Rv3244c - c.1620C>A


Drug resistance types
47 Sensitive 7 RR-TB 47 HR-TB 225 MDR-TB 17 Pre-XDR-TB 0 XDR-TB 6 Other
lineage Counts
lineage Count
lineage4.1.3 341
lineage4.1.3;lineage5.1.1 2
lineage4.1.3;lineage4.6.2.2 2
lineage1.1.3.1;lineage4.1.3 1
lineage4.1.3;lineage6.2.1 1
lineage4.1.3;lineage6.3.1 2
spoligotype Counts
spoligotype Count
None 349
Geographic prevalence
Country level data for this variant is available for 55 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3725712 MDR-TB lineage4.1.3 ci
SRR7517681 MDR-TB lineage4.1.3 ci
SRR7517792 MDR-TB lineage4.1.3 ci
SRR16058495 HR-TB lineage4.1.3 None
ERR2679268 MDR-TB lineage4.1.3 None
ERR4872137 MDR-TB lineage4.1.3 None
ERR10680036 MDR-TB lineage4.1.3 None
SRR7517790 MDR-TB lineage4.1.3 ci
ERR4423548 MDR-TB lineage4.1.3 None
SRR998823 MDR-TB lineage4.1.3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR998766 MDR-TB lineage4.1.3 None
SRR998757 MDR-TB lineage4.1.3 None
SRR11461690 MDR-TB lineage4.1.3 None
ERR234198 Sensitive lineage4.1.3 None
SRR11444403 Sensitive lineage4.1.3 None
SRR23252658 MDR-TB lineage4.1.3 None
SRR998730 Sensitive lineage4.1.3 None
ERR4821377 HR-TB lineage4.1.3 gb
SRR998793 MDR-TB lineage4.1.3 None
SRR026443 MDR-TB lineage4.1.3 None
ERR4407537 Sensitive lineage4.1.3 None
SRR998797 MDR-TB lineage4.1.3 None
ERR047887 MDR-TB lineage4.1.3 None
SRR998745 MDR-TB lineage4.1.3 None
SRR998731 Sensitive lineage4.1.3 None
ERR4828916 MDR-TB lineage4.1.3 None
SRR11444304 HR-TB lineage4.1.3 None
SAMN02231156 MDR-TB lineage4.1.3 None
SRR3725718 MDR-TB lineage4.1.3 ci
SRR998842 MDR-TB lineage4.1.3 None
SRR11444031 Sensitive lineage4.1.3 None
ERR4817479 Other lineage4.1.3 None
ERR2514497 Sensitive lineage4.1.3 gb
SRR1162480 Pre-XDR-TB lineage4.1.3 None
SRR998837 MDR-TB lineage4.1.3 None
SRR998764 HR-TB lineage4.1.3 None
ERR2679284 MDR-TB lineage4.1.3 None
SRR2100065 HR-TB lineage4.1.3 None
ERR9030305 MDR-TB lineage4.1.3 None
SRR998831 MDR-TB lineage4.1.3 None
SRR023476 HR-TB lineage4.1.3 None
SRR1145859 MDR-TB lineage4.1.3 None
SRR3732647 MDR-TB lineage4.1.3 None
ERR4423591 Other lineage4.1.3 None
ERR11082308 MDR-TB lineage4.1.3 None
ERR8774490 MDR-TB lineage4.1.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR998803 MDR-TB lineage4.1.3;lineage5.1.1 None
ERR2864270 MDR-TB lineage4.1.3 None
SRR998824 MDR-TB lineage4.1.3 None
ERR4829980 MDR-TB lineage4.1.3 None
SRR998800 MDR-TB lineage4.1.3;lineage4.6.2.2 None
SRR998733 Sensitive lineage4.1.3 None
SRR11443991 MDR-TB lineage4.1.3 None
SRR1049970 Pre-XDR-TB lineage4.1.3 None
ERR8774492 MDR-TB lineage4.1.3 None
ERR2679262 MDR-TB lineage4.1.3 None
SAMN02231159 MDR-TB lineage4.1.3 None
SRR998747 MDR-TB lineage4.1.3 None
SRR1049975 MDR-TB lineage4.1.3 None
ERR4816120 MDR-TB lineage4.1.3 None
SRR11444081 Sensitive lineage4.1.3 None
SAMN02231161 Pre-XDR-TB lineage4.1.3 ml
ERR4829691 MDR-TB lineage4.1.3 it
ERR552466 Sensitive lineage4.1.3 None
ERR10680022 MDR-TB lineage4.1.3 None
ERR2514564 HR-TB lineage4.1.3 gb
SRR5535684 HR-TB lineage4.1.3 None
SRR998732 Sensitive lineage4.1.3 None
ERR1952138 MDR-TB lineage4.1.3 ie
SRR5535687 MDR-TB lineage4.1.3 None
SRR998679 RR-TB lineage4.1.3 None
ERR9119616 RR-TB lineage4.1.3 None
SRR3724965 MDR-TB lineage4.1.3 ci
SRR5535774 MDR-TB lineage4.1.3 None
SRR998812 MDR-TB lineage4.1.3 None
SRR998729 Sensitive lineage4.1.3 None
SRR998834 MDR-TB lineage4.1.3 None
SRR3725719 MDR-TB lineage4.1.3 ci
ERR2516542 MDR-TB lineage4.1.3 nl
ERR2516714 MDR-TB lineage4.1.3 nl
SRR1049967 Sensitive lineage4.1.3 ml
SRR998840 MDR-TB lineage4.1.3 None
SRR7517807 MDR-TB lineage4.1.3 None
SRR11444380 Sensitive lineage4.1.3 None
ERR11082415 MDR-TB lineage4.1.3 None
ERR4829008 MDR-TB lineage4.1.3 None
SAMN02231154 Pre-XDR-TB lineage4.1.3 ml
ERR2679315 Sensitive lineage4.1.3 None
SRR1577811 MDR-TB lineage4.1.3 None
SRR21689723 HR-TB lineage4.1.3 None
ERR4423557 HR-TB lineage4.1.3 None
SRR998770 MDR-TB lineage4.1.3 None
ERR2679247 RR-TB lineage4.1.3 None
ERR11068129 HR-TB lineage4.1.3 None
SRR3724819 MDR-TB lineage4.1.3 None
ERR4423770 MDR-TB lineage4.1.3 None
SRR1049963 RR-TB lineage4.1.3 None
SRR998738 Sensitive lineage4.1.3 None
ERR11082331 HR-TB lineage4.1.3 None
SRR21675940 MDR-TB lineage4.1.3 None
SRR998748 Pre-XDR-TB lineage4.1.3 None
SRR1162763 MDR-TB lineage4.1.3 None
SRR998773 Pre-XDR-TB lineage4.1.3 None
ERR550698 HR-TB lineage4.1.3 de
SRR7517794 MDR-TB lineage4.1.3 ci
SRR7517733 MDR-TB lineage4.1.3 None
SRR998829 MDR-TB lineage4.1.3 None
ERR10680040 MDR-TB lineage4.1.3 None
ERR8774127 MDR-TB lineage4.1.3 None
SRR998846 MDR-TB lineage4.1.3 None
SRR21727727 Other lineage4.1.3 None
ERR028365 Sensitive lineage4.1.3 None
ERR2516344 MDR-TB lineage4.1.3 be
SRR3724791 MDR-TB lineage4.1.3 None
SRR998847 MDR-TB lineage4.1.3 None
ERR11080823 Sensitive lineage4.1.3 None
ERR11049741 MDR-TB lineage4.1.3 None
ERR047889 MDR-TB lineage4.1.3 None
ERR10680025 MDR-TB lineage4.1.3 None
ERR2679269 MDR-TB lineage4.1.3 None
SAMN02231160 MDR-TB lineage4.1.3 None
SRR998784 MDR-TB lineage4.1.3 None
ERR12554784 Sensitive lineage4.1.3 None
ERR4423540 MDR-TB lineage4.1.3 None
SRR1162482 MDR-TB lineage4.1.3 None
SRR998799 MDR-TB lineage4.1.3 None
ERR4423593 Sensitive lineage4.1.3 None
SRR3725722 MDR-TB lineage4.1.3 ci
ERR552432 MDR-TB lineage4.1.3 cg
SRR6511614 MDR-TB lineage4.1.3 None
SRR1162468 MDR-TB lineage4.1.3 None
SRR3724662 MDR-TB lineage4.1.3 ci
ERR3806848 HR-TB lineage4.1.3 None
SRR7517788 MDR-TB lineage4.1.3 ci
SRR5535691 MDR-TB lineage4.1.3 None
SRR3725703 MDR-TB lineage4.1.3 None
SRR998756 MDR-TB lineage4.1.3 None
SAMN02231164 MDR-TB lineage4.1.3 None
SAMN02231145 Sensitive lineage4.1.3 ml
SRR998767 MDR-TB lineage4.1.3 None
ERR10680222 MDR-TB lineage4.1.3 None
SAMN02231186 MDR-TB lineage4.1.3 None
SRR21690384 Other lineage4.1.3 None
ERR11049437 HR-TB lineage4.1.3 None
SRR11444383 MDR-TB lineage4.1.3 None
ERR4423539 HR-TB lineage4.1.3 None
SRR11444211 HR-TB lineage4.1.3 None
SRR998822 MDR-TB lineage4.1.3 None
ERR4828982 MDR-TB lineage4.1.3 it
ERR4423596 MDR-TB lineage4.1.3 None
ERR4821432 HR-TB lineage1.1.3.1;lineage4.1.3 None
SAMN02231148 Sensitive lineage4.1.3 None
ERR11043475 MDR-TB lineage4.1.3 None
SAMN02231181 MDR-TB lineage4.1.3 ml
SRR16100243 HR-TB lineage4.1.3 None
SRR3725693 MDR-TB lineage4.1.3 None
SRR998830 MDR-TB lineage4.1.3 None
ERR047888 MDR-TB lineage4.1.3 None
SRR998844 MDR-TB lineage4.1.3 None
ERR502504 HR-TB lineage4.1.3;lineage6.2.1 None
SRR998796 MDR-TB lineage4.1.3 None
SRR1145855 Sensitive lineage4.1.3 None
SRR998802 MDR-TB lineage4.1.3;lineage5.1.1 None
SRR998809 MDR-TB lineage4.1.3 None
ERR4423600 HR-TB lineage4.1.3 None
SRR3732698 Sensitive lineage4.1.3 ci
ERR047882 MDR-TB lineage4.1.3 None
ERR552431 MDR-TB lineage4.1.3 cg
SRR7781503 MDR-TB lineage4.1.3 None
SRR998769 MDR-TB lineage4.1.3 None
SRR998814 MDR-TB lineage4.1.3 None
ERR4423523 MDR-TB lineage4.1.3 None
SRR998795 MDR-TB lineage4.1.3 None
SRR11444317 HR-TB lineage4.1.3 None
SRR998749 Pre-XDR-TB lineage4.1.3 None
SRR998774 Pre-XDR-TB lineage4.1.3 None
ERR2679314 MDR-TB lineage4.1.3 None
SRR3724956 MDR-TB lineage4.1.3 None
ERR9124956 HR-TB lineage4.1.3 None
ERR9786979 Sensitive lineage4.1.3 None
SRR998787 MDR-TB lineage4.1.3 None
SRR998744 MDR-TB lineage4.1.3 None
ERR10680158 MDR-TB lineage4.1.3 None
ERR4423489 Pre-XDR-TB lineage4.1.3 None
SRR11444089 HR-TB lineage4.1.3 None
SRR1577821 MDR-TB lineage4.1.3 None
ERR11082587 MDR-TB lineage4.1.3 None
ERR4818816 MDR-TB lineage4.1.3 gb
ERR4828894 MDR-TB lineage4.1.3 None
ERR553332 HR-TB lineage4.1.3 de
SRR1049968 Pre-XDR-TB lineage4.1.3 ml
SRR5535723 MDR-TB lineage4.1.3 None
SAMN02231185 MDR-TB lineage4.1.3 ml
SRR1145851 MDR-TB lineage4.1.3 None
ERR11050363 Sensitive lineage4.1.3 None
SRR11444260 Sensitive lineage4.1.3 None
ERR4815780 MDR-TB lineage4.1.3 None
SAMN02231155 MDR-TB lineage4.1.3 None
ERR11082803 Sensitive lineage4.1.3 None
SRR1103381 MDR-TB lineage4.1.3 None
ERR047885 MDR-TB lineage4.1.3 gb
SRR11444288 Sensitive lineage4.1.3 None
ERR11082135 MDR-TB lineage4.1.3 None
SRR3724802 MDR-TB lineage4.1.3 None
ERR9899670 Sensitive lineage4.1.3 None
ERR9119506 RR-TB lineage4.1.3 None
ERR4872136 MDR-TB lineage4.1.3 None
SRR998815 MDR-TB lineage4.1.3 None
SRR16370440 MDR-TB lineage4.1.3 None
ERR4423595 MDR-TB lineage4.1.3 None
SRR998810 MDR-TB lineage4.1.3 None
SRR21710726 HR-TB lineage4.1.3 None
ERR11043574 HR-TB lineage4.1.3 None
ERR4818662 MDR-TB lineage4.1.3 None
ERR11049061 Other lineage4.1.3 None
ERR4829435 MDR-TB lineage4.1.3 it
SRR7069949 HR-TB lineage4.1.3 None
SRR998839 MDR-TB lineage4.1.3 None
SRR998792 MDR-TB lineage4.1.3 None
SRR11444241 HR-TB lineage4.1.3 None
ERR4423558 HR-TB lineage4.1.3 None
SRR998811 MDR-TB lineage4.1.3 None
SRR998833 MDR-TB lineage4.1.3 None
SRR3732646 MDR-TB lineage4.1.3 None
SRR998759 MDR-TB lineage4.1.3 None
SRR998801 MDR-TB lineage4.1.3;lineage4.6.2.2 None
ERR9786910 HR-TB lineage4.1.3 None
SRR998728 Sensitive lineage4.1.3 None
SRR3724807 MDR-TB lineage4.1.3 ci
ERR2679273 MDR-TB lineage4.1.3 None
SRR11444129 Sensitive lineage4.1.3 None
SRR998768 MDR-TB lineage4.1.3 None
SAMN02231172 MDR-TB lineage4.1.3 None
SRR5535708 MDR-TB lineage4.1.3 None
SAMN02231173 MDR-TB lineage4.1.3 None
SRR26112285 MDR-TB lineage4.1.3 None
ERR8774125 HR-TB lineage4.1.3 None
SRR998845 MDR-TB lineage4.1.3 None
SRR1103500 MDR-TB lineage4.1.3 None
SRR11444384 Sensitive lineage4.1.3 None
ERR9030410 MDR-TB lineage4.1.3 None
ERR4423636 MDR-TB lineage4.1.3 None
ERR552467 Sensitive lineage4.1.3 None
SRR3724928 MDR-TB lineage4.1.3 ci
SRR998739 Sensitive lineage4.1.3 None
SAMN02231183 MDR-TB lineage4.1.3 None
SRR11461699 Sensitive lineage4.1.3 None
ERR4817581 HR-TB lineage4.1.3 gb
SRR998688 Sensitive lineage4.1.3 None
ERR10680106 MDR-TB lineage4.1.3 None
SRR11444341 Sensitive lineage4.1.3 None
ERR11081053 MDR-TB lineage4.1.3 None
ERR11067446 HR-TB lineage4.1.3 None
ERR2513998 HR-TB lineage4.1.3 gb
SRR998771 MDR-TB lineage4.1.3 None
ERR10680078 MDR-TB lineage4.1.3 None
SRR1162475 MDR-TB lineage4.1.3 None
ERR552858 HR-TB lineage4.1.3 de
SRR998838 MDR-TB lineage4.1.3 None
ERR2516255 MDR-TB lineage4.1.3 be
SRR998832 MDR-TB lineage4.1.3 None
ERR2516657 Pre-XDR-TB lineage4.1.3 nl
ERR9901818 HR-TB lineage4.1.3 None
SRR998765 MDR-TB lineage4.1.3 None
ERR4423484 MDR-TB lineage4.1.3 None
SRR1103621 Pre-XDR-TB lineage4.1.3 None
SRR998786 MDR-TB lineage4.1.3 None
ERR028357 HR-TB lineage4.1.3 None
SRR998755 MDR-TB lineage4.1.3 None
SRR7781511 MDR-TB lineage4.1.3 None
SRR1577824 MDR-TB lineage4.1.3 None
ERR10680118 MDR-TB lineage4.1.3 None
SRR998841 MDR-TB lineage4.1.3 None
SRR3724971 MDR-TB lineage4.1.3 None
ERR11049264 MDR-TB lineage4.1.3 None
ERR4872100 RR-TB lineage4.1.3 None
ERR047890 MDR-TB lineage4.1.3 None
SRR998736 Sensitive lineage4.1.3 None
ERR2200071 HR-TB lineage4.1.3 de
ERR2679313 Sensitive lineage4.1.3 None
SRR998848 MDR-TB lineage4.1.3 None
SRR998836 MDR-TB lineage4.1.3 None
SRR7517789 MDR-TB lineage4.1.3 ci
SRR18913757 Sensitive lineage4.1.3 None
ERR4821488 Sensitive lineage4.1.3 None
SAMN02231187 MDR-TB lineage4.1.3 None
ERR2679263 MDR-TB lineage4.1.3 None
SRR1049972 MDR-TB lineage4.1.3 ml
SAMN02231153 Pre-XDR-TB lineage4.1.3 None
SAMN02231179 MDR-TB lineage4.1.3 None
ERR11067910 MDR-TB lineage4.1.3 None
ERR4423599 HR-TB lineage4.1.3 None
ERR4822280 Other lineage4.1.3 None
ERR10680193 MDR-TB lineage4.1.3 None
SRR998754 MDR-TB lineage4.1.3 None
ERR8774231 Pre-XDR-TB lineage4.1.3 None
SRR1162773 Pre-XDR-TB lineage4.1.3 None
SRR998835 MDR-TB lineage4.1.3 None
SRR11444164 Sensitive lineage4.1.3 None
ERR2516606 MDR-TB lineage4.1.3 nl
SRR998821 MDR-TB lineage4.1.3 None
SRR1103486 MDR-TB lineage4.1.3 None
SRR998734 Sensitive lineage4.1.3 None
ERR9786998 HR-TB lineage4.1.3 None
ERR4829014 MDR-TB lineage4.1.3 it
SRR3725708 MDR-TB lineage4.1.3 ci
ERR11082668 Pre-XDR-TB lineage4.1.3 None
ERR2516850 MDR-TB lineage4.1.3 gb
SAMN02231190 MDR-TB lineage4.1.3 ml
SRR998741 MDR-TB lineage4.1.3;lineage6.3.1 None
SRR998794 MDR-TB lineage4.1.3 None
SRR998752 MDR-TB lineage4.1.3 None
SRR1162694 MDR-TB lineage4.1.3 None
SRR1162775 MDR-TB lineage4.1.3 None
SAMN02231175 MDR-TB lineage4.1.3 ml
ERR4821128 MDR-TB lineage4.1.3 None
SRR998753 MDR-TB lineage4.1.3 None
SRR998785 MDR-TB lineage4.1.3 None
ERR11067818 MDR-TB lineage4.1.3 None
SRR998758 MDR-TB lineage4.1.3 None
SRR7517793 MDR-TB lineage4.1.3 ci
SRR1049966 Sensitive lineage4.1.3 None
ERR10680159 MDR-TB lineage4.1.3 None
ERR4819728 MDR-TB lineage4.1.3 None
SRR1577829 MDR-TB lineage4.1.3 None
ERR4423597 HR-TB lineage4.1.3 None
SAMN02231180 MDR-TB lineage4.1.3 None
SRR1577823 MDR-TB lineage4.1.3 None
SRR998742 MDR-TB lineage4.1.3;lineage6.3.1 None
SRR16370456 MDR-TB lineage4.1.3 None
ERR11043448 HR-TB lineage4.1.3 None
ERR4872222 RR-TB lineage4.1.3 None
SRR3724803 MDR-TB lineage4.1.3 ci
SRR998751 Pre-XDR-TB lineage4.1.3 None
ERR4423769 MDR-TB lineage4.1.3 None
ERR234201 HR-TB lineage4.1.3 gh
SRR7517808 MDR-TB lineage4.1.3 None
SRR998735 Sensitive lineage4.1.3 None
SRR998816 MDR-TB lineage4.1.3 None
SRR998798 MDR-TB lineage4.1.3 None
ERR9901095 HR-TB lineage4.1.3 None
ERR2516489 MDR-TB lineage4.1.3 nl
ERR11067754 MDR-TB lineage4.1.3 None
SRR998813 MDR-TB lineage4.1.3 None
ERR11050442 Sensitive lineage4.1.3 None
SRR998843 MDR-TB lineage4.1.3 None
SRR998746 MDR-TB lineage4.1.3 None