Rv2416c - c.-10G>C


Drug resistance types
0 Sensitive 3 RR-TB 0 HR-TB 76 MDR-TB 134 Pre-XDR-TB 5 XDR-TB 0 Other
lineage Counts
lineage Count
lineage2.2.1;lineage4 2
lineage2.2.1 162
lineage2.2.1;lineage4.8 3
lineage4.2.1.1 2
lineage2.2.1;lineage4.5 1
lineage4.5 12
lineage4.3.3 7
lineage1.2.1.2 1
lineage2.2.1.1 1
lineage4.2.2.2 2
lineage4.1.1.3 4
lineage2.2.1;lineage4.3.3 1
lineage2.2.1;lineage2.2.2 1
lineage4.4.2 1
lineage4.1.2 1
lineage1.2.2.2 2
lineage4.2.1 2
lineage2.2.1;lineage4.1.2.1 1
lineage4.8 4
lineage3 1
lineage2.2.1;lineage3 2
lineage2.2.1;lineage3;lineage4.9 1
lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1 1
lineage4.9 1
lineage4.3.4.2 1
lineage2.2.2 1
spoligotype Counts
spoligotype Count
None 218
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR11043052 MDR-TB lineage2.2.1;lineage4 None
ERR8025699 Pre-XDR-TB lineage2.2.1 None
ERR13266729 Pre-XDR-TB lineage2.2.1 None
SRR29093257 Pre-XDR-TB lineage2.2.1 None
SRR29056077 Pre-XDR-TB lineage2.2.1 None
ERR4798394 Pre-XDR-TB lineage2.2.1 in
SAMEA2533570 MDR-TB lineage2.2.1 uz
ERR13284517 MDR-TB lineage2.2.1 None
SRR14801964 Pre-XDR-TB lineage2.2.1 None
SRR29681226 MDR-TB lineage2.2.1 None
SRR25827529 Pre-XDR-TB lineage2.2.1;lineage4.8 None
SRR28714180 Pre-XDR-TB lineage4.2.1.1 None
ERR10748110 MDR-TB lineage2.2.1 None
ERR4799070 Pre-XDR-TB lineage2.2.1 in
ERR13290848 Pre-XDR-TB lineage2.2.1;lineage4.5 None
ERR4798695 Pre-XDR-TB lineage2.2.1 in
ERR13290946 MDR-TB lineage4.5 None
SRR24710169 MDR-TB lineage2.2.1 None
ERR4798259 Pre-XDR-TB lineage2.2.1 in
SRR28394246 MDR-TB lineage4.3.3 None
ERR13261096 Pre-XDR-TB lineage2.2.1 None
SRR924224 Pre-XDR-TB lineage4.3.3 None
SAMN01925657 Pre-XDR-TB lineage4.3.3 None
SRR10040214 MDR-TB lineage4.5 None
ERR13261248 Pre-XDR-TB lineage2.2.1 None
ERR4799765 Pre-XDR-TB lineage2.2.1 in
SRR16156242 MDR-TB lineage2.2.1 None
ERR10748322 MDR-TB lineage2.2.1 None
SRR21576687 MDR-TB lineage1.2.1.2 None
ERR10748324 MDR-TB lineage2.2.1 None
ERR4797556 Pre-XDR-TB lineage2.2.1 in
ERR4799552 Pre-XDR-TB lineage2.2.1.1 None
SRR7653609 Pre-XDR-TB lineage2.2.1 None
ERR4798056 Pre-XDR-TB lineage2.2.1 in
ERR11080875 MDR-TB lineage4.2.1.1 None
ERR4798191 Pre-XDR-TB lineage2.2.1 in
ERR4872350 Pre-XDR-TB lineage2.2.1 None
SRR10869274 Pre-XDR-TB lineage2.2.1 None
SRR16088562 MDR-TB lineage2.2.1 None
ERR4799163 Pre-XDR-TB lineage4.2.2.2 in
ERR550929 Pre-XDR-TB lineage2.2.1 None
ERR4799578 Pre-XDR-TB lineage2.2.1 in
ERR4797632 Pre-XDR-TB lineage2.2.1 in
SRR25827371 Pre-XDR-TB lineage2.2.1;lineage4.8 None
SRR1011522 Pre-XDR-TB lineage4.5 None
ERR8975741 RR-TB lineage2.2.1 None
ERR552437 MDR-TB lineage2.2.1 None
ERR4797617 Pre-XDR-TB lineage2.2.1 in
ERR1873554 Pre-XDR-TB lineage4.1.1.3 za
ERR4797492 Pre-XDR-TB lineage2.2.1 in
ERR10748521 MDR-TB lineage2.2.1 None
ERR4797550 Pre-XDR-TB lineage2.2.1 in
ERR4799521 Pre-XDR-TB lineage2.2.1 in
SRR29681370 MDR-TB lineage2.2.1 None
SRR29056090 Pre-XDR-TB lineage2.2.1 None
ERR8025477 Pre-XDR-TB lineage2.2.1 None
ERR13261486 Pre-XDR-TB lineage2.2.1 None
SRR28706388 MDR-TB lineage2.2.1 None
ERR2516496 MDR-TB lineage4.3.3 pe
ERR13291058 Pre-XDR-TB lineage4.5 None
SRR29539710 MDR-TB lineage2.2.1 None
SRR29539782 MDR-TB lineage2.2.1;lineage4.3.3 None
SRR29681225 MDR-TB lineage2.2.1 None
SRR29539038 MDR-TB lineage2.2.1 None
SRR29539158 MDR-TB lineage2.2.1 None
ERR4797160 Pre-XDR-TB lineage2.2.1 in
SRR23311039 Pre-XDR-TB lineage2.2.1 None
ERR4796399 Pre-XDR-TB lineage2.2.1 in
ERR7362012 MDR-TB lineage2.2.1 None
SRR10430361 MDR-TB lineage2.2.1 None
SRR10869281 Pre-XDR-TB lineage2.2.1;lineage2.2.2 None
ERR7911072 MDR-TB lineage2.2.1 za
ERR2516249 MDR-TB lineage2.2.1 be
ERR4800337 Pre-XDR-TB lineage2.2.1 in
ERR13290917 Pre-XDR-TB lineage4.5 None
ERR8699107 Pre-XDR-TB lineage2.2.1 None
SRR29539584 MDR-TB lineage2.2.1 None
ERR4797187 Pre-XDR-TB lineage2.2.1 in
SRR29056044 Pre-XDR-TB lineage2.2.1 None
SRR10303284 MDR-TB lineage2.2.1 None
ERR4798839 Pre-XDR-TB lineage2.2.1 None
ERR552403 MDR-TB lineage2.2.1 None
ERR4796655 MDR-TB lineage2.2.1 in
ERR4800428 Pre-XDR-TB lineage2.2.1 in
ERR4796988 Pre-XDR-TB lineage2.2.1 in
SRR16156222 MDR-TB lineage2.2.1 None
SRR28351487 Pre-XDR-TB lineage2.2.1 None
ERR13288802 Pre-XDR-TB lineage2.2.1 None
ERR8975852 XDR-TB lineage2.2.1 None
ERR4799206 XDR-TB lineage2.2.1 in
SRR16156797 Pre-XDR-TB lineage2.2.1 None
ERR551740 MDR-TB lineage2.2.1 None
SRR18715489 Pre-XDR-TB lineage2.2.1 None
ERR9806992 Pre-XDR-TB lineage2.2.1 None
SRR10040452 MDR-TB lineage4.4.2 None
ERR4799845 Pre-XDR-TB lineage2.2.1 in
ERR9807001 Pre-XDR-TB lineage2.2.1 None
ERR7362005 Pre-XDR-TB lineage2.2.1 None
SRR6485130 MDR-TB lineage2.2.1 None
SRR29093312 MDR-TB lineage2.2.1 None
SRR18715308 Pre-XDR-TB lineage2.2.1 None
SRR847775 Pre-XDR-TB lineage4.3.3 za
ERR13261980 Pre-XDR-TB lineage2.2.1 None
ERR5865854 Pre-XDR-TB lineage2.2.1 None
SRR6831722 MDR-TB lineage2.2.1 None
SRR25827615 Pre-XDR-TB lineage2.2.1 None
ERR2516514 Pre-XDR-TB lineage4.1.2 pe
SRR13120446 MDR-TB lineage2.2.1 None
ERR550928_ERR550929 MDR-TB lineage2.2.1 None
ERR553020 MDR-TB lineage1.2.2.2 None
SRR16156231 MDR-TB lineage2.2.1 None
ERR4799303 Pre-XDR-TB lineage2.2.1 in
ERR553021 MDR-TB lineage1.2.2.2 sz
ERR11082612 MDR-TB lineage4.2.1 None
SRR14807658 Pre-XDR-TB lineage2.2.1 None
ERR4798928 MDR-TB lineage2.2.1 in
ERR4796529 Pre-XDR-TB lineage2.2.1 in
ERR7975686 MDR-TB lineage4.3.3 None
ERR4800062 Pre-XDR-TB lineage2.2.1 in
ERR3794386 MDR-TB lineage2.2.1 None
SRR25827368 XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR4798919 Pre-XDR-TB lineage2.2.1 in
SRR28351464 Pre-XDR-TB lineage2.2.1 None
ERR4798667 Pre-XDR-TB lineage2.2.1 in
ERR133843 Pre-XDR-TB lineage2.2.1 ru
ERR4799890 Pre-XDR-TB lineage2.2.1 in
ERR4797469 Pre-XDR-TB lineage2.2.1 in
ERR13266997 Pre-XDR-TB lineage2.2.1 None
SRR23310910 Pre-XDR-TB lineage2.2.1 None
SRR29093952 Pre-XDR-TB lineage2.2.1 None
SRR29273943 MDR-TB lineage4.8 None
ERR4796905 Pre-XDR-TB lineage2.2.1 in
ERR4796974 Pre-XDR-TB lineage2.2.1 in
ERR4863406 Pre-XDR-TB lineage2.2.1 None
ERR4796646 Pre-XDR-TB lineage2.2.1 in
ERR4798972 Pre-XDR-TB lineage2.2.1 in
SRR28045254 Pre-XDR-TB lineage2.2.1 None
ERR4799040 XDR-TB lineage2.2.1 in
SRR7652996 MDR-TB lineage4.2.1 None
ERR4798825 Pre-XDR-TB lineage2.2.1 in
ERR4799165 Pre-XDR-TB lineage3 in
SRR14802204 Pre-XDR-TB lineage2.2.1 None
SRR16156221 MDR-TB lineage2.2.1 None
SRR28393813 Pre-XDR-TB lineage4.8 None
ERR13267008 Pre-XDR-TB lineage2.2.1 None
SRR25515560 MDR-TB lineage2.2.1 None
SRR28351502 Pre-XDR-TB lineage2.2.1 None
SRR28046321 Pre-XDR-TB lineage2.2.1 None
ERR13290971 MDR-TB lineage4.5 None
ERR4797070 Pre-XDR-TB lineage2.2.1 in
SRR30180260 MDR-TB lineage4.5 None
SRR7592339 Pre-XDR-TB lineage4.8 None
SRR24256032 Pre-XDR-TB lineage2.2.1 None
SRR25827827 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4798460 Pre-XDR-TB lineage2.2.1 in
SRR29539585 MDR-TB lineage2.2.1 None
ERR4798476 Pre-XDR-TB lineage2.2.1 in
SRR29055808 Pre-XDR-TB lineage2.2.1 None
ERR4796440 Pre-XDR-TB lineage2.2.1 in
ERR13284438 MDR-TB lineage2.2.1 None
ERR4796623 MDR-TB lineage2.2.1 in
ERR4797172 Pre-XDR-TB lineage2.2.1 in
ERR4797802 Pre-XDR-TB lineage2.2.1 in
SRR1011521 Pre-XDR-TB lineage4.5 None
ERR7911610 Pre-XDR-TB lineage4.1.1.3 za
ERR13276379 MDR-TB lineage2.2.1 None
SRR29681310 MDR-TB lineage2.2.1 None
SRR16156803 Pre-XDR-TB lineage2.2.1 None
ERR4799406 Pre-XDR-TB lineage2.2.1 in
ERR4872322 Pre-XDR-TB lineage2.2.1 None
SRR25827631 Pre-XDR-TB lineage2.2.1;lineage3 None
ERR4796660 Pre-XDR-TB lineage2.2.1 in
SRR10869098 MDR-TB lineage2.2.1 None
ERR4797620 Pre-XDR-TB lineage2.2.1 in
ERR11043470 MDR-TB lineage2.2.1 None
ERR11044112 Pre-XDR-TB lineage2.2.1 None
ERR8025680 Pre-XDR-TB lineage2.2.1 None
ERR550928 MDR-TB lineage2.2.1 None
ERR4799336 Pre-XDR-TB lineage4.2.2.2 in
ERR5865853 Pre-XDR-TB lineage2.2.1 None
SRR25827394 XDR-TB lineage2.2.1;lineage3;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR13284693 MDR-TB lineage2.2.1;lineage4 None
ERR4024838 MDR-TB lineage4.1.1.3 None
ERR4796347 Pre-XDR-TB lineage1.2.2.2;lineage2.2.1;lineage3.1.2.1 in
SRR833219 Pre-XDR-TB lineage4.5 None
ERR4800576 Pre-XDR-TB lineage2.2.1 in
SRR1019192 Pre-XDR-TB lineage4.5 None
ERR4797952 Pre-XDR-TB lineage2.2.1 in
DRR474002 RR-TB lineage4.9 None
ERR11082833 RR-TB lineage2.2.1 None
ERR8774357 Pre-XDR-TB lineage2.2.1 None
ERR551339 MDR-TB lineage2.2.1 None
ERR6865369 MDR-TB lineage4.1.1.3 None
ERR13276199 Pre-XDR-TB lineage2.2.1 None
ERR4798232 Pre-XDR-TB lineage2.2.1 in
SRR1011518 Pre-XDR-TB lineage4.5 None
ERR13266624 Pre-XDR-TB lineage2.2.1 None
SRR10525337 MDR-TB lineage4.8 None
SRR29681424 MDR-TB lineage2.2.1 None
SRR24256041 MDR-TB lineage2.2.1 None
SRR28394188 MDR-TB lineage4.3.3 None
SRR28046124 Pre-XDR-TB lineage2.2.1 None
SRR29539684 MDR-TB lineage2.2.1 None
SRR29539851 Pre-XDR-TB lineage4.3.4.2 None
ERR13265094 Pre-XDR-TB lineage2.2.2 None
SRR29539370 MDR-TB lineage2.2.1;lineage4.8 None
SRR11786873 MDR-TB lineage2.2.1 None
SRR16156737 MDR-TB lineage2.2.1 None
SRR29055592 Pre-XDR-TB lineage2.2.1 None
SRR833216 Pre-XDR-TB lineage4.5 None
ERR4796973 Pre-XDR-TB lineage2.2.1 in
ERR11068857 Pre-XDR-TB lineage2.2.1 None
SRR29539783 Pre-XDR-TB lineage2.2.1 None
SRR6831862 Pre-XDR-TB lineage2.2.1 None
ERR5917991 MDR-TB lineage2.2.1 za
ERR10748341 MDR-TB lineage2.2.1 None
SRR16156783 Pre-XDR-TB lineage2.2.1 None