ERR11082441
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
SRR786373
|
Pre-XDR-TB
|
lineage3
|
None
|
SRR29096872
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR16156805
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
SRR10869239
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911585
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR7911590
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR7911636
|
Pre-XDR-TB
|
lineage2.2.2;lineage4.1.1.3
|
za
|
SRR29096311
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4011976
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29231338
|
Pre-XDR-TB
|
lineage4.1.1.3;lineage4.1.2
|
None
|
ERR7911637
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1873441
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR10869197
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748353
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992839
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869203
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025664
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993083
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR2503407
|
MDR-TB
|
lineage1.2.1.2.1
|
fi
|
SRR16156859
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9807012
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR16156747
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1873546
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR6824496
|
MDR-TB
|
lineage2.2.1
|
cn
|
SRR29093245
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806944
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR13288959
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093427
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR6362393
|
MDR-TB
|
lineage4.1.1.3
|
None
|
DRR130053
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29056112
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR1873462
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR9992751
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993088
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748424
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR11081797
|
MDR-TB
|
lineage4.8
|
None
|
ERR9806952
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29055798
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR1873554
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR9806971
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992998
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR24710260
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR16156846
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR24710050
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR9993065
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093191
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR5918039
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR28351263
|
Pre-XDR-TB
|
lineage4.8
|
None
|
ERR7911593
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1873400
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806910
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9807014
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29096406
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29096562
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748491
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR5341356
|
MDR-TB
|
lineage3
|
in
|
SRR29093720
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4808876
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR9807002
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025435
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR1873418
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR4831561
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29772413
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR10112887
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR5987241
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR10748150
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748485
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911596
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR8975014
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9120110
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR5918040
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR29093345
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29096345
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993229
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29273869
|
RR-TB
|
lineage4.1.2
|
None
|
ERR10748315
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR2515475
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1873448
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR16156719
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29056327
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806880
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992746
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR16156716
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993219
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869213
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR24255956
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29055939
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29056305
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093458
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR23938671
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR13232624
|
XDR-TB
|
lineage2.2.1
|
None
|
ERR9806876
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9119700
|
MDR-TB
|
lineage2.2.1.1
|
None
|
SRR10869158
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4797458
|
XDR-TB
|
lineage3
|
in
|
ERR1035061
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR10748165
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806925
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806939
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025490
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR1034647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9992753
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093248
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29539041
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
SRR29093183
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9029384
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9807010
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR10112861
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025628
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748144
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29055524
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025698
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9120109
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806973
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR25827848
|
Pre-XDR-TB
|
lineage2.2.1;lineage3
|
None
|
ERR8025592
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806899
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR16156755
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025692
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911663
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
SRR29096852
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29096577
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29289141
|
MDR-TB
|
lineage1.1.2
|
None
|
ERR9992833
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869252
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR16156687
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093749
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869161
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869214
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093339
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093310
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993218
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR24709878
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9806966
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4828010
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR9993216
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29055594
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR5818602
|
MDR-TB
|
lineage3
|
dj
|
ERR1873391
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR8758896
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4831528
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4831558
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869227
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806869
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025711
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025573
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911704
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR13258512
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR8025703
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29056301
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR2515568
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR5987307
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR16156730
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911601
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1873446
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR2515133
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR7911628
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR9993230
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR5987400
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR9806953
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR5341357
|
MDR-TB
|
lineage1.1.2
|
in
|
ERR7362011
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806866
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9807004
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7361986
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR11081858
|
MDR-TB
|
lineage4.8
|
None
|
ERR10748320
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993009
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8975785
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR6362206
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1034990
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR2515546
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR7911677
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR4423566
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869234
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9119693
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025662
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR24710031
|
Pre-XDR-TB
|
lineage2.2.1
|
None
|
ERR13284099
|
MDR-TB
|
lineage2.2.1;lineage4.3.3
|
None
|
SRR10869284
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9119892
|
MDR-TB
|
lineage2.2.1.1
|
None
|
ERR7911675
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1873540
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1035037
|
MDR-TB
|
lineage4.1.1.3
|
za
|
ERR10748448
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806931
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806962
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR11082129
|
MDR-TB
|
lineage4.8
|
None
|
ERR8025508
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093974
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR13285052
|
MDR-TB
|
lineage4.8
|
None
|
ERR13285251
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28045953
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13288741
|
Pre-XDR-TB
|
lineage2.2.1.1
|
None
|
ERR9993208
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR25206902
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR13286205
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR13289008
|
Pre-XDR-TB
|
lineage2.2.2;lineage4.1.1.3
|
None
|
SRR24256009
|
Pre-XDR-TB
|
lineage4.3.3
|
None
|
SRR29093214
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29056277
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093268
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911597
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR9806897
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR24710058
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR29273723
|
RR-TB
|
lineage4.1.2
|
None
|
ERR8025541
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR8025744
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9807000
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093572
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR10869164
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806988
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR25827850
|
XDR-TB
|
lineage2.2.1.1;lineage3
|
None
|
ERR13289331
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9119744
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806997
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29056326
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR10748381
|
MDR-TB
|
lineage3;lineage4.1.1.3
|
None
|
ERR9992974
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR16157097
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911684
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR1034641
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993264
|
XDR-TB
|
lineage4.1.1.3
|
None
|
ERR1873550
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR4831557
|
Pre-XDR-TB
|
lineage4.1.1.3;lineage4.3.2.1
|
None
|
SRR10869134
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4423565
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9806888
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR9993105
|
XDR-TB
|
lineage4.1.1.3
|
None
|
SRR23938663
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR7911610
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR5918023
|
Pre-XDR-TB
|
lineage4.1.1.3
|
za
|
ERR9806985
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR29093456
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR16156756
|
MDR-TB
|
lineage4.1.1.3
|
None
|