Rv2428 - c.-72C>T


Drug resistance types
11 Sensitive 22 RR-TB 25 HR-TB 77 MDR-TB 30 Pre-XDR-TB 0 XDR-TB 5 Other
lineage Counts
lineage Count
lineage2.2.1 45
lineage4.1.2 8
lineage4.3.3 8
lineage4.3.4.2 6
lineage4.1.2.1 20
lineage4.2.2.2 22
lineage3 4
lineage6.3.1 2
lineage4.8 4
lineage2.2.1.1 13
lineage4.2.2 3
lineage4.6.1.2 5
lineage2.2.2 4
lineage4.9 4
lineage4.1.1.1 2
lineage4.1.1 1
lineage4.4.2 1
lineage2.1 1
lineage4.5 3
lineage4.1 1
lineage4.4.1.1 1
lineage2.2.1;lineage4.9 1
lineage4.3.4.1 2
lineage4.1.1.3 3
lineage4.4 2
lineage3.1.2 1
lineage7 1
lineage4.2.1 1
lineage2.2.1;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 170
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR21277858 MDR-TB lineage2.2.1 None
SRR1173820 MDR-TB lineage4.1.2 None
SRR10430319 MDR-TB lineage4.3.3 None
ERR1035358 Pre-XDR-TB lineage4.3.4.2 br
SAMEA2534988 MDR-TB lineage2.2.1 uz
ERR751428 HR-TB lineage4.1.2.1 pe
ERR2446183 MDR-TB lineage4.2.2.2 nl
SRR29096523 MDR-TB lineage4.2.2.2 None
ERR4830845 MDR-TB lineage4.2.2.2 et
SRR6339642 MDR-TB lineage3 au
ERR552899 MDR-TB lineage2.2.1 None
ERR3183991 RR-TB lineage6.3.1 None
ERR4812885 HR-TB lineage2.2.1 pe
SRR28240166 HR-TB lineage4.8 None
SRR1062866 Pre-XDR-TB lineage4.1.2 None
ERR2510631 Pre-XDR-TB lineage3 pk
ERR7737654 MDR-TB lineage4.2.2.2 None
SRR15014678 MDR-TB lineage2.2.1.1 None
SRR25206969 RR-TB lineage2.2.1 None
SRR17657934 RR-TB lineage4.1.2.1 None
SRR23339945 MDR-TB lineage4.2.2 None
SRR29231844 MDR-TB lineage4.6.1.2 None
ERR9992649 MDR-TB lineage2.2.1 None
ERR4830822 Pre-XDR-TB lineage4.2.2.2 et
ERR10680176 MDR-TB lineage4.1.2.1 None
ERR1199096 MDR-TB lineage4.6.1.2 cd
SRR6824435 MDR-TB lineage2.2.1.1 cn
SRR16370537 MDR-TB lineage2.2.2 None
SRR1167303 MDR-TB lineage4.1.2 None
ERR294245 Other lineage4.9 None
SRR29051225 HR-TB lineage4.3.3 None
ERR10680066 RR-TB lineage4.1.1.1 None
ERR2515993 HR-TB lineage4.1.2.1 za
SRR1166935 Pre-XDR-TB lineage4.2.2.2 None
ERR10680086 RR-TB lineage4.8 None
SRR15316366 Pre-XDR-TB lineage2.2.1 None
SAMN02599096 MDR-TB lineage2.2.1.1 in
SRR2101037 Other lineage4.9 None
SRR5818616 MDR-TB lineage2.2.1 dj
ERR1035356 Pre-XDR-TB lineage4.3.4.2 br
ERR12268385 HR-TB lineage4.8 None
SRR10303294 MDR-TB lineage4.3.3 None
SRR17658030 RR-TB lineage4.1.2.1 None
ERR11080910 RR-TB lineage4.2.2.2 None
SRR8651658 Pre-XDR-TB lineage2.2.1 cn
SRR10040192 MDR-TB lineage2.2.1 None
SRR25206973 MDR-TB lineage2.2.1 None
ERR133961 HR-TB lineage4.1.2.1 ru
SRR6397665 RR-TB lineage2.2.1 ca
SRR1013529 Pre-XDR-TB lineage4.1.2 None
SRR12420460 MDR-TB lineage2.2.2 None
ERR718273 MDR-TB lineage2.2.1 th
ERR4830830 Pre-XDR-TB lineage4.2.2.2 et
SRR21277617 Other lineage2.2.1.1 None
ERR10610372 MDR-TB lineage2.2.1.1 None
ERR245774 HR-TB lineage4.1.2.1 mw
SRR13583315 HR-TB lineage4.1.1 None
ERR2707123 MDR-TB lineage4.6.1.2 cd
ERR2707057 MDR-TB lineage4.6.1.2 cd
ERR3275336 MDR-TB lineage4.2.2.2 nl
SRR17658029 RR-TB lineage4.1.2.1 None
ERR4815378 Sensitive lineage3 None
SRR6397630 RR-TB lineage2.2.1 ca
SRR17658033 RR-TB lineage4.1.2.1 None
ERR502937 MDR-TB lineage2.2.1 None
SRR15723195 Other lineage2.2.1 None
SRR671799 Pre-XDR-TB lineage2.2.1 cn
SRR10040146 RR-TB lineage4.4.2 None
ERR4831637 MDR-TB lineage2.1 vn
ERR4011971 MDR-TB lineage4.2.2.2 None
SRR20139560 MDR-TB lineage4.8 None
SRR671750 Pre-XDR-TB lineage4.5 cn
SRR6832050 HR-TB lineage4.3.3 None
SRR29050650 HR-TB lineage4.1.2.1 None
ERR4810991 MDR-TB lineage2.2.1 cn
ERR10680100 MDR-TB lineage4.1 None
SRR29772515 MDR-TB lineage2.2.1.1 None
ERR3287590 MDR-TB lineage4.4.1.1 pe
SRR15368789 MDR-TB lineage2.2.1 None
SRR1723659 MDR-TB lineage2.2.1;lineage4.9 None
SRR1172854 MDR-TB lineage2.2.1.1 None
ERR4810959 MDR-TB lineage2.2.1 cn
SRR17658031 RR-TB lineage4.1.2.1 None
ERR4810566 Sensitive lineage2.2.1 cn
SRR16370547 MDR-TB lineage4.2.2 None
SRR25534575 Pre-XDR-TB lineage2.2.1 None
SRR23650981 HR-TB lineage4.9 None
SRR29017566 MDR-TB lineage4.3.4.1 None
SRR1167151 Pre-XDR-TB lineage4.2.2.2 None
SRR1162897 Pre-XDR-TB lineage4.2.2.2 None
SRR15904139 MDR-TB lineage2.2.2 None
SRR671769 Pre-XDR-TB lineage4.5 cn
ERR552900 MDR-TB lineage2.2.1 None
ERR9806839 MDR-TB lineage2.2.1 None
ERR126642 HR-TB lineage4.1.1.3 mw
ERR9125564 Sensitive lineage4.4 None
ERR552900_ERR552901_ERR552899 MDR-TB lineage2.2.1 None
SRR10305947 HR-TB lineage2.2.1 None
ERR13285156 RR-TB lineage4.2.2.2 None
ERR551730_ERR551731 RR-TB lineage2.2.1 None
SRR11972369 Pre-XDR-TB lineage2.2.1 None
SRR6397670 HR-TB lineage4.1.1.1 ca
ERR1654674 MDR-TB lineage4.6.1.2 None
ERR751837 MDR-TB lineage2.2.1 th
SRR25515393 MDR-TB lineage2.2.1 None
ERR551730 RR-TB lineage2.2.1 None
SRR6855833 HR-TB lineage4.1.2.1 None
SAMN02599095 MDR-TB lineage2.2.1.1 in
SRR29050905 Sensitive lineage4.3.4.1 None
ERR751610 HR-TB lineage4.1.2.1 pe
SRR15315980 RR-TB lineage2.2.1 None
SRR1724014 HR-TB lineage4.1.1.3 cn
ERR13290600 Pre-XDR-TB lineage4.2.2.2 None
ERR2517569 MDR-TB lineage4.2.2.2 nl
SRR15316368 Pre-XDR-TB lineage2.2.1 None
ERR4830803 Pre-XDR-TB lineage4.2.2.2 et
ERR4830539 MDR-TB lineage2.2.1 None
SRR1173728 MDR-TB lineage2.2.1.1 None
SRR13583390 HR-TB lineage4.1.2.1 None
ERR12796623 MDR-TB lineage3 None
ERR144559 HR-TB lineage4.1.2.1 ru
ERR552901 MDR-TB lineage2.2.1 None
SRR28119743 MDR-TB lineage2.2.1.1 None
ERR4821152 Sensitive lineage3.1.2 gb
SRR671770 Pre-XDR-TB lineage2.2.1 cn
ERR841496 RR-TB lineage6.3.1 None
SRR1173217 MDR-TB lineage2.2.1.1 None
SRR3085339 MDR-TB lineage2.2.1 None
SRR17658032 RR-TB lineage4.1.2.1 None
ERR10610104 MDR-TB lineage2.2.1 None
ERR2179621 HR-TB lineage4.1.1.3 cn
ERR2510509 Pre-XDR-TB lineage4.1.2.1 None
ERR4830805 MDR-TB lineage4.2.2.2 et
ERR551731 RR-TB lineage2.2.1 None
SRR3082088 MDR-TB lineage2.2.1 None
ERR3287622 HR-TB lineage4.1.2.1 pe
SAMN02336788 Pre-XDR-TB lineage4.1.2 za
ERR4830799 MDR-TB lineage4.2.2.2 et
SRR1165366 Pre-XDR-TB lineage4.2.2.2 None
ERR13258368 Pre-XDR-TB lineage2.2.1 None
SAMN02414970 Pre-XDR-TB lineage4.2.2.2 se
SRR1175145 MDR-TB lineage2.2.1.1 None
SRR671774 Pre-XDR-TB lineage4.5 cn
ERR7911325 MDR-TB lineage4.2.2 vn
ERR7737753 MDR-TB lineage7 None
ERR11081248 Sensitive lineage4.1.2.1 None
ERR13290598 Pre-XDR-TB lineage4.2.2.2 None
ERR4813356 MDR-TB lineage4.3.3 pe
ERR10680197 MDR-TB lineage4.3.3 None
SRR1165297 MDR-TB lineage4.1.2 None
ERR10680198 MDR-TB lineage4.3.3 None
ERR13275937 HR-TB lineage4.2.1 None
DRR130107 Pre-XDR-TB lineage2.2.1 None
ERR9806630 MDR-TB lineage2.2.1.1 None
SRR1173542 MDR-TB lineage4.1.2 None
SRR13583437 HR-TB lineage4.3.3 None
SRR21727895 Other lineage2.2.1 None
ERR9121741 Sensitive lineage4.3.4.2 None
ERR4195615 Sensitive lineage4.3.4.2 None
SRR17657979 RR-TB lineage4.1.2.1 None
SAMN02403637 MDR-TB lineage4.1.2 za
SAMEA2534152 RR-TB lineage2.2.1 uz
ERR7911117 MDR-TB lineage2.2.2 vn
ERR144618 HR-TB lineage2.2.1;lineage4.1.2.1 ru
ERR4195808 Sensitive lineage4.3.4.2 None
SRR6797332 MDR-TB lineage4.9 None
ERR7737624 MDR-TB lineage4.2.2.2 None
SRR15369028 Pre-XDR-TB lineage2.2.1 None
SRR16058161 Sensitive lineage4.4 None
ERR9121405 Sensitive lineage4.3.4.2 None