Rv2043c - p.Val139Ala
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
7 RR-TB
16 HR-TB
250 MDR-TB
273 Pre-XDR-TB
29 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 210 |
| lineage2.2.1.1 | 165 |
| lineage4.3.4.2 | 18 |
| lineage1.2.2.2 | 5 |
| lineage2.2.1;lineage4.2.1.1 | 1 |
| lineage4.1.1.1;lineage4.3.4.2 | 3 |
| lineage4.2.1 | 3 |
| lineage4.1;lineage6.3.1 | 1 |
| lineage3 | 34 |
| lineage4.6.1.2 | 6 |
| lineage4.8 | 14 |
| lineage2.2.1;lineage3.1.2 | 1 |
| lineage4.1.3 | 5 |
| lineage3.1.2 | 4 |
| lineage4.2.1.1 | 6 |
| lineage2.2.1.1;lineage4.8 | 1 |
| lineage2.2.1.1;lineage4.6.1 | 4 |
| lineage4.9 | 2 |
| lineage4.2.2.2 | 11 |
| 4 | |
| lineage4.3.4.1 | 1 |
| lineage2.1 | 1 |
| lineage2.2.2 | 14 |
| lineage4.1.1.3 | 8 |
| lineage4.4.1.1.1 | 7 |
| lineage1.1.2 | 4 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2.1 | 11 |
| lineage2.2.1;lineage4.3.3 | 5 |
| lineage4.3.2.1 | 3 |
| lineage4.4.2 | 2 |
| lineage1.1.1 | 1 |
| lineage4.2.2 | 2 |
| lineage2.2.1.1;lineage4.6.2.1 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.1.1 | 4 |
| lineage4 | 3 |
| lineage1.2.1.2.1 | 2 |
| lineage1.1.2;lineage2.2.1.1 | 1 |
| lineage4.7 | 1 |
| lineage2.2.1.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.2.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 575 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11662703 | MDR-TB | lineage2.2.1 | None | SRR21887741 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800634 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266564 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21576672 | MDR-TB | lineage2.2.1 | None | ERR13284263 | MDR-TB | lineage2.2.1 | None | ERR13261141 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22175207 | MDR-TB | lineage2.2.1.1 | None | SRR25827644 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR12117986 | MDR-TB | lineage4.3.4.2 | None | SRR29017381 | MDR-TB | lineage1.2.2.2 | None | SRR29539120 | MDR-TB | lineage2.2.1 | None | SRR29681264 | Pre-XDR-TB | lineage2.2.1;lineage4.2.1.1 | None | ERR5866126 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261505 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29017140 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR3287501 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR16370526 | MDR-TB | lineage2.2.1 | None | ERR11043922 | MDR-TB | lineage2.2.1 | None | ERR13267013 | MDR-TB | lineage2.2.1.1 | None | ERR13261114 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR403303 | MDR-TB | lineage2.2.1 | None | ERR4827821 | Pre-XDR-TB | lineage2.2.1 | None | SRR6807712 | Pre-XDR-TB | lineage4.2.1 | None | SRR998600 | HR-TB | lineage4.1;lineage6.3.1 | None | ERR4553540 | HR-TB | lineage3 | None | ERR6358863 | MDR-TB | lineage4.6.1.2 | None | ERR13284950 | MDR-TB | lineage4.8 | None | SRR7755680 | Pre-XDR-TB | lineage4.2.1 | None | SRR29539416 | MDR-TB | lineage2.2.1 | None | SRR25827311 | MDR-TB | lineage2.2.1.1 | None | SRR24256108 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232425 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827868 | Pre-XDR-TB | lineage2.2.1;lineage3.1.2 | None | SRR998845 | MDR-TB | lineage4.1.3 | None | ERR13261198 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266543 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR15316590 | MDR-TB | lineage2.2.1 | None | ERR11080964 | MDR-TB | lineage4.8 | None | SRR29289322 | XDR-TB | lineage3 | None | SRR14088377 | Pre-XDR-TB | lineage3 | None | ERR13266700 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4798593 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796502 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796566 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796374 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796586 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797542 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797531 | Pre-XDR-TB | lineage3.1.2 | in | ERR4796989 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798334 | MDR-TB | lineage4.8 | in | ERR4798610 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799137 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13262017 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4799665 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797511 | MDR-TB | lineage2.2.1.1 | in | ERR4799698 | MDR-TB | lineage2.2.1.1 | in | ERR13283988 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799829 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800395 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR551634_ERR551635 | RR-TB | lineage4.8 | None | SRR29539275 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR4800515 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR24710042 | MDR-TB | lineage2.2.1 | None | ERR4797378 | XDR-TB | lineage2.2.1.1 | in | SRR26331613 | Pre-XDR-TB | lineage1.2.2.2 | None | ERR4797478 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR25827498 | Pre-XDR-TB | lineage2.2.1.1;lineage4.8 | None | SRR11567806 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256259 | Pre-XDR-TB | lineage2.2.1 | None | SRR29231796 | MDR-TB | lineage4.6.1.2 | None | ERR11067557 | HR-TB | lineage2.2.1 | None | ERR13291063 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043793 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798046 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800569 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798508 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29539684 | MDR-TB | lineage2.2.1 | None | ERR4798860 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1173873 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | SRR29096323 | MDR-TB | lineage3 | None | ERR4800004 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR16088057 | Pre-XDR-TB | lineage2.2.1 | None | ERR10680183 | MDR-TB | lineage4.9 | None | SAMN02414962 | MDR-TB | lineage4.2.2.2 | se | ERR4553429 | HR-TB | None | ERR3287767 | MDR-TB | lineage4.3.4.2 | pe | SRR28706456 | MDR-TB | lineage2.2.1 | None | ERR12916916 | XDR-TB | lineage2.2.1 | None | SRR28393359 | MDR-TB | lineage4.3.4.2 | None | ERR4813417 | MDR-TB | lineage4.3.4.2 | pe | SRR28393332 | MDR-TB | lineage4.3.4.1 | None | SRR28706593 | MDR-TB | lineage2.2.1 | None | SRR28393358 | MDR-TB | lineage4.3.4.2 | None | SRR28044928 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4831602 | MDR-TB | lineage2.1 | vn | ERR5918009 | XDR-TB | lineage2.2.2 | za | ERR6358858 | MDR-TB | lineage4.6.1.2 | None | ERR4811487 | MDR-TB | lineage2.2.1 | cn | ERR4813199 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR4831024 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR4830580 | MDR-TB | lineage2.2.1 | tm | ERR7975666 | MDR-TB | lineage2.2.1 | None | ERR8975498 | MDR-TB | lineage4.4.1.1.1 | None | SRR25389453 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8975724 | XDR-TB | lineage4.4.1.1.1 | None | ERR2510593 | HR-TB | lineage1.1.2 | None | ERR9992838 | XDR-TB | lineage4.4.1.1.1 | None | SRR13232740 | XDR-TB | lineage2.2.1 | None | SRR15368788 | MDR-TB | lineage2.2.1 | None | SRR2099949 | MDR-TB | lineage4.1.1.3 | None | ERR067643 | MDR-TB | lineage2.2.1 | ru | ERR144619 | MDR-TB | lineage2.2.1 | ru | ERR067761 | Pre-XDR-TB | lineage2.2.1 | ru | ERR229984 | Pre-XDR-TB | lineage2.2.1 | ru | ERR229931 | MDR-TB | lineage2.2.1 | ru | ERR228042 | MDR-TB | lineage2.2.1;lineage4 | ru | ERR2516961 | MDR-TB | lineage4.1.1.3 | gb | ERR2516607 | MDR-TB | lineage4.1.2.1 | nl | ERR2513770 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR2513852 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR6044837 | Pre-XDR-TB | lineage2.2.1.1 | gb | SRR13232781 | XDR-TB | lineage2.2.1 | None | ERR13260021 | MDR-TB | lineage3 | None | ERR5866386 | MDR-TB | lineage2.2.1 | None | ERR13289435 | MDR-TB | lineage2.2.1 | None | ERR038743 | RR-TB | lineage3 | ug | ERR9992634 | XDR-TB | lineage4.4.1.1.1 | None | ERR1034788 | MDR-TB | lineage4.1.2.1 | pe | ERR13266575 | XDR-TB | lineage2.2.1.1 | None | ERR5866385 | MDR-TB | lineage2.2.1 | None | ERR5987260 | Pre-XDR-TB | lineage2.2.2 | None | ERR3639731 | MDR-TB | lineage2.2.1 | None | SRR6257021 | MDR-TB | lineage2.2.1 | ru | SRR20969897 | Pre-XDR-TB | lineage2.2.1 | None | SRR24256353 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232400 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR067621 | MDR-TB | lineage2.2.1 | ru | SRR24256078 | MDR-TB | lineage4.2.1.1 | None | SRR21732379 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR551635 | RR-TB | lineage4.8 | None | ERR7162978 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR10610248 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR13258458 | MDR-TB | lineage2.2.1.1 | None | SRR10040141 | MDR-TB | lineage4.4.2 | None | ERR067630 | MDR-TB | lineage2.2.1 | ru | SRR1181329 | Pre-XDR-TB | lineage2.2.1 | None | SRR8186769 | Pre-XDR-TB | lineage2.2.1 | None | SRR11567805 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173572 | MDR-TB | lineage3 | None | SRR28351275 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR22249746 | HR-TB | lineage1.1.1 | None | ERR8665744 | Pre-XDR-TB | lineage2.2.1 | None | SRR24710238 | MDR-TB | lineage2.2.1 | None | ERR9992954 | XDR-TB | lineage2.2.2 | None | SRR6458387 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266064 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1167131 | MDR-TB | lineage4.2.2.2 | None | SRR24709938 | MDR-TB | lineage2.2.1 | None | SRR28239960 | MDR-TB | lineage2.2.1 | None | ERR13266757 | Pre-XDR-TB | lineage3 | None | SRR6458419 | Pre-XDR-TB | lineage2.2.1 | None | SRR1173751 | MDR-TB | lineage3 | None | SRR18714911 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261064 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266107 | HR-TB | lineage2.2.1.1 | None | SRR12420805 | MDR-TB | lineage2.2.1 | None | SRR29539693 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175201 | XDR-TB | lineage2.2.1.1 | None | SRR16088562 | MDR-TB | lineage2.2.1 | None | SRR10040142 | MDR-TB | lineage4.2.2 | None | SRR29539562 | MDR-TB | lineage2.2.1 | None | SRR22175210 | MDR-TB | lineage2.2.1.1 | None | SRR1162531 | Pre-XDR-TB | lineage2.2.1 | None | ERR9120023 | Pre-XDR-TB | lineage2.2.2 | None | SRR10828627 | MDR-TB | lineage2.2.1 | None | ERR8665745 | Pre-XDR-TB | lineage2.2.1 | None | ERR13262151 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR24828601 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261948 | MDR-TB | lineage4.3.4.2 | None | ERR13262049 | Pre-XDR-TB | lineage4.8 | None | SRR22251490 | MDR-TB | lineage2.2.1 | None | ERR9029875 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR22175176 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13292508 | Pre-XDR-TB | lineage2.2.2 | None | SRR29538946 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866482 | MDR-TB | lineage2.2.1 | None | SRR29017058 | MDR-TB | lineage3 | None | ERR13261488 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13267087 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR24256376 | MDR-TB | lineage2.2.1 | None | DRR130055 | MDR-TB | lineage2.2.1.1 | None | SRR13232439 | Pre-XDR-TB | lineage2.2.1 | None | SRR6832565 | MDR-TB | lineage2.2.1 | None | SRR24710111 | MDR-TB | lineage2.2.1 | None | SRR29274051 | Pre-XDR-TB | lineage4.8 | None | ERR5987405 | Pre-XDR-TB | lineage2.2.2 | None | SRR25827443 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29539230 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267107 | MDR-TB | lineage2.2.1.1 | None | ERR2510295 | Pre-XDR-TB | lineage3 | pk | SRR24256012 | Pre-XDR-TB | lineage2.2.1 | None | ERR13290581 | MDR-TB | lineage4.2.2.2 | None | ERR2510438 | MDR-TB | lineage3 | pk | ERR13266622 | HR-TB | lineage2.2.1.1;lineage4.6.2.1 | None | ERR3335761 | Pre-XDR-TB | lineage3.1.3 | pk | SRR29539840 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266560 | XDR-TB | lineage2.2.1 | None | ERR13290578 | MDR-TB | lineage4.2.2.2 | None | ERR4796597 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR9120022 | Pre-XDR-TB | lineage2.2.2 | None | ERR4796469 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4796573 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29539807 | Pre-XDR-TB | lineage4.2.1.1 | None | SRR6807756 | MDR-TB | lineage2.2.1 | None | SRR21277857 | MDR-TB | lineage2.2.1 | None | ERR4796955 | MDR-TB | lineage2.2.1 | in | ERR4798146 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29772809 | MDR-TB | lineage1.1.2 | None | SRR998848 | MDR-TB | lineage4.1.3 | None | ERR4798574 | MDR-TB | lineage2.2.1.1 | in | ERR4798682 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798783 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798779 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798921 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799173 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR1173866 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | ERR4799447 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798481 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799907 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29978526 | RR-TB | lineage2.2.1 | None | ERR4799008 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799196 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799375 | MDR-TB | lineage2.2.1.1 | in | ERR4799571 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800433 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800483 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800514 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4811777 | MDR-TB | lineage4.3.4.2 | pe | ERR4829924 | HR-TB | lineage4.3.3 | it | SRR29539215 | MDR-TB | lineage2.2.1 | None | SRR8186768 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800562 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR9119545 | MDR-TB | lineage4.1.1.1 | None | SRR25207291 | MDR-TB | lineage2.2.1 | None | SAMN02628506 | MDR-TB | lineage3 | ir | ERR4827423 | MDR-TB | lineage2.2.1 | None | SRR13232559 | MDR-TB | lineage2.2.1 | None | SRR21277286 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812375 | MDR-TB | lineage4.1.1.3 | pe | SRR28351476 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28351274 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR3287858 | MDR-TB | lineage4.1.2.1 | pe | ERR4808976 | MDR-TB | lineage4.4.1.1.1 | None | SRR28394207 | MDR-TB | lineage4 | None | ERR4813011 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28351212 | XDR-TB | lineage2.2.1.1 | None | SRR998847 | MDR-TB | lineage4.1.3 | None | SRR28394298 | MDR-TB | lineage4 | None | ERR4830926 | Pre-XDR-TB | lineage2.2.1 | np | ERR4830956 | Pre-XDR-TB | lineage2.2.1.1 | np | ERR7911131 | MDR-TB | lineage2.2.1 | vn | ERR4831984 | MDR-TB | lineage2.2.1 | vn | SRR8651604 | Pre-XDR-TB | lineage2.2.1 | None | SRR2024957 | MDR-TB | lineage2.2.1 | cn | ERR8665828 | Pre-XDR-TB | lineage2.2.1 | None | ERR2707183 | MDR-TB | lineage4.6.1.2 | cd | ERR4813156 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR4813174 | Pre-XDR-TB | lineage4.1.1.3 | pe | ERR2510726 | MDR-TB | lineage4.8 | it | SRR12420474 | MDR-TB | lineage2.2.1 | None | ERR4553559 | MDR-TB | None | ERR7737625 | MDR-TB | lineage3 | None | SRR16058722 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28393785 | MDR-TB | lineage4.3.4.2 | None | SRR1158907 | Pre-XDR-TB | lineage2.2.1 | None | SRR1163208 | MDR-TB | lineage4.2.2.2 | None | SRR20969660 | MDR-TB | lineage2.2.1 | None | SRR12416834 | MDR-TB | lineage2.2.2 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SAMEA2534084 | RR-TB | lineage4.8 | uz | ERR2517122 | Pre-XDR-TB | lineage2.2.1.1 | gb | ERR4816247 | Pre-XDR-TB | lineage2.2.1 | gb | SRR15600382 | MDR-TB | lineage2.2.1.1 | None | SRR16088406 | Pre-XDR-TB | lineage2.2.1 | None | SRR29978524 | MDR-TB | lineage2.2.1 | None | ERR10225495 | MDR-TB | lineage2.2.1.1 | None | ERR4800097 | Pre-XDR-TB | lineage3 | None | ERR13266563 | MDR-TB | lineage2.2.1.1 | None | ERR13267060 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6485041 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR1035090 | MDR-TB | lineage2.2.1 | vn | SRR15316421 | MDR-TB | lineage4.2.2 | None | SAMN02419583 | Pre-XDR-TB | lineage2.2.1 | by | SRR28351585 | Pre-XDR-TB | lineage3.1.2 | None | SRR28393790 | MDR-TB | lineage4.3.4.2 | None | ERR5866127 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358871 | MDR-TB | lineage4.6.1.2 | None | SRR24710162 | Pre-XDR-TB | lineage2.2.1 | None | SRR22351865 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043952 | XDR-TB | lineage2.2.1 | None | SRR28045960 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR24256036 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799546 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR24828609 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539819 | MDR-TB | lineage2.2.1 | None | SRR7069020 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4798736 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800476 | XDR-TB | lineage2.2.1.1 | in | ERR4797034 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR18715274 | Pre-XDR-TB | lineage2.2.1 | None | ERR2515997 | MDR-TB | lineage4.4.1.1.1 | za | ERR9125456 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29016811 | MDR-TB | lineage3 | None | SRR12416845 | MDR-TB | lineage2.2.1 | None | ERR10748549 | Pre-XDR-TB | lineage2.2.2 | None | ERR8975732 | MDR-TB | lineage4.4.1.1.1 | None | SRR18715071 | Pre-XDR-TB | lineage4.2.1.1 | None | ERR11068581 | MDR-TB | lineage1.1.2 | None | SRR24710250 | MDR-TB | lineage2.2.1 | None | SRR28706413 | MDR-TB | lineage2.2.1 | None | SRR22175179 | MDR-TB | lineage2.2.1.1 | None | ERR8665695 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR6831967 | MDR-TB | lineage2.2.1 | None | ERR3256270 | Pre-XDR-TB | lineage1.2.1.2.1 | ph | ERR4799180 | Pre-XDR-TB | lineage2.2.1.1 | None | SAMEA5569694 | MDR-TB | lineage4.1.1.1;lineage4.3.4.2 | None | SRR10040322 | MDR-TB | lineage2.2.1 | None | SRR29093665 | MDR-TB | lineage3 | None | SRR22175211 | HR-TB | lineage4.8 | None | ERR551605 | MDR-TB | lineage2.2.1 | None | ERR13275911 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539722 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539158 | MDR-TB | lineage2.2.1 | None | SRR18002901 | MDR-TB | lineage2.2.1 | None | ERR4872141 | MDR-TB | lineage4.1.1.1 | None | SRR1173245 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | SRR20969817 | MDR-TB | lineage2.2.1 | None | SRR847798 | MDR-TB | lineage4.1.2.1 | za | ERR2307525 | MDR-TB | lineage2.2.1 | None | ERR13266822 | Pre-XDR-TB | lineage3.1.2 | None | ERR13266901 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11081138 | MDR-TB | lineage4.8 | None | SRR1173415 | MDR-TB | lineage2.2.1.1;lineage4.6.1 | None | ERR13266732 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29017156 | MDR-TB | lineage3 | None | ERR13266561 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13258419 | MDR-TB | lineage2.2.1.1 | None | SRR10040140 | MDR-TB | lineage2.2.1 | None | SRR24256279 | MDR-TB | lineage2.2.1 | None | ERR13284150 | MDR-TB | lineage2.2.1 | None | ERR4813596 | MDR-TB | lineage4.3.4.2 | None | SRR25827862 | Pre-XDR-TB | lineage1.1.2;lineage2.2.1.1 | None | ERR13290580 | MDR-TB | lineage4.2.2.2 | None | ERR13290579 | MDR-TB | lineage4.2.2.2 | None | SRR29538943 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539769 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887770 | Pre-XDR-TB | lineage2.2.1 | None | ERR10762432 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261995 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4132458 | Pre-XDR-TB | lineage2.2.1 | None | SRR3743499 | Pre-XDR-TB | lineage2.2.1 | None | ERR13267055 | MDR-TB | lineage2.2.1.1 | None | ERR13261068 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13276159 | MDR-TB | lineage2.2.1 | None | SRR23861775 | MDR-TB | lineage2.2.1 | None | SRR12420487 | MDR-TB | lineage2.2.1 | None | SRR29772455 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29093796 | MDR-TB | lineage3 | None | ERR2510316 | MDR-TB | lineage1.1.2 | pk | ERR13276165 | XDR-TB | lineage2.2.1 | None | SRR6257034 | Pre-XDR-TB | lineage2.2.1 | None | ERR4796949 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29539037 | Pre-XDR-TB | lineage4.2.1.1 | None | SAMN01925685 | MDR-TB | lineage4.1.2.1 | None | ERR4796629 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4797083 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798514 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4798745 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4800153 | Pre-XDR-TB | lineage3 | None | ERR4827786 | MDR-TB | lineage4.7 | None | SRR29539055 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800427 | MDR-TB | lineage2.2.1.1 | in | ERR4799465 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13284047 | MDR-TB | lineage2.2.1 | None | ERR4799709 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799810 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR29230927 | HR-TB | lineage3 | None | ERR4797695 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13289707 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4799127 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR6045141 | MDR-TB | lineage3 | gb | ERR4831107 | Pre-XDR-TB | lineage2.2.1 | de | SRR13232480 | Pre-XDR-TB | lineage2.2.1 | None | SRR13232759 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR4799950 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR13261368 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR6797811 | MDR-TB | lineage1.2.2.2 | None | ERR4800380 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR13232417 | MDR-TB | lineage2.2.1 | None | SRR1166316 | MDR-TB | lineage4.1.2.1 | ro | ERR4828095 | MDR-TB | lineage2.2.1 | None | SRR8651585 | MDR-TB | lineage4.4.2 | cn | SRR13232708 | Pre-XDR-TB | lineage2.2.1 | None | ERR3287580 | Pre-XDR-TB | lineage4.3.4.2 | None | SRR28706445 | MDR-TB | lineage2.2.1 | None | ERR3287502 | MDR-TB | lineage4.3.4.2 | None | SRR28046121 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR28044334 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR28351293 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25389454 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4831483 | Pre-XDR-TB | lineage3 | None | ERR8665891 | Pre-XDR-TB | lineage2.2.1 | None | ERR2653124 | Pre-XDR-TB | lineage4.1.1.1 | None | ERR3273214 | MDR-TB | lineage4.1.2.1 | None | ERR8665862 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR2024974 | MDR-TB | lineage2.2.1 | cn | ERR7911487 | MDR-TB | lineage2.2.1 | vn | ERR4830572 | MDR-TB | lineage2.2.1 | tm | ERR4812875 | MDR-TB | lineage4.3.4.2 | None | ERR7911412 | MDR-TB | lineage2.2.1 | us | ERR4813336 | MDR-TB | lineage4.1.1.3 | None | ERR4813349 | MDR-TB | lineage4.3.4.2 | pe | ERR4831008 | Pre-XDR-TB | lineage2.2.1.2 | np | ERR502892 | MDR-TB | lineage2.2.1 | None | ERR4829094 | Pre-XDR-TB | lineage3.1.1 | dj | ERR751572 | MDR-TB | lineage4.3.4.2 | pe | ERR11043227 | MDR-TB | lineage2.2.1 | None | ERR11068182 | MDR-TB | lineage2.2.1 | None | SRR5709893 | MDR-TB | lineage2.2.1 | th | SRR5709901 | MDR-TB | lineage2.2.1 | th | SRR17856673 | Pre-XDR-TB | lineage4.1.2.1 | None | ERR11050202 | Pre-XDR-TB | lineage1.2.1.2.1 | None | ERR13262171 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR29538990 | Pre-XDR-TB | lineage2.2.1 | None | SRR29539796 | Pre-XDR-TB | lineage2.2.1 | None | SRR17406765 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR21277285 | Pre-XDR-TB | lineage2.2.1 | None | ERR017784 | Pre-XDR-TB | lineage2.2.1 | gb | SRR8434639 | MDR-TB | lineage2.2.1 | None | ERR13292509 | Pre-XDR-TB | lineage2.2.2 | None | ERR9992760 | XDR-TB | lineage2.2.2 | None | SRR24710090 | MDR-TB | lineage2.2.1 | None | ERR7737801 | MDR-TB | lineage3 | None | ERR2677439 | Pre-XDR-TB | lineage2.2.1 | de | SRR25389455 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR18715060 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276933 | Pre-XDR-TB | lineage2.2.1 | None | SRR7517819 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424942 | Pre-XDR-TB | lineage2.2.1 | None | SRR22175200 | XDR-TB | lineage2.2.1.1 | None | ERR4822334 | XDR-TB | lineage2.2.1 | None | SRR24709903 | MDR-TB | lineage2.2.1 | None | ERR7162983 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR1163201 | MDR-TB | lineage4.2.2.2 | None | SRR1049975 | MDR-TB | lineage4.1.3 | None | ERR4796816 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR5866387 | MDR-TB | lineage2.2.1 | None | ERR4798968 | Pre-XDR-TB | lineage2.2.1.1 | in | ERR4799267 | XDR-TB | lineage2.2.1.1 | in | ERR4800455 | MDR-TB | lineage2.2.1.1 | in | ERR2510882 | Pre-XDR-TB | lineage4.2.1.1 | it | SRR18715043 | MDR-TB | lineage2.2.1 | None | SRR6832850 | MDR-TB | lineage2.2.1 | None | ERR4831167 | XDR-TB | lineage2.2.1 | de | SRR24255931 | XDR-TB | lineage2.2.1 | None | ERR3287415 | MDR-TB | lineage4.1.1.3 | pe | ERR2653056 | Pre-XDR-TB | lineage4.1.1.1 | None | SRR13282527 | Pre-XDR-TB | lineage2.2.1 | None | SRR25827309 | MDR-TB | lineage2.2.1.1 | None | ERR4553814 | HR-TB | lineage1.2.2.2 | None | ERR11082910 | MDR-TB | lineage3 | None | SRR6339655 | HR-TB | lineage2.2.1 | None | ERR4822335 | XDR-TB | lineage2.2.1 | None | ERR4553755 | MDR-TB | None | SRR28394093 | MDR-TB | lineage4.3.4.2 | None | SRR28394190 | MDR-TB | lineage4 | None | ERR13261985 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR998846 | MDR-TB | lineage4.1.3 | None | SRR21732180 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866481 | MDR-TB | lineage2.2.1 | None | ERR13266414 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4799552 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29539300 | Pre-XDR-TB | lineage2.2.1 | None | ERR551634 | RR-TB | lineage4.8 | None | ERR6397212 | MDR-TB | lineage3 | None | ERR7737792 | MDR-TB | lineage3 | None | ERR7737630 | MDR-TB | lineage3 | None | ERR13261143 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR18715059 | Pre-XDR-TB | lineage2.2.1 | None | SRR25206945 | MDR-TB | lineage2.2.1 | None | SRR8758891 | MDR-TB | lineage2.2.1 | None | SRR924237 | MDR-TB | lineage4.1.2.1 | None | SRR25827537 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13276350 | MDR-TB | lineage2.2.1 | None | ERR13284943 | MDR-TB | lineage4.8 | None | SRR23310825 | HR-TB | lineage2.2.1 | None | SRR28046347 | Pre-XDR-TB | lineage3 | None | SRR28467059 | Pre-XDR-TB | lineage2.2.2 | None | ERR13262112 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266853 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR8774247 | Pre-XDR-TB | lineage2.2.2 | None | ERR13261197 | HR-TB | lineage2.2.1.1 | None | SRR12420648 | MDR-TB | lineage2.2.1 | None | ERR13262073 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13284109 | MDR-TB | lineage3 | None | ERR405221 | MDR-TB | lineage2.2.1.1 | None | SRR7517689 | Pre-XDR-TB | lineage2.2.1 | None | ERR270649 | MDR-TB | lineage4.1.1.3 | None | ERR4796326 | Pre-XDR-TB | lineage2.2.1.1 | in | SRR28044689 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR4799901 | MDR-TB | lineage2.2.1.1 | in | SRR8651562 | Pre-XDR-TB | lineage2.2.1 | cn | ERR4829823 | Pre-XDR-TB | lineage2.2.1 | it | SRR16149142 | Pre-XDR-TB | lineage4.2.2.1 | None | SRR5485606 | RR-TB | lineage4.9 | None | ERR9806710 | Pre-XDR-TB | lineage4.3.2.1 | None | ERR4553565 | MDR-TB | None | SRR1181132 | Pre-XDR-TB | lineage2.2.1 | None | ERR7975668 | MDR-TB | lineage2.2.1 | None | ERR13266526 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR23339961 | MDR-TB | lineage2.2.1 | None | ERR6397188 | MDR-TB | lineage3 | None | SRR29017387 | MDR-TB | lineage3 | None | ERR13261987 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR12420362 | Pre-XDR-TB | lineage2.2.1 | None | SRR24709928 | MDR-TB | lineage2.2.1 | None | ERR8665694 | XDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR13261256 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29539202 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800620 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13261214 | XDR-TB | lineage2.2.1.1 | None | ERR6879044 | MDR-TB | lineage4.1.2.1 | None | ERR13266098 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR7068935 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13266519 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13262120 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR25207196 | MDR-TB | lineage2.2.1 | None | ERR4800621 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR13262092 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29081666 | MDR-TB | lineage4.8 | None | ERR11043953 | MDR-TB | lineage2.2.1 | None | SRR24710034 | MDR-TB | lineage2.2.1 | None | SRR14801304 | MDR-TB | lineage2.2.1 | None | SRR25827794 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11081354 | MDR-TB | lineage2.2.1 | None | ERR13266114 | XDR-TB | lineage2.2.1.1 | None | SRR29772421 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR11082479 | MDR-TB | lineage2.2.1 | None | DRR130054 | MDR-TB | lineage2.2.1.1 | None | ERR1654699 | MDR-TB | lineage4.6.1.2 | None | ERR5866125 | Pre-XDR-TB | lineage2.2.1 | None | SRR28239859 | HR-TB | lineage2.2.1 | None | ERR13106398 | MDR-TB | lineage3 | None | ERR13284506 | MDR-TB | lineage2.2.1 | None | ERR13290057 | MDR-TB | lineage3 | None | ERR13266728 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR24256378 | MDR-TB | lineage2.2.1 | None | SRR24255882 | Pre-XDR-TB | lineage2.2.1 | None | ERR13261382 | Pre-XDR-TB | lineage2.2.1.1 | None | ERR2307542 | MDR-TB | lineage2.2.1 | None | ERR13261103 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR23861879 | Pre-XDR-TB | lineage2.2.1 | None | SRR23938624 | MDR-TB | lineage2.2.1 | None | SRR7645866 | Pre-XDR-TB | lineage4.2.1 | None | ERR13276166 | MDR-TB | lineage2.2.1 | None | SRR1165432 | MDR-TB | lineage4.2.2.2 | None | SRR13232469 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681249 | MDR-TB | lineage2.2.1 | None | ERR4423474 | Pre-XDR-TB | lineage2.2.2 | None | SRR29772795 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29539164 | MDR-TB | lineage2.2.1 | None | ERR13266821 | Pre-XDR-TB | lineage3.1.2 | None | ERR4796387 | Pre-XDR-TB | lineage2.2.1 | None | SRR6458395 | Pre-XDR-TB | lineage2.2.1 | None |
|---|
