Rv2416c - c.-10G>C
Drug resistance types
0 Sensitive
3 RR-TB
0 HR-TB
84 MDR-TB
148 Pre-XDR-TB
5 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 176 |
| lineage4.2.1.1 | 3 |
| lineage4.8 | 6 |
| lineage4.1.1.3 | 4 |
| lineage2.2.1;lineage3 | 2 |
| lineage4.5 | 16 |
| lineage4.3.3 | 7 |
| lineage1.2.1.2 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.2.1 | 3 |
| lineage2.2.1;lineage4.1.2.1 | 1 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage2.2.1;lineage4.8 | 3 |
| lineage4.9 | 1 |
| lineage4.3.4.2 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.2.2.2 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1;lineage3;lineage4.9 | 1 |
| lineage1.2.2.2 | 2 |
| lineage3 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage2.2.2 | 1 |
| lineage4.4.2 | 1 |
| lineage2.2.1.1 | 1 |
| lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 240 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR28045254 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29539684 | MDR-TB | lineage2.2.1 | None |
| ERR13284443 | MDR-TB | lineage4.2.1.1 | None |
| SRR10525337 | MDR-TB | lineage4.8 | None |
| SRR25515560 | MDR-TB | lineage2.2.1 | None |
| ERR4797070 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR7911072 | MDR-TB | lineage2.2.1 | za |
| ERR7911610 | Pre-XDR-TB | lineage4.1.1.3 | za |
| SRR28046124 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4797160 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR25827827 | Pre-XDR-TB | lineage2.2.1;lineage3 | None |
| SRR833216 | Pre-XDR-TB | lineage4.5 | None |
| SAMEA2533570 | MDR-TB | lineage2.2.1 | uz |
| ERR2516249 | MDR-TB | lineage2.2.1 | be |
| ERR4796973 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4798460 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4800337 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR11068857 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13290917 | Pre-XDR-TB | lineage4.5 | None |
| SRR29539783 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR5917991 | MDR-TB | lineage2.2.1 | za |
| ERR4797187 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4798394 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR13284517 | MDR-TB | lineage2.2.1 | None |
| ERR4799070 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4798695 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4796655 | MDR-TB | lineage2.2.1 | in |
| ERR4798259 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR16156222 | MDR-TB | lineage2.2.1 | None |
| SRR28351487 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR28394246 | MDR-TB | lineage4.3.3 | None |
| SRR924224 | Pre-XDR-TB | lineage4.3.3 | None |
| ERR8975852 | XDR-TB | lineage2.2.1 | None |
| ERR4799206 | XDR-TB | lineage2.2.1 | in |
| SRR16156797 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR10040214 | MDR-TB | lineage4.5 | None |
| ERR4799406 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR25827631 | Pre-XDR-TB | lineage2.2.1;lineage3 | None |
| ERR4796660 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR7362005 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR10748322 | MDR-TB | lineage2.2.1 | None |
| ERR13266997 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29539158 | MDR-TB | lineage2.2.1 | None |
| ERR13261486 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR18715308 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR21576687 | MDR-TB | lineage1.2.1.2 | None |
| ERR10748324 | MDR-TB | lineage2.2.1 | None |
| ERR4797556 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR13120446 | MDR-TB | lineage2.2.1 | None |
| SRR29093952 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR16156231 | MDR-TB | lineage2.2.1 | None |
| ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13291074 | Pre-XDR-TB | lineage4.5 | None |
| ERR13266448 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4872350 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13290848 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None |
| ERR13284379 | MDR-TB | lineage2.2.1 | None |
| SRR833219 | Pre-XDR-TB | lineage4.5 | None |
| SRR29093239 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR10869274 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR11082612 | MDR-TB | lineage4.2.1 | None |
| ERR13284068 | MDR-TB | lineage2.2.1 | None |
| ERR4796529 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR1019192 | Pre-XDR-TB | lineage4.5 | None |
| SRR30180260 | MDR-TB | lineage4.5 | None |
| ERR13261155 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR25827368 | XDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
| ERR11082833 | RR-TB | lineage2.2.1 | None |
| ERR4797632 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR13290946 | MDR-TB | lineage4.5 | None |
| SRR29093442 | MDR-TB | lineage2.2.1 | None |
| SRR29539782 | MDR-TB | lineage2.2.1;lineage4.3.3 | None |
| SRR25827371 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None |
| SRR1011522 | Pre-XDR-TB | lineage4.5 | None |
| ERR13290988 | Pre-XDR-TB | lineage4.5 | None |
| ERR8975741 | RR-TB | lineage2.2.1 | None |
| ERR133843 | Pre-XDR-TB | lineage2.2.1 | ru |
| SRR29681225 | MDR-TB | lineage2.2.1 | None |
| ERR4797469 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4797617 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR29056090 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13266624 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR6865369 | MDR-TB | lineage4.1.1.3 | None |
| SRR29681424 | MDR-TB | lineage2.2.1 | None |
| SRR29539710 | MDR-TB | lineage2.2.1 | None |
| SRR29273943 | MDR-TB | lineage4.8 | None |
| ERR13284476 | MDR-TB | lineage2.2.1 | None |
| ERR4799040 | XDR-TB | lineage2.2.1 | in |
| DRR474002 | RR-TB | lineage4.9 | None |
| SRR7652996 | MDR-TB | lineage4.2.1 | None |
| SRR29539851 | Pre-XDR-TB | lineage4.3.4.2 | None |
| ERR4798825 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR8025477 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR28351502 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR28046321 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR24256041 | MDR-TB | lineage2.2.1 | None |
| ERR2516496 | MDR-TB | lineage4.3.3 | pe |
| SRR11786873 | MDR-TB | lineage2.2.1 | None |
| SRR16156737 | MDR-TB | lineage2.2.1 | None |
| SRR7592339 | Pre-XDR-TB | lineage4.8 | None |
| ERR11043052 | MDR-TB | lineage2.2.1;lineage4 | None |
| ERR8025699 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13266729 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29539584 | MDR-TB | lineage2.2.1 | None |
| SRR29093257 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29056077 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29056044 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR14801964 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4796440 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4796623 | MDR-TB | lineage2.2.1 | in |
| ERR4797172 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR552403 | MDR-TB | lineage2.2.1 | None |
| ERR551740 | MDR-TB | lineage2.2.1 | None |
| SRR16156803 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR18715489 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4872322 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4797620 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR16156242 | MDR-TB | lineage2.2.1 | None |
| SRR29093312 | MDR-TB | lineage2.2.1 | None |
| ERR11043470 | MDR-TB | lineage2.2.1 | None |
| ERR11044112 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR8025680 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR7653609 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR550928 | MDR-TB | lineage2.2.1 | None |
| SRR847775 | Pre-XDR-TB | lineage4.3.3 | za |
| ERR4799336 | Pre-XDR-TB | lineage4.2.2.2 | in |
| SRR29539038 | MDR-TB | lineage2.2.1 | None |
| ERR5865854 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR25827615 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR2516514 | Pre-XDR-TB | lineage4.1.2 | pe |
| ERR13284405 | MDR-TB | lineage4.2.1 | None |
| SRR25827394 | XDR-TB | lineage2.2.1;lineage3;lineage4.9 | None |
| ERR13284438 | MDR-TB | lineage2.2.1 | None |
| ERR13261980 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR11080875 | MDR-TB | lineage4.2.1.1 | None |
| ERR553020 | MDR-TB | lineage1.2.2.2 | None |
| ERR553021 | MDR-TB | lineage1.2.2.2 | sz |
| ERR13267008 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4800576 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR13291058 | Pre-XDR-TB | lineage4.5 | None |
| SRR29274205 | MDR-TB | lineage4.8 | None |
| SRR29056055 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR16088562 | MDR-TB | lineage2.2.1 | None |
| ERR4799163 | Pre-XDR-TB | lineage4.2.2.2 | in |
| ERR550929 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29055808 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4799578 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR13261096 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR8774357 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13261216 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR551339 | MDR-TB | lineage2.2.1 | None |
| SRR29681310 | MDR-TB | lineage2.2.1 | None |
| ERR4796905 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4796974 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4799165 | Pre-XDR-TB | lineage3 | in |
| SRR14802204 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR16156221 | MDR-TB | lineage2.2.1 | None |
| ERR13265094 | Pre-XDR-TB | lineage2.2.2 | None |
| SRR28393813 | Pre-XDR-TB | lineage4.8 | None |
| SRR28706388 | MDR-TB | lineage2.2.1 | None |
| SRR28394188 | MDR-TB | lineage4.3.3 | None |
| SRR24256032 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR23311039 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4796399 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR7362012 | MDR-TB | lineage2.2.1 | None |
| SRR10430361 | MDR-TB | lineage2.2.1 | None |
| SRR10869281 | Pre-XDR-TB | lineage2.2.1;lineage2.2.2 | None |
| ERR1873554 | Pre-XDR-TB | lineage4.1.1.3 | za |
| ERR8699107 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6831862 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29539585 | MDR-TB | lineage2.2.1 | None |
| ERR10748341 | MDR-TB | lineage2.2.1 | None |
| SRR16156783 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4798476 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR29681226 | MDR-TB | lineage2.2.1 | None |
| SRR25827529 | Pre-XDR-TB | lineage2.2.1;lineage4.8 | None |
| SRR28714180 | Pre-XDR-TB | lineage4.2.1.1 | None |
| ERR10748110 | MDR-TB | lineage2.2.1 | None |
| SRR10303284 | MDR-TB | lineage2.2.1 | None |
| ERR4797802 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4798839 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR24710169 | MDR-TB | lineage2.2.1 | None |
| SRR1011521 | Pre-XDR-TB | lineage4.5 | None |
| ERR4800428 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4796988 | Pre-XDR-TB | lineage2.2.1 | in |
| SAMN01925657 | Pre-XDR-TB | lineage4.3.3 | None |
| ERR9806992 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR10040452 | MDR-TB | lineage4.4.2 | None |
| ERR4799845 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR9807001 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13261248 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR10869098 | MDR-TB | lineage2.2.1 | None |
| SRR6485130 | MDR-TB | lineage2.2.1 | None |
| ERR4799765 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4799552 | Pre-XDR-TB | lineage2.2.1.1 | None |
| SRR29055826 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR5865853 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR6831722 | MDR-TB | lineage2.2.1 | None |
| ERR550928_ERR550929 | MDR-TB | lineage2.2.1 | None |
| ERR4798056 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4798191 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR13284693 | MDR-TB | lineage2.2.1;lineage4 | None |
| ERR4799303 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR29055592 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29681370 | MDR-TB | lineage2.2.1 | None |
| ERR4024838 | MDR-TB | lineage4.1.1.3 | None |
| ERR4796347 | Pre-XDR-TB | lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1 | in |
| ERR13290830 | Pre-XDR-TB | lineage4.5 | None |
| ERR13276379 | MDR-TB | lineage2.2.1 | None |
| ERR13266881 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR14807658 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4798928 | MDR-TB | lineage2.2.1 | in |
| ERR4797952 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR7975686 | MDR-TB | lineage4.3.3 | None |
| ERR4800062 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR10869174 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR13261208 | Pre-XDR-TB | lineage2.2.1 | None |
| SRR29096266 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR3794386 | MDR-TB | lineage2.2.1 | None |
| ERR13291087 | Pre-XDR-TB | lineage4.5 | None |
| ERR4798919 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR29273984 | MDR-TB | lineage4.8 | None |
| SRR28351464 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4798667 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR29539370 | MDR-TB | lineage2.2.1;lineage4.8 | None |
| ERR13290971 | MDR-TB | lineage4.5 | None |
| ERR552437 | MDR-TB | lineage2.2.1 | None |
| ERR4799890 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4797492 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR23310910 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR10748521 | MDR-TB | lineage2.2.1 | None |
| ERR13288802 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4863406 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4796646 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4798972 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR13276199 | Pre-XDR-TB | lineage2.2.1 | None |
| ERR4797550 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4798232 | Pre-XDR-TB | lineage2.2.1 | in |
| ERR4799521 | Pre-XDR-TB | lineage2.2.1 | in |
| SRR1011518 | Pre-XDR-TB | lineage4.5 | None |
