ERR7911344
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28357662
|
Other
|
lineage4.1.1.3
|
None
|
SRR28381187
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR26112306
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR3287387
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28389831
|
Other
|
lineage4.1.1.3
|
None
|
ERR3287495
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813052
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR6879016
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3287331
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR18912072
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28389878
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3324329
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR751493
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR11972219
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR779881
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR21728177
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28393391
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28393619
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR775343
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR3148230
|
Sensitive
|
lineage4.1.1.3
|
mx
|
SRR18914183
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR3275515
|
Sensitive
|
lineage4.1.1.3
|
nl
|
ERR3287446
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR2510144
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR28393381
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3148207
|
Sensitive
|
lineage4.1.1.3
|
mx
|
ERR751392
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR779859
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR21713561
|
Other
|
lineage4.1.1.3
|
None
|
ERR3287867
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR18665439
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR13291765
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR2510213
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR6865369
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR779853
|
Sensitive
|
lineage4.1.1.3
|
pe
|
ERR2516515
|
Sensitive
|
lineage4.1.1.3
|
pe
|
ERR2516605
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR3287516
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813032
|
RR-TB
|
lineage4.1.1.3
|
pe
|
SRR29893832
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28394176
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR13261647
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR2516625
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR3287844
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4024920
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR29053129
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28393426
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28394237
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR22461584
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28393382
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28393792
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28389885
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28389890
|
Other
|
lineage4.1.1.3
|
None
|
ERR13110321
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR553045
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR28389834
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4812297
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR6865371
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR26111909
|
Other
|
lineage4.1.1.3
|
None
|
SRR28389827
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28514689
|
Other
|
lineage4.1.1.3
|
None
|
ERR4813316
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3287356
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR3287814
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR29055702
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28393545
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28394046
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1034741
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR2516525
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28389869
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4812817
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR1034714
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4025137
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR26112824
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR12118030
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR12118060
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR8774289
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR18665455
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4178120
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR2510147
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR28393746
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3287575
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR18665464
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4025073
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR3287383
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR6865391
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR3287883
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR751584
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR775314
|
RR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813699
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3287656
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28683939
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR21689478
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4813420
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28389906
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR22461603
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR6866046
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR3148166
|
Sensitive
|
lineage4.1.1.3
|
mx
|
ERR779896
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR13870362
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR21728710
|
Other
|
lineage4.1.1.3
|
None
|
ERR4024969
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4025013
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR28409678
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR16370418
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28705416
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28394219
|
MDR-TB
|
lineage4.1.1.3;lineage4.1.2.1
|
None
|
SRR27980490
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR28389842
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28514695
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28393392
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28705413
|
Other
|
lineage4.1.1.3
|
None
|
SRR28393708
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR28389850
|
Other
|
lineage4.1.1.3
|
None
|
SRR28683941
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR751529
|
Sensitive
|
lineage4.1.1.3
|
pe
|
ERR3287863
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4812775
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR29464859
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR30340066
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR30333237
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR30340067
|
Other
|
lineage4.1.1.3
|
None
|
SRR22248473
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR13110322
|
Sensitive
|
lineage4.8
|
None
|
ERR4178258
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR751510
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR775312
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813507
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR16915730
|
RR-TB
|
lineage4.1.1.3
|
None
|
SRR28389880
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR6865321
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR30182407
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR30049952
|
Other
|
lineage4.1.1.3
|
None
|
SRR28393443
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR6866036
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3287415
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813459
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR6865876
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4812697
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813219
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR775379
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR29219663
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SAMEA5570051
|
Pre-XDR-TB
|
lineage4.1.1.3;lineage4.3.4.2
|
None
|
ERR6866939
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR553045_ERR553047_ERR553046
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR28375402
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR2446396
|
Sensitive
|
lineage4.1.1.3
|
nl
|
ERR6865820
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4813174
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813094
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4178202
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR3287667
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR2516728
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28389899
|
Sensitive
|
lineage4.1.1.3
|
None
|
SAMEA2535095
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR751505
|
HR-TB
|
lineage4.1.1.3
|
pe
|
SRR19276644
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
ERR4812228
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR13292244
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR3148171
|
MDR-TB
|
lineage4.1.1.3
|
mx
|
SRR21658390
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4024838
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3287675
|
RR-TB
|
lineage4.1.1.3
|
pe
|
ERR4812375
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR751407
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR2516664
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4024562
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR26112039
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR6866049
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4812714
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR751634
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR3148159
|
MDR-TB
|
lineage4.1.1.3
|
mx
|
ERR751502
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR13870395
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4813336
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR4423646
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR6865757
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR4813199
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR2516543
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28389865
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR3287857
|
Pre-XDR-TB
|
lineage4.1.1.3;lineage4.3.4.2
|
None
|
ERR3287848
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR751627
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR16157124
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR751470
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813561
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR3287601
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28394225
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR7910867
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR2510222
|
HR-TB
|
lineage4.1.1.3
|
pe
|
ERR2516709
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR12117978
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR22461609
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR28357648
|
Other
|
lineage4.1.1.3
|
None
|
SRR28045686
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28389884
|
Pre-XDR-TB
|
lineage2.2.1.2;lineage4.1.1.3
|
None
|
SRR28357656
|
Other
|
lineage4.1.1.3
|
None
|
SRR28389859
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR22461702
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR2516663
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR28393654
|
MDR-TB
|
lineage4.1.1.3
|
None
|
SRR30049956
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR29893831
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28393884
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR30296334
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR29217207
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR12118065
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR12118032
|
Pre-XDR-TB
|
lineage4.1.1.3
|
None
|
SRR28381181
|
Other
|
lineage4.1.1.3
|
None
|
ERR775385
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR751625
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
SRR29217219
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR22248474
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR28389847
|
MDR-TB
|
lineage4.1.1.3
|
None
|
ERR7911375
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR4813213
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
SRR21675651
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR22248483
|
Sensitive
|
lineage4.1.1.3
|
None
|
ERR553046
|
HR-TB
|
lineage4.1.1.3
|
None
|
ERR3148168
|
HR-TB
|
lineage4.1.1.3
|
mx
|
ERR2515670
|
RR-TB
|
lineage4.1.1.3
|
None
|
ERR2516621
|
MDR-TB
|
lineage4.1.1.3
|
nl
|
ERR2516573
|
Pre-XDR-TB
|
lineage4.1.1.3
|
pe
|
ERR751404
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR751539
|
MDR-TB
|
lineage4.1.1.3
|
pe
|
ERR2515277
|
RR-TB
|
lineage4.1.1.3
|
za
|
ERR9029872
|
Pre-XDR-TB
|
lineage4.1.1.3;lineage4.3.4.2
|
None
|
ERR1034670
|
MDR-TB
|
lineage4.1.1.3
|
co
|
SRR28859954
|
Sensitive
|
lineage4.1.1.3
|
None
|
SRR18665442
|
MDR-TB
|
lineage4.1.1.3
|
None
|