.2.1 | None | SAMN02350437 | MDR-TB | lineage4.8 | None | SRR29231768 | MDR-TB | lineage4.3.4.2 | None | SRR1169293 | MDR-TB | lineage4.8 | None | ERR10748219 | MDR-TB | lineage4.8 | None | SRR29772661 | MDR-TB | lineage1.1.2 | None | SRR1167346 | MDR-TB | lineage4.8 | None | SRR29056168 | MDR-TB | lineage4.8 | None | ERR13284108 | MDR-TB | lineage2.2.1 | None | SRR9971046 | MDR-TB | lineage4.8 | None | SRR1173443 | Pre-XDR-TB | lineage4.8 | None | SRR1165689 | MDR-TB | lineage4.8 | None | SRR1167269 | MDR-TB | lineage4.8 | None | ERR11082874 | MDR-TB | lineage2.2.1 | None | SRR20969521 | MDR-TB | lineage2.2.1.1 | None | ERR7361991 | Pre-XDR-TB | lineage4.8 | None | SRR1196512 | MDR-TB | lineage4.8 | None | ERR13290918 | Pre-XDR-TB | lineage4.5 | None | SAMN02586007 | MDR-TB | lineage4.8 | za | SAMN02403599 | MDR-TB | lineage4.8 | za | ERR551485 | MDR-TB | lineage2.2.1 | None | SRR1175083 | MDR-TB | lineage4.8 | None | SRR1184341 | MDR-TB | lineage4.8 | None | ERR10748186 | MDR-TB | lineage4.8 | None | ERR11773804 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831245 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822321 | Pre-XDR-TB | lineage2.2.1 | de | ERR2707107 | MDR-TB | lineage4.3.4.2 | cd | ERR2707210 | MDR-TB | lineage4.3.4.2 | cd | ERR2707081 | MDR-TB | lineage4.3.4.2 | cd | ERR2707136 | MDR-TB | lineage4.3.4.2 | cd | ERR7911205 | MDR-TB | lineage4.8 | za | SRR11342695 | MDR-TB | lineage4.8 | None | ERR10748545 | MDR-TB | lineage4.8 | None | SRR1062851 | MDR-TB | lineage4.8 | None | SRR9971298 | MDR-TB | lineage4.8 | None | SRR1196505 | MDR-TB | lineage4.8 | None | SRR5266559 | MDR-TB | lineage2.2.1 | ru | ERR2516068 | MDR-TB | lineage4.8 | za | SAMN01828247 | MDR-TB | lineage4.8 | za | SAMN02586039 | MDR-TB | lineage4.8 | za | ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None | SRR28498623 | MDR-TB | lineage4.2.1 | None | ERR3273132 | Pre-XDR-TB | lineage2.2.2 | None | SRR7517735 | MDR-TB | lineage4.3.4.2 | ch | ERR13260874 | MDR-TB | lineage4.8 | None | ERR13439909 | HR-TB | lineage2.2.1.1 | None | SRR1169201 | MDR-TB | lineage4.8 | None | SRR1172261 | MDR-TB | lineage4.8 | None | SAMN02403509 | Pre-XDR-TB | lineage4.8 | za | SRR5067605 | HR-TB | lineage2.2.1.1 | vn | SRR21887669 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR833047 | MDR-TB | lineage4.8 | None | SRR8847011 | MDR-TB | lineage2.2.1 | None | SRR14782147 | HR-TB | lineage4.2.1 | None | SRR10315474 | MDR-TB | lineage4.8 | None | ERR9992865 | XDR-TB | lineage4.8 | None | SRR25207064 | Pre-XDR-TB | lineage2.2.1 | None | ERR13288980 | MDR-TB | lineage4.8 | None | ERR2516329 | MDR-TB | lineage4.3.4.2 | be | ERR9119823 | MDR-TB | lineage4.8 | None | SRR1011481 | MDR-TB | lineage4.8 | None | ERR2515202 | MDR-TB | lineage4.8 | za | SRR10147711 | MDR-TB | lineage2.2.1 | None | SRR833004 | MDR-TB | lineage4.8 | None | SRR1173248 | Pre-XDR-TB | lineage4.8 | None | ERR3256119 | MDR-TB | lineage1.2.1.2.1 | ph | SRR1173785 | MDR-TB | lineage4.8 | None | ERR7737818 | MDR-TB | lineage4.8 | None | ERR11080916 | MDR-TB | lineage2.2.1 | None | ERR2307379 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165276 | Pre-XDR-TB | lineage4.8 | None | SRR1173278 | MDR-TB | lineage4.8 | None | ERR9992934 | XDR-TB | lineage4.8 | None | SRR29231779 | MDR-TB | lineage4.3.4.2 | None | SRR29231800 | MDR-TB | lineage4.3.4.2 | None | SRR1011480 | MDR-TB | lineage4.8 | None | ERR11488539 | MDR-TB | lineage4.3.2 | None | SRR9971364 | MDR-TB | lineage4.8 | None | ERR9992931 | XDR-TB | lineage4.8 | None | ERR13260611 | HR-TB | lineage4.3.3 | None | SRR29055906 | MDR-TB | lineage4.8 | None | SRR1165265 | MDR-TB | lineage4.8 | None | SRR8426987 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971362 | MDR-TB | lineage4.8 | None | SRR9971094 | MDR-TB | lineage4.8 | None | SRR9971175 | MDR-TB | lineage4.8 | None | SRR10315476 | MDR-TB | lineage4.8 | None | SRR1165697 | MDR-TB | lineage4.8 | None | SRR9971133 | MDR-TB | lineage4.8 | None | SRR10315475 | MDR-TB | lineage4.8 | None | ERR4781456 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR5530521 | Pre-XDR-TB | lineage4.3.4.1 | None | ERR11488853 | MDR-TB | lineage4.3.2 | None | SRR1169149 | MDR-TB | lineage4.8 | None | SRR8351971 | Pre-XDR-TB | lineage2.2.1 | None | ERR6326069 | Pre-XDR-TB | lineage4.3.4.1 | None | SRR29231861 | MDR-TB | lineage4.3.4.2 | None | SRR29231311 | MDR-TB | lineage4.3.4.2 | None | SRR1165666 | MDR-TB | lineage4.8 | None | SRR29055940 | RR-TB | lineage4.1.1.3 | None | SRR29539753 | Pre-XDR-TB | lineage2.2.1 | None | SRR10315752 | MDR-TB | lineage4.8 | None | SRR9971186 | Pre-XDR-TB | lineage4.3.2 | None | SRR1175521 | MDR-TB | lineage4.8 | None | SRR29385470 | MDR-TB | lineage2.2.1.1 | None | ERR11044256 | MDR-TB | lineage2.2.1 | None | ERR4797275 | MDR-TB | lineage1.2.2.2 | in | SRR24256380 | MDR-TB | lineage4.3.3 | None | ERR4822398 | Pre-XDR-TB | lineage2.2.1 | ua | SRR1165715 | MDR-TB | lineage4.8 | None | SRR29056360 | MDR-TB | lineage4.8 | None | SRR1196498 | MDR-TB | lineage4.8 | None | SRR10315576 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SAMN02403613 | MDR-TB | lineage4.8 | za | SAMN02403598 | MDR-TB | lineage4.8 | za | SRR9971278 | Pre-XDR-TB | lineage4.8 | None | ERR11775604 | MDR-TB | lineage4.8 | None | ERR4830480 | MDR-TB | lineage4.8 | za | ERR2707172 | MDR-TB | lineage4.3.4.2 | cd | ERR2707225 | MDR-TB | lineage4.3.4.2 | cd | ERR4830746 | MDR-TB | lineage2.2.1 | ir | ERR11488993 | MDR-TB | lineage4.3.2 | None | SAMN02350418 | Pre-XDR-TB | lineage4.8 | za | SAMN02350438 | MDR-TB | lineage4.8 | za | SAMN02586042 | MDR-TB | lineage4.8 | za | ERR552701 | MDR-TB | lineage4.8 | sz | SRR1167386 | MDR-TB | lineage4.8 | None | SRR29385258 | MDR-TB | lineage2.2.1.1 | None | ERR551484 | MDR-TB | lineage2.2.1 | None | SRR13180309 | Pre-XDR-TB | lineage2.2.1 | None | DRR184619 | MDR-TB | lineage2.2.1 | vn | ERR10610361 | MDR-TB | lineage4.8 | None | ERR10680172 | RR-TB | lineage5.1.5 | None | ERR552808 | MDR-TB | lineage2.2.1 | None | ERR11488918 | MDR-TB | lineage4.8 | None | SRR1165328 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SRR1169081 | MDR-TB | lineage4.8 | None | SRR1169213 | MDR-TB | lineage4.8 | None | SRR1175469 | MDR-TB | lineage4.8 | None | ERR9993131 | XDR-TB | lineage4.8 | None | SRR1175510 | MDR-TB | lineage4.8 | None | ERR2515713 | MDR-TB | lineage4.8 | za | ERR13289355 | XDR-TB | lineage4.8 | None | ERR2515152 | MDR-TB | lineage4.8 | za | SRR11662199 | MDR-TB | lineage2.2.1 | None | SRR1062829 | Pre-XDR-TB | lineage4.8 | None | SRR1062832 | Pre-XDR-TB | lineage4.8 | None | ERR3148045 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR1723591 | MDR-TB | lineage2.2.1 | cn | ERR9993064 | XDR-TB | lineage4.8 | None | ERR9806668 | MDR-TB | lineage4.8 | None | SRR1167294 | Pre-XDR-TB | lineage4.8 | None | SRR29231305 | MDR-TB | lineage4.3.4.2 | None | SRR29231744 | MDR-TB | lineage4.3.4.2 | None | SRR9971152 | MDR-TB | lineage4.8 | None | SRR1011459 | Pre-XDR-TB | lineage4.8 | None | SRR1167279 | MDR-TB | lineage4.1.1.3;lineage4.8 | None | SRR1175517 | MDR-TB | lineage4.8 | None | SRR10315603 | MDR-TB | lineage4.8 | None | ERR017786 | MDR-TB | lineage2.2.1 | None | SRR29539741 | Pre-XDR-TB | lineage2.2.1 | None | SRR1165719 | MDR-TB | lineage4.8 | None | ERR13284074 | MDR-TB | lineage2.2.1 | None | SRR29055622 | MDR-TB | lineage4.8 | None | SAMN02403508 | MDR-TB | lineage4.8 | None | SRR6855777 | MDR-TB | lineage4.8 | None | SRR9970998 | MDR-TB | lineage4.8 | None | SRR1011460 | Pre-XDR-TB | lineage4.8 | None | ERR13284033 | Pre-XDR-TB | lineage2.2.1 | None | ERR4276906 | Pre-XDR-TB | lineage2.2.1 | None | ERR6362920 | MDR-TB | lineage4.8 | None | SRR1062852 | MDR-TB | lineage4.8 | None | ERR7737872 | MDR-TB | lineage4.8 | None | SRR11662553 | MDR-TB | lineage2.2.1 | None | SRR29055921 | MDR-TB | lineage4.8 | None | ERR10748170 | MDR-TB | lineage4.8 | None | ERR13250071 | Pre-XDR-TB | lineage4.3.3 | None | ERR13284415 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR28351302 | MDR-TB | lineage4.2.1 | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR1165701 | MDR-TB | lineage4.8 | None | ERR13284768 | MDR-TB | lineage2.2.1 | None | ERR13284595 | MDR-TB | lineage2.2.1 | None | ERR8774356 | Pre-XDR-TB | lineage2.2.1 | None | ERR553141 | MDR-TB | lineage2.2.1 | None | SRR1173088 | MDR-TB | lineage4.8 | None | ERR13288738 | MDR-TB | lineage4.8 | None | SRR15014741 | MDR-TB | lineage1.1.2 | None | SRR833178 | MDR-TB | lineage4.8 | None | SRR6356974 | MDR-TB | lineage2.2.1 | None | ERR10610319 | Other | lineage4.8 | None | SAMN02350419 | Pre-XDR-TB | lineage4.8 | za | SAMN02403612 | MDR-TB | lineage4.8 | za | SAMN02403622 | MDR-TB | lineage4.8 | za | SAMN02403623 | MDR-TB | lineage4.8 | za | SRR671757 | RR-TB | lineage4.5 | cn | ERR9806763 | Other | lineage4.8 | None | ERR2707204 | MDR-TB | lineage4.3.4.2 | cd | ERR10610150 | MDR-TB | lineage4.8 | None | ERR7911435 | MDR-TB | lineage4.8 | za | ERR4831838 | HR-TB | lineage2.2.1.1 | vn | ERR11488715 | MDR-TB | lineage4.8 | None |
|---|
