ERR7911131
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR7911487
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR7911412
|
MDR-TB
|
lineage2.2.1
|
us
|
SRR847798
|
MDR-TB
|
lineage4.1.2.1
|
za
|
SAMN02414962
|
MDR-TB
|
lineage4.2.2.2
|
se
|
SRR2024957
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR2099949
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR2024974
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR23310825
|
MDR-TB
|
lineage2.2
|
None
|
ERR2653056
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR2653124
|
Pre-XDR-TB
|
lineage4.1.1
|
None
|
ERR270649
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR2707183
|
MDR-TB
|
lineage4.6.1.2
|
cd
|
SRR1166316
|
MDR-TB
|
lineage4.1.2.1
|
ro
|
SAMEA2534084
|
RR-TB
|
lineage4.8
|
uz
|
ERR067630
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR23339961
|
MDR-TB
|
lineage2.2
|
None
|
ERR144619
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR067643
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR229984
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR067761
|
Pre-XDR-TB
|
lineage2.2.1
|
ru
|
ERR229931
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR228042
|
MDR-TB
|
lineage4;lineage2.2.1
|
ru
|
ERR4827423
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4822334
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4827786
|
MDR-TB
|
lineage4.7
|
None
|
ERR4827821
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR2677439
|
Pre-XDR-TB
|
lineage2.2.1
|
de
|
ERR4822335
|
XDR-TB
|
lineage2.2.1
|
None
|
SAMN02628506
|
MDR-TB
|
lineage3
|
ir
|
ERR4798046
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798968
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR2516961
|
MDR-TB
|
lineage4.1.1.3
|
gb
|
ERR4831167
|
XDR-TB
|
lineage2.2.1
|
de
|
ERR4831107
|
Pre-XDR-TB
|
lineage2.2.1
|
de
|
ERR4799008
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR2517122
|
Pre-XDR-TB
|
lineage2.2.1.1
|
gb
|
ERR4798779
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4797511
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798860
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799173
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796469
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR2516607
|
MDR-TB
|
lineage4.1.2.1
|
nl
|
ERR4799196
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798921
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796374
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796502
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR3256270
|
Pre-XDR-TB
|
lineage1.2.1.2.1
|
ph
|
ERR4796586
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4828095
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4796573
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799829
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796597
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799810
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796566
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796326
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR3335761
|
Pre-XDR-TB
|
lineage3.1.3
|
pk
|
ERR4798334
|
MDR-TB
|
lineage4.8
|
in
|
ERR4796949
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798146
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796629
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796955
|
MDR-TB
|
lineage2.2.1
|
in
|
ERR4799267
|
XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798514
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4797034
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4796816
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799901
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798481
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799137
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR6458395
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6339655
|
HR-TB
|
lineage2.2.1
|
None
|
SRR6458387
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6458419
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4798508
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR8651562
|
Pre-XDR-TB
|
lineage2.2.1
|
cn
|
ERR4797083
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR8651585
|
MDR-TB
|
lineage4.4.2
|
cn
|
SRR6485041
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
ERR4796989
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798574
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799375
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798593
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799571
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4811487
|
MDR-TB
|
lineage2.2.1
|
cn
|
ERR4798682
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
SRR6257034
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800380
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799698
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799709
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799950
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800476
|
XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4816247
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR2510882
|
Pre-XDR-TB
|
lineage4.2.1.1
|
it
|
ERR4800004
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4797478
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4797378
|
XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798610
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798736
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4830580
|
MDR-TB
|
lineage2.2.1
|
tm
|
ERR4798745
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4797542
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4797531
|
Pre-XDR-TB
|
lineage3.1.2
|
in
|
ERR4830572
|
MDR-TB
|
lineage2.2.1
|
tm
|
ERR4830956
|
Pre-XDR-TB
|
lineage2.2.1.1
|
np
|
ERR4800427
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4831008
|
Pre-XDR-TB
|
lineage2.2.1.2
|
np
|
ERR4831024
|
Pre-XDR-TB
|
lineage2.2.1.1
|
np
|
ERR4799127
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4798783
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800433
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4797695
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4830926
|
Pre-XDR-TB
|
lineage2.2.1
|
np
|
ERR4799447
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799465
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799907
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4799665
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800455
|
MDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800483
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4829924
|
HR-TB
|
lineage4.3.3
|
it
|
ERR4800562
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800515
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800514
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4813349
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4800569
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4800395
|
Pre-XDR-TB
|
lineage2.2.1.1
|
in
|
ERR4811777
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4872141
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR4813417
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
ERR3287767
|
MDR-TB
|
lineage4.3.4.2
|
pe
|
SRR6831967
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6807712
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR6807756
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813174
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR6832565
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR6832850
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR4813156
|
Pre-XDR-TB
|
lineage4.3.4.2
|
pe
|
ERR4812375
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813199
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4829094
|
Pre-XDR-TB
|
lineage3.1.1
|
dj
|
ERR3287415
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR3287858
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR2510316
|
MDR-TB
|
lineage1.1.2
|
pk
|
ERR2510438
|
MDR-TB
|
lineage3
|
pk
|
ERR2510295
|
Pre-XDR-TB
|
lineage3
|
pk
|
ERR2510726
|
MDR-TB
|
lineage4.8
|
it
|
ERR4829823
|
Pre-XDR-TB
|
lineage2.2.1
|
it
|
SRR7517819
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11067557
|
HR-TB
|
lineage2.2.1
|
None
|
SRR7517689
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR998600
|
HR-TB
|
lineage6.3.1;lineage4.1
|
None
|
SRR998807
|
MDR-TB
|
lineage4.6.2.2;lineage4.1
|
None
|
SRR8434639
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR924237
|
MDR-TB
|
lineage4.1.2.1
|
None
|
SRR8186769
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR8186768
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR998846
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR7645866
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR7755680
|
Pre-XDR-TB
|
lineage4.2.1
|
None
|
SRR998845
|
MDR-TB
|
lineage4.1
|
None
|
SRR998848
|
MDR-TB
|
lineage4.1.3
|
None
|
ERR019858
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR998847
|
MDR-TB
|
lineage4.1.3
|
None
|
DRR130055
|
MDR-TB
|
lineage2.2.1.1
|
None
|
DRR130054
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR11043922
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR10225495
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR10748549
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR10762432
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR11043227
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043793
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10680183
|
MDR-TB
|
lineage4.9
|
None
|
ERR3639818
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR3273214
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR2513770
|
Pre-XDR-TB
|
lineage2.2.1.1
|
gb
|
ERR2513852
|
Pre-XDR-TB
|
lineage2.2.1.1
|
gb
|
ERR3287502
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR3287501
|
MDR-TB
|
lineage4.3.4.2;lineage4.1.1.1
|
None
|
ERR3287580
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
ERR3639731
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043953
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11043952
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR4423474
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR403303
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR405221
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR4132458
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4553540
|
MDR-TB
|
|
None
|
ERR4553429
|
Pre-XDR-TB
|
|
None
|
ERR4553565
|
MDR-TB
|
|
None
|
ERR4797474
|
Other
|
|
None
|
ERR4553559
|
MDR-TB
|
|
None
|
ERR4553755
|
MDR-TB
|
|
None
|
ERR4553814
|
MDR-TB
|
|
None
|
ERR4831984
|
MDR-TB
|
lineage2.2.1
|
vn
|
ERR2515997
|
MDR-TB
|
lineage4.4.1.1.1
|
za
|
ERR8975732
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR8975498
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR5918009
|
Pre-XDR-TB
|
lineage2.2.2
|
za
|
ERR4799180
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR5866125
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4800097
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4831483
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4800620
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR12117986
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR8665828
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665862
|
Pre-XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR16088406
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR4808976
|
MDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4799546
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR4799552
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR4800153
|
Pre-XDR-TB
|
lineage3
|
None
|
ERR4800621
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR4800634
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR8975724
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4831602
|
MDR-TB
|
lineage2.1
|
vn
|
ERR8665891
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR16088562
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866127
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866126
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR5866385
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866386
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866387
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866481
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR5866482
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7737630
|
MDR-TB
|
lineage3
|
None
|
ERR5987260
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR5987405
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR6358858
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358863
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6358871
|
MDR-TB
|
lineage4.6.1.2
|
None
|
ERR6397188
|
MDR-TB
|
lineage3
|
None
|
ERR6397212
|
MDR-TB
|
lineage3
|
None
|
ERR6879044
|
MDR-TB
|
lineage4.1.2.1
|
None
|
ERR7162978
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR7162983
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR7737625
|
MDR-TB
|
lineage3
|
None
|
SRR16088057
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR7737801
|
MDR-TB
|
lineage3
|
None
|
ERR7737792
|
MDR-TB
|
lineage3
|
None
|
SRR24256376
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9120023
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
SRR24255882
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21732379
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR24256353
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24256378
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7975666
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665695
|
XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
ERR8665694
|
XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR22249746
|
HR-TB
|
lineage1.1.1
|
None
|
ERR8774247
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR9029875
|
MDR-TB
|
lineage4.3.4.2;lineage4.1.1.1
|
None
|
ERR9119545
|
MDR-TB
|
lineage4.1.1
|
None
|
ERR9120022
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR7975668
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR8665744
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8665745
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9125456
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR9992954
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR9992634
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR9992838
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR9992760
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR11050202
|
Pre-XDR-TB
|
lineage1.2.1.2.1
|
None
|
SRR1049975
|
MDR-TB
|
lineage4.1.3
|
None
|
SRR1173415
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR1163201
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1163208
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1165432
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1167131
|
MDR-TB
|
lineage4.2.2.2
|
None
|
SRR1173245
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR1173311
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11567805
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR11567806
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1158907
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1162531
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1173751
|
MDR-TB
|
lineage3
|
None
|
SRR1173572
|
MDR-TB
|
lineage3
|
None
|
SRR1173873
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR1173866
|
MDR-TB
|
lineage4.6.1;lineage2.2.1.1
|
None
|
SRR13232425
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232417
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181036
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181132
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR1181329
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR12416834
|
MDR-TB
|
lineage2.2.2
|
None
|
SRR12416845
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232400
|
MDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR13232469
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232439
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232480
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232559
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232708
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232740
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR13282527
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR13232759
|
XDR-TB
|
lineage4.3.3;lineage2.2.1
|
None
|
SRR13232781
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR14801304
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR14088377
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR15316421
|
MDR-TB
|
lineage4.2.2
|
None
|
SRR15368788
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15316590
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR15600382
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR16058722
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR16156861
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16149142
|
Pre-XDR-TB
|
lineage4.2.2.1
|
None
|
SRR16370526
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1657070
|
Other
|
La1.8.1
|
None
|
SRR17163499
|
MDR-TB
|
lineage3.1.1
|
None
|
SRR18002901
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR17406765
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR17856673
|
Pre-XDR-TB
|
lineage4.1.2.1
|
None
|
SRR18714911
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24256078
|
MDR-TB
|
lineage4.2.1.1
|
None
|
SRR18715043
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715059
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR18715071
|
Pre-XDR-TB
|
lineage4.2.1.1
|
None
|
SRR18715060
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969660
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR18715274
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR20969817
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710111
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR20969897
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25389453
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR24828601
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25827868
|
Pre-XDR-TB
|
lineage3.1.2;lineage2.2.1
|
None
|
SRR25827862
|
Pre-XDR-TB
|
lineage2.2.1.1;lineage1.1.2
|
None
|
SRR25827644
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827309
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR21277285
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21276933
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21576672
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21277286
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21277857
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR21677856
|
Other
|
lineage4.8
|
None
|
ERR11068182
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR22175176
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR22175179
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR22175207
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR22175210
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR22175211
|
MDR-TB
|
lineage4.8
|
None
|
SRR22351865
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22424942
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR22175201
|
XDR-TB
|
lineage2.2.1.1
|
None
|
SRR22175200
|
XDR-TB
|
lineage2.2.1.1
|
None
|
ERR11068581
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR11080964
|
MDR-TB
|
lineage4.8
|
None
|
ERR11082479
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081138
|
MDR-TB
|
lineage4.8
|
None
|
ERR11081354
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR11081528
|
MDR-TB
|
lineage4.2.2.2
|
None
|
ERR11082910
|
MDR-TB
|
lineage3
|
None
|
SRR23938624
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23861775
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR23861879
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24828609
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9806710
|
Pre-XDR-TB
|
lineage4.3.2.1
|
None
|
ERR10610248
|
Pre-XDR-TB
|
lineage4.3.2.1
|
None
|
SRR21887741
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR21887770
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR6797811
|
MDR-TB
|
lineage1.2.2.2
|
None
|
SRR21732180
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24256012
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24255931
|
XDR-TB
|
lineage2.2.1
|
None
|
SRR24256036
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24710162
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24256259
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR24709938
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710042
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24256108
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR25389454
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR22251490
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24709928
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR26331613
|
Pre-XDR-TB
|
lineage1.2.2.2
|
None
|
SRR24709903
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710034
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710090
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710250
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25207196
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR24710238
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25389455
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR6045141
|
MDR-TB
|
lineage3
|
gb
|
SRR25827443
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR25827794
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR24256279
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827498
|
Pre-XDR-TB
|
lineage4.8;lineage2.2.1.1
|
None
|
SRR25827311
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR25206945
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR25827537
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR6044837
|
Pre-XDR-TB
|
lineage2.2.1.1
|
gb
|
SRR5709901
|
MDR-TB
|
lineage2.2.1
|
th
|
ERR4812875
|
MDR-TB
|
lineage4.3.4.2
|
None
|
SRR5709893
|
MDR-TB
|
lineage2.2.1
|
th
|
ERR4813011
|
Pre-XDR-TB
|
lineage4.3.4.2
|
None
|
SRR5485606
|
RR-TB
|
|
None
|
ERR4813596
|
MDR-TB
|
lineage4.3.4.2
|
None
|
ERR4813336
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR3743499
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR1034788
|
MDR-TB
|
lineage4.1.2.1
|
pe
|
ERR1035090
|
MDR-TB
|
lineage2.2.1
|
vn
|
SAMN02419583
|
Pre-XDR-TB
|
lineage2.2.1
|
by
|
ERR038743
|
RR-TB
|
lineage3
|
ug
|
SRR6257021
|
MDR-TB
|
lineage2.2.1
|
ru
|
SRR1723520
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR2510593
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR067621
|
MDR-TB
|
lineage2.2.1
|
ru
|
ERR017784
|
Pre-XDR-TB
|
lineage2.2.1
|
gb
|
ERR502892
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR751572
|
MDR-TB
|
lineage4.3.4.2
|
pe
|