Rv2416c - c.-10G>C


Drug resistance types
0 Sensitive 3 RR-TB 2 HR-TB 40 MDR-TB 102 Pre-XDR-TB 3 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1 113
lineage4.9 1
lineage4.3.3 4
lineage4.5 6
lineage4.8 2
lineage4.2.1 2
lineage4;lineage2.2.1 1
lineage4.1.1.3 4
lineage2.2.1.1 1
lineage2.2.2;lineage2.2.1 1
lineage4.8;lineage2.2.1 2
lineage1.2.1.2 1
lineage4.2.1.1 1
lineage4.1.2.1;lineage2.2.1 1
lineage1.2.2.2 1
lineage4.9;lineage3;lineage2.2.1 1
lineage3;lineage2.2.1 1
lineage2.2 2
lineage4.1.2 1
lineage3.1.2.1;lineage2.2.1;lineage1.2.2.2 1
lineage4.2.2.2 2
lineage3 1
spoligotype Counts
spoligotype Count
None 150
Geographic prevalence
Country level data for this variant is available for 66 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4863406 Pre-XDR-TB lineage2.2.1 None
DRR474002 RR-TB lineage4.9 None
ERR4872322 Pre-XDR-TB lineage2.2.1 None
ERR4872350 Pre-XDR-TB lineage2.2.1 None
SRR6831862 Pre-XDR-TB lineage2.2.1 None
ERR11044112 Pre-XDR-TB lineage2.2.1 None
SRR6831722 MDR-TB lineage2.2.1 None
SRR924224 Pre-XDR-TB lineage4.3.3 None
SRR833216 Pre-XDR-TB lineage4.5 None
SRR833219 Pre-XDR-TB lineage4.5 None
SRR7592339 Pre-XDR-TB lineage4.8 None
SRR7652996 MDR-TB lineage4.2.1 None
SRR7653609 Pre-XDR-TB lineage2.2.1 None
ERR10748110 MDR-TB lineage2.2.1 None
ERR10748322 MDR-TB lineage2.2.1 None
ERR10748324 MDR-TB lineage2.2.1 None
ERR10748341 MDR-TB lineage2.2.1 None
ERR10748521 MDR-TB lineage2.2.1 None
ERR11043052 MDR-TB lineage4;lineage2.2.1 None
ERR11043470 MDR-TB lineage2.2.1 None
ERR3794386 MDR-TB lineage2.2.1 None
SRR10303284 MDR-TB lineage2.2.1 None
ERR4024838 MDR-TB lineage4.1.1.3 None
ERR5917991 MDR-TB lineage2.2.1 za
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799552 Pre-XDR-TB lineage2.2.1.1 None
ERR8975741 RR-TB lineage2.2.1 None
ERR5865853 Pre-XDR-TB lineage2.2.1 None
ERR5865854 Pre-XDR-TB lineage2.2.1 None
ERR7362005 Pre-XDR-TB lineage2.2.1 None
ERR7975686 MDR-TB lineage4.3.3 None
ERR8774357 Pre-XDR-TB lineage2.2.1 None
SRR1011521 Pre-XDR-TB lineage4.5 None
SRR1019192 Pre-XDR-TB lineage4.5 None
ERR4798839 Pre-XDR-TB lineage2.2.1 None
ERR8975852 Pre-XDR-TB lineage2.2.1 None
SRR16088562 MDR-TB lineage2.2.1 None
ERR8699107 Pre-XDR-TB lineage2.2.1 None
ERR6865369 MDR-TB lineage4.1.1.3 None
ERR7362012 MDR-TB lineage2.2.1 None
SRR24256032 Pre-XDR-TB lineage2.2.1 None
SRR1011522 Pre-XDR-TB lineage4.5 None
SRR1011518 Pre-XDR-TB lineage4.5 None
SRR10525337 MDR-TB lineage4.8 None
SRR10430361 MDR-TB lineage2.2.1 None
SRR14801964 Pre-XDR-TB lineage2.2.1 None
SRR10869174 Pre-XDR-TB lineage2.2.1 None
SRR10869281 Pre-XDR-TB lineage2.2.2;lineage2.2.1 None
SRR13120446 MDR-TB lineage2.2.1 None
SRR10869098 MDR-TB lineage2.2.1 None
SRR10869274 Pre-XDR-TB lineage2.2.1 None
SRR11786873 MDR-TB lineage2.2.1 None
SRR14807658 Pre-XDR-TB lineage2.2.1 None
SRR14802204 Pre-XDR-TB lineage2.2.1 None
SRR16156222 MDR-TB lineage2.2.1 None
SRR16156242 MDR-TB lineage2.2.1 None
SRR16156231 MDR-TB lineage2.2.1 None
SRR16156221 MDR-TB lineage2.2.1 None
SRR16156797 Pre-XDR-TB lineage2.2.1 None
SRR16156737 MDR-TB lineage2.2.1 None
SRR16156783 Pre-XDR-TB lineage2.2.1 None
SRR16156803 Pre-XDR-TB lineage2.2.1 None
SRR18715308 Pre-XDR-TB lineage2.2.1 None
SRR18715489 Pre-XDR-TB lineage2.2.1 None
SRR25827371 Pre-XDR-TB lineage4.8;lineage2.2.1 None
SRR25827615 Pre-XDR-TB lineage2.2.1 None
SRR25827529 Pre-XDR-TB lineage4.8;lineage2.2.1 None
ERR11082612 MDR-TB lineage4.2.1 None
SRR21576687 MDR-TB lineage1.2.1.2 None
ERR11068857 Pre-XDR-TB lineage2.2.1 None
ERR11080875 MDR-TB lineage4.2.1.1 None
SRR847775 Pre-XDR-TB lineage4.3.3 za
ERR8025699 Pre-XDR-TB lineage2.2.1 None
ERR9807001 Pre-XDR-TB lineage2.2.1 None
SRR24710169 MDR-TB lineage2.2.1 None
SRR25827368 XDR-TB lineage4.1.2.1;lineage2.2.1 None
ERR553021 MDR-TB lineage1.2.2.2 sz
ERR11082833 RR-TB lineage2.2.1 None
ERR8025477 Pre-XDR-TB lineage2.2.1 None
ERR8025680 Pre-XDR-TB lineage2.2.1 None
ERR9806992 Pre-XDR-TB lineage2.2.1 None
SRR24256041 MDR-TB lineage2.2.1 None
SRR25827394 XDR-TB lineage4.9;lineage3;lineage2.2.1 None
SRR25827631 Pre-XDR-TB lineage3;lineage2.2.1 None
ERR133843 Pre-XDR-TB lineage2.2.1 ru
ERR7911610 Pre-XDR-TB lineage4.1.1.3 za
ERR7911072 MDR-TB lineage2.2.1 za
ERR4799070 Pre-XDR-TB lineage2.2.1 in
ERR1873554 Pre-XDR-TB lineage4.1.1.3 za
SRR23310910 HR-TB lineage2.2 None
ERR4799890 Pre-XDR-TB lineage2.2.1 in
SAMEA2533570 MDR-TB lineage2.2.1 uz
SRR23311039 HR-TB lineage2.2 None
ERR4798825 Pre-XDR-TB lineage2.2.1 in
ERR4797556 Pre-XDR-TB lineage2.2.1 in
ERR4797802 Pre-XDR-TB lineage2.2.1 in
ERR4799206 XDR-TB lineage2.2.1 in
ERR4797632 Pre-XDR-TB lineage2.2.1 in
ERR4798972 Pre-XDR-TB lineage2.2.1 in
ERR4798928 MDR-TB lineage2.2.1 in
ERR4799040 Pre-XDR-TB lineage2.2.1 in
ERR4798919 Pre-XDR-TB lineage2.2.1 in
ERR2516249 MDR-TB lineage2.2.1 be
ERR4796399 Pre-XDR-TB lineage2.2.1 in
ERR2516514 Pre-XDR-TB lineage4.1.2 pe
ERR4798056 Pre-XDR-TB lineage2.2.1 in
ERR4797952 Pre-XDR-TB lineage2.2.1 in
ERR4798191 Pre-XDR-TB lineage2.2.1 in
ERR4796529 Pre-XDR-TB lineage2.2.1 in
ERR4796973 Pre-XDR-TB lineage2.2.1 in
ERR2516496 MDR-TB lineage4.3.3 pe
ERR4796646 Pre-XDR-TB lineage2.2.1 in
ERR4799845 Pre-XDR-TB lineage2.2.1 in
ERR4798259 Pre-XDR-TB lineage2.2.1 in
ERR4796440 Pre-XDR-TB lineage2.2.1 in
ERR4796347 Pre-XDR-TB lineage3.1.2.1;lineage2.2.1;lineage1.2.2.2 in
ERR4796655 MDR-TB lineage2.2.1 in
ERR4796660 Pre-XDR-TB lineage2.2.1 in
ERR4796623 MDR-TB lineage2.2.1 in
ERR4799578 Pre-XDR-TB lineage2.2.1 in
ERR4796988 Pre-XDR-TB lineage2.2.1 in
ERR4796974 Pre-XDR-TB lineage2.2.1 in
ERR4798232 Pre-XDR-TB lineage2.2.1 in
ERR4796905 Pre-XDR-TB lineage2.2.1 in
ERR4798476 Pre-XDR-TB lineage2.2.1 in
ERR4799406 Pre-XDR-TB lineage2.2.1 in
ERR4799163 Pre-XDR-TB lineage4.2.2.2 in
ERR4797070 Pre-XDR-TB lineage2.2.1 in
ERR4798394 Pre-XDR-TB lineage2.2.1 in
ERR4797160 Pre-XDR-TB lineage2.2.1 in
ERR4797187 Pre-XDR-TB lineage2.2.1 in
ERR4799165 Pre-XDR-TB lineage3 in
ERR4798460 Pre-XDR-TB lineage2.2.1 in
ERR4797172 Pre-XDR-TB lineage2.2.1 in
ERR4798667 Pre-XDR-TB lineage2.2.1 in
SRR6485130 Pre-XDR-TB lineage2.2.1 None
ERR4800428 Pre-XDR-TB lineage2.2.1 in
ERR4798695 Pre-XDR-TB lineage2.2.1 in
ERR4797492 Pre-XDR-TB lineage2.2.1 in
ERR4799303 Pre-XDR-TB lineage2.2.1 in
ERR4797550 Pre-XDR-TB lineage2.2.1 in
ERR4797620 Pre-XDR-TB lineage2.2.1 in
ERR4797617 Pre-XDR-TB lineage2.2.1 in
ERR4799336 Pre-XDR-TB lineage4.2.2.2 in
ERR4797469 Pre-XDR-TB lineage2.2.1 in
ERR4799765 Pre-XDR-TB lineage2.2.1 in
ERR4800062 Pre-XDR-TB lineage2.2.1 in
ERR4799521 Pre-XDR-TB lineage2.2.1 in
ERR4800337 Pre-XDR-TB lineage2.2.1 in
ERR4800576 Pre-XDR-TB lineage2.2.1 in