Rv2428 - c.-72C>T


Drug resistance types
10 Sensitive 21 RR-TB 24 HR-TB 71 MDR-TB 27 Pre-XDR-TB 0 XDR-TB 5 Other
lineage Counts
lineage Count
lineage4.1 1
lineage4.2.2.2 18
lineage2.2.1 44
lineage4.1.2.1 19
lineage2.2.1.1 12
lineage4.1.2 8
lineage4.1.1.1 2
lineage2.1 1
lineage2.2.1;lineage4.1.2.1 1
lineage4.8 4
lineage3 4
lineage4.2.2 3
lineage2.2.2 4
lineage6.3.1 2
lineage4.1.1.3 3
lineage4.4 2
lineage4.6.1.2 4
lineage4.5 3
lineage4.4.1.1 1
lineage4.4.2 1
lineage4.3.3 7
lineage4.3.4.2 6
lineage4.9 4
lineage2.2.1;lineage4.9 1
lineage7 1
lineage3.1.2 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 158
Geographic prevalence
Country level data for this variant is available for 57 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR10680100 MDR-TB lineage4.1 None
ERR2517569 MDR-TB lineage4.2.2.2 nl
DRR130107 Pre-XDR-TB lineage2.2.1 None
SRR13583390 HR-TB lineage4.1.2.1 None
SRR17658029 RR-TB lineage4.1.2.1 None
SRR1173728 MDR-TB lineage2.2.1.1 None
ERR552899 MDR-TB lineage2.2.1 None
SRR1173542 MDR-TB lineage4.1.2 None
SRR6397670 HR-TB lineage4.1.1.1 ca
ERR4830803 Pre-XDR-TB lineage4.2.2.2 et
SRR1173217 MDR-TB lineage2.2.1.1 None
ERR4831637 MDR-TB lineage2.1 vn
ERR144618 HR-TB lineage2.2.1;lineage4.1.2.1 ru
SRR21727895 Other lineage2.2.1 None
ERR2446183 MDR-TB lineage4.2.2.2 nl
ERR12268385 HR-TB lineage4.8 None
SRR28119743 MDR-TB lineage2.2.1.1 None
ERR2510631 Pre-XDR-TB lineage3 pk
SRR1172854 MDR-TB lineage2.2.1.1 None
SRR1162897 Pre-XDR-TB lineage4.2.2.2 None
ERR4830822 Pre-XDR-TB lineage4.2.2.2 et
ERR4810959 MDR-TB lineage2.2.1 cn
SRR17658031 RR-TB lineage4.1.2.1 None
SRR16370547 MDR-TB lineage4.2.2 None
SRR25534575 Pre-XDR-TB lineage2.2.1 None
ERR552901 MDR-TB lineage2.2.1 None
SRR6824435 MDR-TB lineage2.2.1.1 cn
SRR16370537 MDR-TB lineage2.2.2 None
SRR17658030 RR-TB lineage4.1.2.1 None
SAMEA2534988 MDR-TB lineage2.2.1 uz
ERR841496 RR-TB lineage6.3.1 None
ERR10680086 RR-TB lineage4.8 None
ERR552900 MDR-TB lineage2.2.1 None
ERR9806839 MDR-TB lineage2.2.1 None
ERR126642 HR-TB lineage4.1.1.3 mw
ERR9125564 Sensitive lineage4.4 None
ERR552900_ERR552901_ERR552899 MDR-TB lineage2.2.1 None
ERR11080910 RR-TB lineage4.2.2.2 None
ERR4810991 MDR-TB lineage2.2.1 cn
ERR1654674 MDR-TB lineage4.6.1.2 None
ERR2179621 HR-TB lineage4.1.1.3 cn
ERR133961 HR-TB lineage4.1.2.1 ru
SRR1062866 Pre-XDR-TB lineage4.1.2 None
SRR671799 Pre-XDR-TB lineage2.2.1 cn
ERR4810566 Sensitive lineage2.2.1 cn
SRR1167151 Pre-XDR-TB lineage4.2.2.2 None
SRR16058161 Sensitive lineage4.4 None
ERR551730 RR-TB lineage2.2.1 None
SAMN02599095 MDR-TB lineage2.2.1.1 in
ERR2707123 MDR-TB lineage4.6.1.2 cd
SRR671750 Pre-XDR-TB lineage4.5 cn
SRR15315980 RR-TB lineage2.2.1 None
SRR21277858 MDR-TB lineage2.2.1 None
ERR9992649 MDR-TB lineage2.2.1 None
SRR17658032 RR-TB lineage4.1.2.1 None
ERR3275336 MDR-TB lineage4.2.2.2 nl
ERR144559 HR-TB lineage4.1.2.1 ru
ERR751428 HR-TB lineage4.1.2.1 pe
ERR245774 HR-TB lineage4.1.2.1 mw
SRR25206969 RR-TB lineage2.2.1 None
SRR15014678 MDR-TB lineage2.2.1.1 None
ERR3287590 MDR-TB lineage4.4.1.1 pe
ERR4812885 HR-TB lineage2.2.1 pe
ERR12796623 MDR-TB lineage3 None
SRR10040146 RR-TB lineage4.4.2 None
ERR551731 RR-TB lineage2.2.1 None
ERR1199096 MDR-TB lineage4.6.1.2 cd
SRR15723195 Other lineage2.2.1 None
SRR5818616 MDR-TB lineage2.2.1 dj
SRR1167303 MDR-TB lineage4.1.2 None
ERR2515993 HR-TB lineage4.1.2.1 za
SRR1166935 Pre-XDR-TB lineage4.2.2.2 None
SRR8651658 Pre-XDR-TB lineage2.2.1 cn
ERR3183991 RR-TB lineage6.3.1 None
SRR10430319 MDR-TB lineage4.3.3 None
ERR9121741 Sensitive lineage4.3.4.2 None
ERR10680066 RR-TB lineage4.1.1.1 None
SAMN02599096 MDR-TB lineage2.2.1.1 in
SRR15904139 MDR-TB lineage2.2.2 None
ERR1035356 Pre-XDR-TB lineage4.3.4.2 br
ERR551730_ERR551731 RR-TB lineage2.2.1 None
SRR10305947 HR-TB lineage2.2.1 None
SRR17657934 RR-TB lineage4.1.2.1 None
SRR23339945 MDR-TB lineage4.2.2 None
SRR10040192 MDR-TB lineage2.2.1 None
ERR9806630 MDR-TB lineage2.2.1.1 None
SAMN02414970 Pre-XDR-TB lineage4.2.2.2 se
SAMN02403637 MDR-TB lineage4.1.2 za
SRR6397665 RR-TB lineage2.2.1 ca
ERR4830830 Pre-XDR-TB lineage4.2.2.2 et
SRR1165366 Pre-XDR-TB lineage4.2.2.2 None
SAMEA2534152 RR-TB lineage2.2.1 uz
ERR7911117 MDR-TB lineage2.2.2 vn
SRR10303294 MDR-TB lineage4.3.3 None
SRR6797332 MDR-TB lineage4.9 None
ERR10680176 MDR-TB lineage4.1.2.1 None
ERR7737624 MDR-TB lineage4.2.2.2 None
SRR15369028 Pre-XDR-TB lineage2.2.1 None
ERR294245 Other lineage4.9 None
SRR6855833 HR-TB lineage4.1.2.1 None
ERR2707057 MDR-TB lineage4.6.1.2 cd
ERR751610 HR-TB lineage4.1.2.1 pe
ERR1035358 Pre-XDR-TB lineage4.3.4.2 br
SRR3082088 MDR-TB lineage2.2.1 None
SRR1013529 Pre-XDR-TB lineage4.1.2 None
SRR671770 Pre-XDR-TB lineage2.2.1 cn
SRR6339642 MDR-TB lineage3 au
ERR4815378 Sensitive lineage3 None
SRR6397630 RR-TB lineage2.2.1 ca
SRR2101037 Other lineage4.9 None
SRR13583437 HR-TB lineage4.3.3 None
SRR1723659 MDR-TB lineage2.2.1;lineage4.9 None
SRR28240166 HR-TB lineage4.8 None
ERR4830799 MDR-TB lineage4.2.2.2 et
ERR4830805 MDR-TB lineage4.2.2.2 et
SRR1165297 MDR-TB lineage4.1.2 None
ERR7737654 MDR-TB lineage4.2.2.2 None
SRR23650981 HR-TB lineage4.9 None
SRR25515393 MDR-TB lineage2.2.1 None
SRR15316368 Pre-XDR-TB lineage2.2.1 None
SRR17658033 RR-TB lineage4.1.2.1 None
SRR1175145 MDR-TB lineage2.2.1.1 None
SRR20139560 MDR-TB lineage4.8 None
SRR15316366 Pre-XDR-TB lineage2.2.1 None
ERR7737753 MDR-TB lineage7 None
ERR4830845 MDR-TB lineage4.2.2.2 et
ERR11081248 Sensitive lineage4.1.2.1 None
ERR4813356 MDR-TB lineage4.3.3 pe
ERR10680197 HR-TB lineage4.3.3 None
ERR4195808 Sensitive lineage4.3.4.2 None
SRR6832050 HR-TB lineage4.3.3 None
ERR10680198 HR-TB lineage4.3.3 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
ERR10610104 MDR-TB lineage2.2.1 None
SRR1724014 HR-TB lineage4.1.1.3 cn
ERR4821152 Sensitive lineage3.1.2 gb
SRR25206973 MDR-TB lineage2.2.1 None
ERR4011971 MDR-TB lineage4.2.2.2 None
SRR1173820 MDR-TB lineage4.1.2 None
ERR7911325 MDR-TB lineage4.2.2 vn
ERR4195615 Sensitive lineage4.3.4.2 None
SRR671774 Pre-XDR-TB lineage4.5 cn
SRR17657979 RR-TB lineage4.1.2.1 None
SRR12420460 MDR-TB lineage2.2.2 None
ERR751837 MDR-TB lineage2.2.1 th
ERR2510509 Pre-XDR-TB lineage4.1.2.1 None
ERR502937 MDR-TB lineage2.2.1 None
ERR718273 MDR-TB lineage2.2.1 th
SRR21277617 Other lineage2.2.1.1 None
ERR10610372 MDR-TB lineage2.2.1.1 None
ERR3287622 HR-TB lineage4.1.2.1 pe
SRR13583315 HR-TB lineage4.1.1 None
SAMN02336788 Pre-XDR-TB lineage4.1.2 za
ERR9121405 Sensitive lineage4.3.4.2 None
SRR3085339 MDR-TB lineage2.2.1 None
SRR671769 Pre-XDR-TB lineage4.5 cn
ERR4830539 MDR-TB lineage2.2.1 None
SRR15368789 MDR-TB lineage2.2.1 None