lineage | Count |
---|---|
lineage2.2.1 | 200 |
lineage2.2.1;lineage4.1.2.1 | 5 |
lineage2.2.1;lineage4.3.4.1 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
lineage2.2.1;lineage4 | 1 |
La2;lineage2.2 | 1 |
La2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage4.2.2 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
lineage2.2.1;lineage4.2.1 | 1 |
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
lineage2.2.1;lineage4.3.3 | 1 |
La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 221 |
ID | Drug resistance | Lineage | Country iso2 |
---|---|---|---|
ERR5864557 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1172093 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
ERR4829933 | MDR-TB | lineage2.2.1 | pk |
ERR5865394 | MDR-TB | lineage2.2.1 | None |
ERR552931 | MDR-TB | lineage2.2.1 | None |
ERR5865393 | MDR-TB | lineage2.2.1 | None |
ERR11798527 | MDR-TB | lineage2.2.1 | None |
ERR8774579 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28351224 | MDR-TB | lineage2.2.1;lineage4.3.4.1 | None |
ERR8774576 | MDR-TB | lineage2.2.1 | None |
ERR7911418 | MDR-TB | lineage2.2.1 | us |
SRR16088214 | MDR-TB | lineage2.2.1 | None |
ERR1023366 | HR-TB | lineage2.2.1 | None |
ERR5864517 | MDR-TB | lineage2.2.1 | None |
ERR10762291 | MDR-TB | lineage2.2.1 | None |
SRR13232574 | Pre-XDR-TB | lineage2.2.1 | None |
SAMEA2533570 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534605 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534624 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534761 | MDR-TB | lineage2.2.1 | uz |
ERR4830770 | MDR-TB | lineage2.2.1 | ir |
ERR551659 | MDR-TB | lineage2.2.1 | None |
ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
ERR1559743 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1174838 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551059 | HR-TB | lineage2.2.1 | None |
SRR6256998 | RR-TB | lineage2.2.1 | None |
SRR24673510 | MDR-TB | lineage2.2.1 | None |
ERR5866426 | MDR-TB | lineage2.2.1 | None |
ERR551060 | HR-TB | lineage2.2.1 | None |
SRR5153218 | MDR-TB | lineage2.2.1 | None |
SRR1169109 | Pre-XDR-TB | lineage2.2.1 | None |
SRR7516442 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11082162 | MDR-TB | lineage2.2.1 | None |
ERR5865047 | MDR-TB | lineage2.2.1 | None |
ERR551081 | HR-TB | lineage2.2.1 | None |
SRR1163414 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10380050 | MDR-TB | lineage2.2.1 | None |
ERR552374 | MDR-TB | lineage2.2.1 | None |
ERR552911 | HR-TB | lineage2.2.1 | None |
ERR11081168 | MDR-TB | lineage2.2.1 | None |
ERR551659_ERR551660 | MDR-TB | lineage2.2.1 | None |
ERR4872356 | MDR-TB | lineage2.2.1 | None |
ERR5864554 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552374_ERR552373 | MDR-TB | lineage2.2.1 | None |
ERR5865936 | MDR-TB | lineage2.2.1 | None |
ERR5866118 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1163317 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1163036 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
ERR5865454 | MDR-TB | lineage2.2.1 | None |
SRR29681328 | HR-TB | lineage2.2.1 | None |
ERR11081016 | MDR-TB | lineage2.2.1 | None |
ERR5864514 | MDR-TB | lineage2.2.1 | None |
ERR11082479 | MDR-TB | lineage2.2.1 | None |
ERR8665754 | Pre-XDR-TB | lineage2.2.1 | None |
SRR16088436 | Pre-XDR-TB | lineage2.2.1 | None |
ERR550929 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552400 | MDR-TB | lineage2.2.1 | None |
ERR5865046 | MDR-TB | lineage2.2.1 | None |
SRR23310817 | MDR-TB | lineage2.2.1 | None |
ERR552603 | MDR-TB | lineage2.2.1 | None |
SRR6257053 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13285829 | MDR-TB | lineage2.2.1 | None |
ERR5865321 | Pre-XDR-TB | lineage2.2.1 | None |
SRR10380142 | MDR-TB | lineage2.2.1 | None |
SRR10147694 | MDR-TB | lineage2.2.1 | None |
SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
SRR10379940 | MDR-TB | lineage2.2.1 | None |
SRR10430360 | Pre-XDR-TB | lineage2.2.1 | None |
ERR403264 | HR-TB | lineage2.2.1 | None |
ERR5865493 | MDR-TB | lineage2.2.1 | None |
ERR11068582 | HR-TB | lineage2.2.1 | None |
ERR12916925 | XDR-TB | lineage2.2.1 | None |
ERR5864510 | MDR-TB | lineage2.2.1 | None |
ERR5864516 | MDR-TB | lineage2.2.1 | None |
SRR28498451 | XDR-TB | lineage2.2.1 | None |
ERR5865451 | MDR-TB | lineage2.2.1 | None |
SRR28498672 | MDR-TB | lineage2.2.1 | None |
ERR552401 | MDR-TB | lineage2.2.1 | None |
ERR5865941 | MDR-TB | lineage2.2.1 | None |
ERR144573 | MDR-TB | lineage2.2.1 | ru |
ERR108494 | MDR-TB | lineage2.2.1 | ru |
ERR2517087 | MDR-TB | lineage2.2.1 | gb |
ERR2516977 | MDR-TB | lineage2.2.1 | gb |
ERR2516895 | MDR-TB | lineage2.2.1 | gb |
SRR1168979 | Pre-XDR-TB | lineage2.2.1 | None |
SRR28351223 | MDR-TB | lineage2.2.1;lineage4 | None |
SRR14782638 | HR-TB | lineage2.2.1;lineage4.1.2.1 | None |
ERR10869423 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551082 | HR-TB | lineage2.2.1 | None |
ERR5865048 | MDR-TB | lineage2.2.1 | None |
ERR5866493 | XDR-TB | lineage2.2.1 | None |
ERR13284470 | MDR-TB | lineage2.2.1 | None |
SRR10303283 | Pre-XDR-TB | lineage2.2.1 | None |
ERR551645 | MDR-TB | lineage2.2.1 | None |
ERR5865492 | MDR-TB | lineage2.2.1 | None |
SRR10380143 | MDR-TB | lineage2.2.1 | None |
SRR1162995 | Pre-XDR-TB | lineage2.2.1 | None |
SRR6357004 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1163199 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552604 | MDR-TB | lineage2.2.1 | None |
ERR1063839 | MDR-TB | La2;lineage2.2 | None |
ERR7975667 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865642 | MDR-TB | lineage2.2.1 | None |
ERR11082786 | MDR-TB | lineage2.2.1 | None |
ERR552603_ERR552604 | MDR-TB | lineage2.2.1 | None |
ERR1063857 | MDR-TB | La2;lineage4.9 | None |
ERR8665755 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5866427 | MDR-TB | lineage2.2.1 | None |
SRR24710279 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10762372 | MDR-TB | lineage2.2.1 | None |
SRR29274764 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552932 | MDR-TB | lineage2.2.1 | None |
SRR1169091 | MDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
ERR5865395 | MDR-TB | lineage2.2.1 | None |
ERR5864552 | MDR-TB | lineage2.2.1 | None |
ERR5865318 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5865392 | MDR-TB | lineage2.2.1 | None |
ERR13106394 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552373 | MDR-TB | lineage2.2.1 | None |
ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
ERR5864518 | MDR-TB | lineage2.2.1 | None |
ERR11068470 | MDR-TB | lineage2.2.1 | None |
SRR28239558 | MDR-TB | lineage2.2.1 | None |
ERR5865453 | MDR-TB | lineage2.2.1 | None |
SRR24710149 | HR-TB | lineage2.2.1 | None |
ERR13284486 | MDR-TB | lineage2.2.1 | None |
ERR5865396 | MDR-TB | lineage2.2.1 | None |
SAMN02584609 | MDR-TB | lineage2.2.1 | md |
ERR551645_ERR551644 | MDR-TB | lineage2.2.1 | None |
SRR10397199 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5864551 | MDR-TB | lineage2.2.1 | None |
SRR1169005 | MDR-TB | lineage2.2.1 | None |
SRR1172320 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13232440 | HR-TB | lineage2.2.1 | None |
ERR5864513 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5864555 | Pre-XDR-TB | lineage2.2.1 | None |
ERR10762494 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13284413 | MDR-TB | lineage2.2.1 | None |
SRR23311026 | MDR-TB | lineage2.2.1 | None |
SRR28498446 | XDR-TB | lineage2.2.1 | None |
ERR7911752 | MDR-TB | lineage2.2.1 | us |
ERR7911041 | Pre-XDR-TB | lineage2.2.1 | md |
ERR7910921 | MDR-TB | lineage2.2.1 | md |
ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
SRR1159154 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5864515 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5864553 | MDR-TB | lineage2.2.1 | None |
ERR11083135 | MDR-TB | lineage2.2.1 | None |
SAMEA2533443 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534087 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534098 | MDR-TB | lineage2.2.1 | uz |
SAMEA2534893 | MDR-TB | lineage2.2.1 | uz |
SAMEA2535008 | MDR-TB | lineage2.2.1 | uz |
SRR24673509 | MDR-TB | lineage2.2.1 | None |
ERR11080861 | MDR-TB | lineage2.2.1 | None |
ERR11081843 | MDR-TB | lineage2.2.1 | None |
ERR13284869 | MDR-TB | lineage2.2.1 | None |
SRR13180309 | Pre-XDR-TB | lineage2.2.1 | None |
ERR5864511 | MDR-TB | lineage2.2.1 | None |
SRR14801845 | HR-TB | lineage2.2.1 | None |
SRR23861895 | Pre-XDR-TB | lineage2.2.1 | None |
ERR552931_ERR552932 | MDR-TB | lineage2.2.1 | None |
ERR550749_ERR550748 | MDR-TB | lineage2.2.1 | None |
ERR550748 | MDR-TB | lineage2.2.1 | None |
ERR5864509 | MDR-TB | lineage2.2.1 | None |
ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
ERR11080969 | MDR-TB | lineage2.2.1 | None |
ERR5864519 | MDR-TB | lineage2.2.1 | None |
ERR552772_ERR552771 | MDR-TB | lineage2.2.1 | None |
ERR550749 | MDR-TB | lineage2.2.1 | None |
ERR552772 | MDR-TB | lineage2.2.1 | None |
SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
ERR027454 | HR-TB | lineage2.2.1 | ru |
SRR1163446 | Pre-XDR-TB | lineage2.2.1;lineage4.1.2.1 | None |
SRR23938657 | HR-TB | lineage2.2.1 | None |
ERR551660 | MDR-TB | lineage2.2.1 | None |
ERR552910 | HR-TB | lineage2.2.1 | None |
SRR1169009 | Pre-XDR-TB | lineage2.2.1 | None |
SRR13232588 | Pre-XDR-TB | lineage2.2.1 | None |
SRR14782546 | HR-TB | lineage2.2.1 | None |
ERR11043091 | MDR-TB | lineage2.2.1 | None |
SRR28351227 | MDR-TB | lineage2.2.1;lineage4.2.1 | None |
ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
ERR550928 | MDR-TB | lineage2.2.1 | None |
SRR6356955 | MDR-TB | lineage2.2.1 | None |
ERR552771 | MDR-TB | lineage2.2.1 | None |
ERR550928_ERR550929 | MDR-TB | lineage2.2.1 | None |
ERR1559742 | MDR-TB | lineage2.2.1 | None |
ERR13284420 | MDR-TB | lineage2.2.1 | None |
ERR13276350 | MDR-TB | lineage2.2.1 | None |
ERR13292580 | MDR-TB | lineage2.2.1 | None |
SRR16088553 | MDR-TB | lineage2.2.1 | None |
ERR5866117 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13284862 | MDR-TB | lineage2.2.1 | None |
ERR4872348 | MDR-TB | lineage2.2.1 | None |
ERR5864508 | MDR-TB | lineage2.2.1 | None |
ERR5865049 | MDR-TB | lineage2.2.1 | None |
SRR5153328 | Pre-XDR-TB | lineage2.2.1 | None |
SRR24256134 | MDR-TB | lineage2.2.1 | None |
ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
SRR1163376 | Pre-XDR-TB | lineage2.2.1 | None |
ERR403308 | Pre-XDR-TB | lineage2.2.1;lineage4.3.3 | None |
ERR5865452 | MDR-TB | lineage2.2.1 | None |
ERR13285802 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1174829 | Pre-XDR-TB | lineage2.2.1 | None |
ERR13284496 | MDR-TB | lineage2.2.1 | None |
SRR1163166 | Pre-XDR-TB | lineage2.2.1 | None |
SRR1166151 | MDR-TB | lineage2.2.1 | None |
ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
ERR5864512 | Pre-XDR-TB | lineage2.2.1 | None |
ERR11080852 | MDR-TB | lineage2.2.1 | None |
SRR15901698 | MDR-TB | lineage2.2.1 | None |
SRR6256969 | MDR-TB | lineage2.2.1 | None |
SRR21798485 | HR-TB | lineage2.2.1 | None |
ERR551644 | MDR-TB | lineage2.2.1 | None |
SRR6485120 | MDR-TB | lineage2.2.1 | None |
ERR552400_ERR552401 | MDR-TB | lineage2.2.1 | None |
ERR11082199 | MDR-TB | lineage2.2.1 | None |
ERR5865643 | MDR-TB | lineage2.2.1 | None |