Rv2764c - c.-117A>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
70 Sensitive
4 RR-TB
36 HR-TB
39 MDR-TB
11 Pre-XDR-TB
0 XDR-TB
90 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 225 |
| lineage4.8 | 13 |
| lineage4.1.1;lineage4.1.2 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | 1 |
| lineage2.2.1;lineage4.1.1;lineage4.8 | 2 |
| lineage2.2.1;lineage4.1.1 | 1 |
| lineage4.1.1;lineage4.3.3 | 3 |
| lineage4.1.1;lineage4.1.2.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 250 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6866173 | Sensitive | lineage4.1.1 | None | ERR6866205 | Other | lineage4.1.1 | None | SRR23861765 | Other | lineage4.8 | None | SRR16101264 | Other | lineage4.1.1 | None | SRR17234885 | Other | lineage4.1.1 | None | SRR28394161 | Other | lineage4.1.1;lineage4.1.2 | None | SRR10808435 | Other | lineage4.1.1 | None | ERR4025114 | Sensitive | lineage4.1.1 | None | SRR16915780 | Sensitive | lineage4.1.1 | None | ERR7910847 | HR-TB | lineage4.1.1 | None | SRR14782543 | Sensitive | lineage4.8 | None | SRR29341568 | Sensitive | lineage4.1.1 | None | ERR13261900 | HR-TB | lineage4.1.1 | None | ERR4024515 | Other | lineage4.1.1 | None | ERR4812221 | Other | lineage4.1.1 | pe | ERR6866016 | Other | lineage4.1.1 | None | ERR2184306 | MDR-TB | lineage4.1.1 | pe | ERR4813373 | Sensitive | lineage4.1.1 | pe | ERR4813391 | MDR-TB | lineage4.1.1 | pe | SRR28858722 | Sensitive | lineage4.1.1 | None | SRR28044481 | HR-TB | lineage3.1.2.1 | None | SRR28393663 | MDR-TB | lineage4.1.1;lineage4.1.2.1;lineage4.3.4.2 | None | ERR4812139 | Sensitive | lineage4.1.1 | pe | ERR6866715 | Other | lineage4.1.1 | None | ERR4812340 | Other | lineage4.1.1 | pe | ERR4812451 | Other | lineage4.1.1 | pe | ERR4812588 | Other | lineage4.1.1 | pe | ERR4025111 | HR-TB | lineage4.1.1 | None | ERR2516598 | Pre-XDR-TB | lineage4.1.1 | pe | ERR2516724 | MDR-TB | lineage4.1.1 | pe | ERR2516686 | MDR-TB | lineage4.1.1 | pe | ERR2516499 | Pre-XDR-TB | lineage4.1.1 | pe | ERR2516713 | MDR-TB | lineage4.1.1 | pe | ERR2510181 | MDR-TB | lineage4.1.1 | pe | ERR2510205 | HR-TB | lineage4.1.1 | pe | ERR2184428 | Sensitive | lineage4.1.1 | pe | ERR2184444 | Sensitive | lineage4.1.1 | pe | ERR13260266 | MDR-TB | lineage4.1.1 | None | ERR6866272 | Other | lineage4.1.1 | None | ERR6866606 | MDR-TB | lineage4.1.1 | None | SRR3724983 | Other | lineage4.1.1 | pe | ERR4024948 | Sensitive | lineage4.1.1 | None | ERR4813123 | Pre-XDR-TB | lineage4.1.1 | None | SRR23310954 | Sensitive | lineage4.8 | None | ERR6865942 | Other | lineage2.2.1;lineage4.1.1;lineage4.8 | None | SRR28393922 | MDR-TB | lineage4.1.1 | None | SRR28394037 | Pre-XDR-TB | lineage4.1.1 | None | ERR6866394 | Other | lineage4.1.1 | None | ERR4811735 | Other | lineage4.1.1 | pe | SRR14782426 | Sensitive | lineage4.8 | None | ERR6865659 | HR-TB | lineage4.1.1 | None | ERR4812280 | Sensitive | lineage4.1.1 | None | ERR6865658 | HR-TB | lineage4.1.1 | None | ERR6865847 | Sensitive | lineage4.1.1 | None | ERR4024752 | Other | lineage4.1.1 | None | ERR6866262 | Sensitive | lineage4.1.1 | None | SRR28394226 | Pre-XDR-TB | lineage2.2.1;lineage4.1.1 | None | ERR4024672 | Other | lineage4.1.1 | None | SRR10808627 | Sensitive | lineage4.1.1 | None | ERR6866258 | Other | lineage4.1.1 | None | ERR6866750 | Sensitive | lineage4.1.1 | None | ERR6866982 | Other | lineage4.1.1 | None | ERR11068153 | Sensitive | lineage4.8 | None | ERR6865401 | Sensitive | lineage4.1.1 | None | SRR28498619 | Sensitive | lineage4.8 | None | ERR4024588 | Other | lineage4.1.1 | None | ERR7910848 | HR-TB | lineage4.1.1 | None | SRR10808821 | MDR-TB | lineage4.1.1 | None | ERR4024736 | Sensitive | lineage4.1.1 | None | ERR13260199 | MDR-TB | lineage4.1.1 | None | ERR6866985 | Other | lineage4.1.1 | None | SRR28394138 | MDR-TB | lineage4.1.1 | None | ERR4024879 | HR-TB | lineage4.1.1 | None | SRR10808566 | Sensitive | lineage4.1.1 | None | ERR13260667 | Pre-XDR-TB | lineage4.1.1 | None | ERR4972560 | MDR-TB | lineage4.1.1 | None | SRR10808932 | Other | lineage4.1.1 | None | ERR4811691 | Other | lineage4.1.1 | pe | SRR10808665 | Other | lineage4.1.1 | None | SRR28394069 | MDR-TB | lineage4.1.1 | None | ERR4811694 | Other | lineage4.1.1 | pe | ERR4811721 | Sensitive | lineage4.1.1 | pe | ERR6866455 | Sensitive | lineage4.1.1 | None | ERR4025026 | Sensitive | lineage4.1.1 | None | ERR2184392 | Sensitive | lineage4.1.1 | pe | SRR14782471 | Sensitive | lineage4.8 | None | ERR3287660 | HR-TB | lineage4.1.1 | pe | ERR4811917 | Other | lineage4.1.1 | pe | ERR4812062 | Other | lineage4.1.1 | pe | SRR28393310 | MDR-TB | lineage4.1.1 | None | ERR4812408 | Other | lineage4.1.1 | pe | SRR28393580 | MDR-TB | lineage4.1.1 | None | ERR4812641 | Other | lineage4.1.1 | None | ERR775308 | HR-TB | lineage4.1.1;lineage4.3.3 | pe | ERR4812381 | Other | lineage4.1.1 | pe | ERR751379 | HR-TB | lineage4.1.1 | pe | ERR4812619 | Other | lineage4.1.1 | pe | ERR4812674 | Other | lineage4.1.1 | None | ERR6865724 | Other | lineage4.1.1 | None | SRR10808573 | Sensitive | lineage4.1.1 | None | SRR14802219 | Other | lineage4.8 | None | SRR28393357 | MDR-TB | lineage4.1.1 | None | SRR10808384 | Sensitive | lineage4.1.1 | None | ERR1034790 | HR-TB | lineage4.1.1 | pe | ERR4812445 | Sensitive | lineage4.1.1;lineage4.1.2 | None | SRR10808331 | MDR-TB | lineage4.1.1 | None | SRR10808359 | RR-TB | lineage4.1.1 | None | ERR6866306 | MDR-TB | lineage4.1.1 | None | ERR4024558 | Other | lineage4.1.1 | None | ERR4024593 | Other | lineage2.2.1;lineage4.1.1;lineage4.8 | None | ERR6865590 | Other | lineage4.1.1 | None | ERR6866899 | Sensitive | lineage4.1.1 | None | ERR4813590 | HR-TB | lineage4.1.1 | None | SRR10808570 | Sensitive | lineage4.1.1 | None | ERR6865392 | Sensitive | lineage4.1.1 | None | ERR4178119 | Other | lineage4.1.1 | None | ERR4812370 | Other | lineage4.1.1 | None | ERR3287522 | MDR-TB | lineage4.1.1 | None | ERR6865736 | Other | lineage4.1.1 | None | ERR2184282 | RR-TB | lineage4.1.1 | pe | ERR2184259 | Sensitive | lineage4.1.1 | pe | ERR6865335 | Sensitive | lineage4.1.1 | None | ERR4813673 | HR-TB | lineage4.1.1 | None | ERR13260385 | RR-TB | lineage4.1.1 | None | ERR6865357 | Other | lineage4.1.1 | None | ERR6866852 | Other | lineage4.1.1 | None | ERR4024987 | Other | lineage4.1.1 | None | ERR4025138 | Other | lineage4.1.1 | None | ERR6865667 | Other | lineage4.1.1 | None | ERR6865691 | Other | lineage4.1.1 | None | ERR13260651 | Pre-XDR-TB | lineage4.1.1 | None | ERR6865344 | Other | lineage4.1.1 | None | ERR13291980 | Other | lineage4.1.1 | None | ERR4829240 | HR-TB | lineage4.1.1 | None | SRR3725704 | Sensitive | lineage4.1.1 | None | ERR6865471 | Sensitive | lineage4.1.1 | None | ERR6866264 | Sensitive | lineage4.1.1 | None | ERR4024973 | Sensitive | lineage4.1.1 | None | ERR13261638 | HR-TB | lineage4.1.1 | None | SRR28393368 | MDR-TB | lineage4.1.1 | None | ERR7910991 | MDR-TB | lineage4.1.1 | None | ERR6865489 | Other | lineage4.1.1 | None | ERR4025021 | Sensitive | lineage4.1.1 | None | SRR14782261 | Sensitive | lineage4.8 | None | ERR6865666 | Sensitive | lineage4.1.1 | None | SRR16915709 | Sensitive | lineage4.1.1 | None | ERR4811661 | Sensitive | lineage4.1.1 | pe | ERR4812214 | Other | lineage4.1.1 | pe | ERR6866956 | Sensitive | lineage4.1.1 | None | SRR10808529 | Sensitive | lineage4.1.1 | None | ERR4811783 | HR-TB | lineage4.1.1 | pe | ERR6865746 | Sensitive | lineage4.1.1 | None | ERR4813236 | Other | lineage4.1.1 | pe | ERR2184677 | MDR-TB | lineage4.1.1 | pe | ERR2184358 | Other | lineage4.1.1 | None | ERR4813426 | HR-TB | lineage4.1.1 | pe | ERR2184431 | HR-TB | lineage4.1.1 | pe | ERR2184441 | Sensitive | lineage4.1.1 | pe | ERR2184447 | Sensitive | lineage4.1.1 | pe | ERR4813384 | MDR-TB | lineage4.1.1;lineage4.3.3 | pe | ERR4813446 | HR-TB | lineage4.1.1 | pe | ERR2184577 | Other | lineage4.1.1 | pe | SRR10808587 | Sensitive | lineage4.1.1 | None | ERR6866632 | Other | lineage4.1.1 | None | ERR4813491 | Sensitive | lineage4.1.1 | None | ERR2184213 | Other | lineage4.1.1 | pe | ERR2184481 | Sensitive | lineage4.1.1 | pe | ERR3287315 | Other | lineage4.1.1 | pe | ERR4811815 | Sensitive | lineage4.1.1 | None | ERR3287624 | HR-TB | lineage4.1.1 | pe | ERR3287702 | MDR-TB | lineage4.1.1 | pe | ERR4811897 | Other | lineage4.1.1 | pe | SRR28394050 | MDR-TB | lineage4.1.1 | None | ERR4812562 | Other | lineage4.1.1 | pe | SRR28394261 | MDR-TB | lineage4.1.1 | None | ERR4812584 | Other | lineage4.1.1 | pe | ERR4812646 | Other | lineage4.1.1 | pe | ERR4812650 | Sensitive | lineage4.1.1 | None | ERR4812653 | Sensitive | lineage4.1.1 | pe | ERR3287647 | HR-TB | lineage4.1.1 | pe | ERR3287712 | Pre-XDR-TB | lineage4.1.1 | pe | ERR3287689 | HR-TB | lineage4.1.1;lineage4.1.2.1 | pe | ERR3287769 | MDR-TB | lineage4.1.1 | pe | SRR28394032 | Other | lineage4.1.1 | None | SRR28393404 | Sensitive | lineage4.1.1;lineage4.3.3 | None | SRR28394204 | MDR-TB | lineage4.1.1 | None | ERR4812879 | HR-TB | lineage4.1.1 | None | SRR22461622 | HR-TB | lineage4.1.1 | None | SRR7131158 | HR-TB | lineage4.1.1 | None | ERR4812965 | HR-TB | lineage4.1.1 | pe | SRR28393837 | Other | lineage4.1.1 | None | SRR28394217 | Pre-XDR-TB | lineage4.1.1 | None | ERR779893 | HR-TB | lineage4.1.1 | pe | ERR751352 | MDR-TB | lineage4.1.1 | pe | ERR751388 | HR-TB | lineage4.1.1 | pe | ERR751534 | MDR-TB | lineage4.1.1 | pe | ERR4813481 | Other | lineage4.1.1 | None | ERR7910995 | Pre-XDR-TB | lineage4.1.1 | pe | ERR7911013 | RR-TB | lineage4.1.1 | pe | ERR4812065 | Other | lineage4.1.1 | None | ERR6866223 | Other | lineage4.1.1 | None | ERR6866872 | Other | lineage4.1.1 | None | ERR4812448 | Other | lineage4.1.1;lineage4.1.2.1 | pe | ERR4812743 | MDR-TB | lineage4.1.1 | pe | ERR4828929 | MDR-TB | lineage4.1.1 | None | ERR4812489 | Sensitive | lineage4.1.1 | pe | ERR4812534 | Other | lineage4.1.1 | pe | ERR4812558 | Other | lineage4.1.1 | pe | ERR4812728 | Other | lineage4.1.1 | pe | ERR1023385 | Sensitive | lineage4.1.1 | None | ERR4812976 | HR-TB | lineage4.1.1 | pe | ERR4812998 | MDR-TB | lineage4.1.1 | pe | ERR4813084 | HR-TB | lineage4.1.1 | pe | ERR4813232 | Other | lineage4.1.1 | pe | SRR28394118 | Other | lineage4.1.1 | None | SRR28394179 | MDR-TB | lineage4.1.1 | None | ERR4812994 | Pre-XDR-TB | lineage4.1.1 | None | ERR6866937 | Other | lineage4.1.1 | None | SRR14782347 | Sensitive | lineage4.8 | None | SRR22461579 | MDR-TB | lineage4.1.1 | None | ERR4972496 | MDR-TB | lineage4.1.1 | None | SRR14807526 | Sensitive | lineage4.8 | None | SRR14807497 | Sensitive | lineage4.8 | None | ERR6865595 | Sensitive | lineage4.1.1 | None | ERR6866531 | Other | lineage4.1.1 | None | ERR4178209 | Other | lineage4.1.1 | None | ERR6866973 | Other | lineage4.1.1 | None | ERR4024836 | Sensitive | lineage4.1.1 | None | ERR4178185 | Other | lineage4.1.1 | None | ERR4812557 | Other | lineage4.1.1 | None | ERR4024657 | Other | lineage4.1.1 | None | ERR6866154 | Sensitive | lineage4.1.1 | None | ERR6866072 | Other | lineage4.1.1 | None | ERR6866045 | Other | lineage4.1.1 | None | ERR6866428 | HR-TB | lineage4.1.1 | None | ERR4024530 | Other | lineage4.1.1 | None | SRR14801344 | Sensitive | lineage4.8 | None | SRR28393706 | Other | lineage4.1.1 | None | SRR10808584 | HR-TB | lineage4.1.1 | None | ERR6865520 | Other | lineage4.1.1 | None | ERR13260116 | MDR-TB | lineage4.1.1 | None | ERR6866069 | Sensitive | lineage4.1.1 | None | ERR6866917 | Other | lineage4.1.1 | None | ERR4813598 | HR-TB | lineage4.1.1 | None | ERR6865466 | Other | lineage4.1.1 | None | ERR4178189 | Sensitive | lineage4.1.1 | None | ERR6866270 | Sensitive | lineage4.1.1 | None | ERR4024685 | Other | lineage4.1.1 | None | ERR4024794 | Sensitive | lineage4.1.1 | None | ERR13261947 | HR-TB | lineage4.1.1 | None |
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