Rv3261 - c.-171A>G


Drug resistance types
100 Sensitive 4 RR-TB 23 HR-TB 57 MDR-TB 49 Pre-XDR-TB 2 XDR-TB 14 Other
lineage Counts
lineage Count
lineage2.2.1 122
lineage4.6.1.2 4
lineage3 5
lineage2.2.2 14
lineage4.2.2 2
lineage2.2.1.1 8
lineage1.1.2 14
lineage1.1.1.1 5
lineage4.3.3 4
lineage4.3.2 2
lineage6.1.1 2
La3;M.canetti;lineage2.2.1 1
lineage3.1.1 1
lineage1.2.2.2 4
lineage4.1.2.1 11
lineage2.1 3
lineage1.1.1 5
lineage4.1.1.3 5
lineage2.2.1.2 1
lineage4.2.1 2
lineage4.1.2 2
lineage4.4.1.1 2
lineage1.1.1.1;lineage2.2.1 1
lineage4 1
lineage2.2.1;lineage4 1
lineage1.2.2.1 1
lineage4.4.2 2
lineage4.5 3
lineage1.1.3.2 3
lineage4.6.1.1 1
lineage2.2.1;lineage4.9 1
lineage1.2.1.2.1 2
lineage2.2.1;lineage4.3.3 1
lineage4.2.2.2 1
lineage1.1.3.1 5
lineage1.1 1
lineage4.8 1
lineage1.1.3 1
lineage4.6.2.2 2
La1.7.1 1
lineage1.2.2 1
spoligotype Counts
spoligotype Count
None 249
Geographic prevalence
Country level data for this variant is available for 59 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4799218 Pre-XDR-TB lineage2.2.1 in
ERR6358933 MDR-TB lineage4.6.1.2 None
SRR6397331 HR-TB lineage3 ca
ERR8665713 Pre-XDR-TB lineage2.2.1 None
SRR1013651 Pre-XDR-TB lineage2.2.2 None
ERR7911106 MDR-TB lineage2.2.1 vn
SRR15368713 Sensitive lineage4.2.2 None
SRR21277552 Other lineage2.2.1.1 None
SRR26400092 Sensitive lineage2.2.1 None
SRR28046187 Sensitive lineage1.1.2 None
ERR551740 MDR-TB lineage2.2.1 None
SRR5073570 Sensitive lineage1.1.1.1 vn
SRR28240083 Sensitive lineage4.3.3 None
ERR8975366 Sensitive lineage2.2.1 None
SRR15723251 Other lineage2.2.1 None
SRR1368336 Pre-XDR-TB lineage2.2.1 None
SRR15600344 MDR-TB lineage2.2.1.1 None
ERR1035350 MDR-TB lineage4.3.2 br
ERR9787377 Sensitive lineage6.1.1 None
SRR3742670 Pre-XDR-TB lineage2.2.1 None
ERR4195671 Pre-XDR-TB lineage2.2.2 None
SRR16058486 Sensitive lineage1.1.2 None
ERR11138628 MDR-TB lineage2.2.1 None
SAMN02360604 Pre-XDR-TB lineage2.2.2 kr
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR24673558 Sensitive lineage4.3.3 None
ERR7737870 MDR-TB lineage3.1.1 None
SRR2024917 Pre-XDR-TB lineage2.2.1 cn
SRR25206919 MDR-TB lineage2.2.1 None
ERR123908 Sensitive lineage1.2.2.2 None
SRR16370622 Sensitive lineage4.1.2.1 None
SRR10808754 Sensitive lineage1.2.2.2 None
SRR12420542 Sensitive lineage2.2.1 None
SRR11715720 Pre-XDR-TB lineage2.1 None
SRR11662608 MDR-TB lineage2.2.1 None
ERR538432 Sensitive lineage2.1 None
SRR20969788 HR-TB lineage2.2.1 None
ERR752079 Sensitive lineage1.1.1 th
SRR11662256 MDR-TB lineage2.2.1 None
SRR3055243 MDR-TB lineage2.2.1 None
SRR1144725 Pre-XDR-TB lineage2.2.2 None
ERR11488963 Pre-XDR-TB lineage4.1.1.3 None
SRR413228 MDR-TB lineage2.2.1 None
ERR4828518 HR-TB lineage2.2.1 None
ERR2516452 Sensitive lineage4.3.2 pe
SRR21276972 Sensitive lineage2.2.1 None
ERR3639768 MDR-TB lineage2.2.1 None
ERR4831008 Pre-XDR-TB lineage2.2.1.2 np
SRR1049046 Pre-XDR-TB lineage2.2.2 None
SRR3085262 MDR-TB lineage4.2.1 None
ERR551133_ERR551132 MDR-TB lineage2.2.1 None
ERR4403838 Sensitive lineage2.2.1 None
ERR9125826 Sensitive lineage2.2.1 None
SRR1048854 Pre-XDR-TB lineage2.2.2 None
ERR768010 Sensitive lineage1.1.1 th
SRR26400082 Other lineage2.2.1 None
SRR22251208 Sensitive lineage2.2.1 None
ERR11488922 Pre-XDR-TB lineage4.1.1.3 None
ERR11488857 Pre-XDR-TB lineage4.1.1.3 None
ERR8665712 Pre-XDR-TB lineage2.2.1 None
SRR10808488 Sensitive lineage4.1.2 None
SRR1368335 Pre-XDR-TB lineage2.2.1 None
ERR5865671 Pre-XDR-TB lineage2.2.1 None
SRR2024941 Pre-XDR-TB lineage2.2.1 cn
ERR3275584 HR-TB lineage2.2.1 nl
ERR4797142 Sensitive lineage1.2.2.2 in
ERR2653063 Pre-XDR-TB lineage4.4.1.1 None
SRR26399390 HR-TB lineage1.1.1.1 None
SRR20969480 MDR-TB lineage2.2.1 None
ERR11043074 Pre-XDR-TB lineage2.2.1 None
ERR3802156 Sensitive lineage6.1.1 None
SRR1368333 Pre-XDR-TB lineage2.2.1 None
SRR1013556 Pre-XDR-TB lineage2.2.2 None
ERR4831104 Pre-XDR-TB lineage2.2.1 None
SRR15723257 Sensitive lineage2.2.1 None
SRR2100692 Sensitive lineage1.1.2 None
ERR2184517 Sensitive lineage4.1.2 pe
ERR4820976 Sensitive lineage2.2.1 gb
SRR125288 Sensitive lineage1.1.1.1;lineage2.2.1 None
SRR28393862 Sensitive lineage4 None
SRR28351613 MDR-TB lineage2.2.1;lineage4 None
ERR11252611 Sensitive lineage1.2.2.1 None
SRR27069417 Pre-XDR-TB lineage2.2.1 None
SRR28706491 MDR-TB lineage2.2.1 None
SRR25514945 Sensitive lineage2.2.1 None
SRR27069432 MDR-TB lineage2.2.1 None
SRR23310834 HR-TB lineage2.2.1 None
SRR25206947 MDR-TB lineage4.4.2 None
SRR6397779 HR-TB lineage3 ca
SRR14802082 HR-TB lineage2.2.1 None
ERR8665863 Pre-XDR-TB lineage2.2.1 None
ERR4810647 HR-TB lineage4.5 cn
ERR9125849 Sensitive lineage1.1.2 None
ERR230067 Sensitive lineage1.1.2 None
ERR9993126 XDR-TB lineage2.2.2 None
SRR21887765 Pre-XDR-TB lineage2.2.1 None
SRR15316410 HR-TB lineage2.2.1 None
ERR212136 Sensitive lineage1.1.3.2 mw
ERR6358836 Sensitive lineage4.6.1.1 None
SRR21031693 MDR-TB lineage2.2.1 None
SRR6650318 Sensitive lineage2.2.1 None
ERR551133 MDR-TB lineage2.2.1 None
SRR26937091 MDR-TB lineage2.2.1;lineage4.9 None
ERR4829017 HR-TB lineage4.1.2.1 None
ERR1352307 Sensitive lineage2.2.1 cn
DRR473910 Sensitive lineage1.2.1.2.1 None
SRR2100390 MDR-TB lineage2.2.1 None
SRR15014633 MDR-TB lineage1.1.2 None
SRR20969948 Sensitive lineage2.2.1 None
SRR1013650 Pre-XDR-TB lineage2.2.2 None
SAMN02398716 Pre-XDR-TB lineage2.2.2 kr
ERR6358756 MDR-TB lineage4.6.1.2 None
SRR11662647 MDR-TB lineage2.2.1 None
SRR14801988 MDR-TB lineage2.2.1;lineage4.3.3 None
SRR12420681 Sensitive lineage2.2.1 None
SRR19276639 HR-TB lineage4.3.3 None
SRR21277279 Pre-XDR-TB lineage2.2.1 None
SRR1723750 Other lineage2.2.1 None
SRR15600397 MDR-TB lineage2.2.1.1 None
SRR14802003 MDR-TB lineage2.2.1 None
DRR130062 RR-TB lineage2.2.1 None
ERR3639804 Pre-XDR-TB lineage2.2.1 None
ERR8975388 Other lineage2.2.1 None
SRR1013555 Pre-XDR-TB lineage2.2.2 None
SRR12882457 Sensitive lineage1.1.2 None
SRR21689924 Sensitive lineage2.2.1 None
ERR11243579 MDR-TB lineage2.2.1 None
ERR7737806 MDR-TB lineage4.2.2.2 None
SAMEA2533724 MDR-TB lineage2.2.1 uz
SRR1368332 Pre-XDR-TB lineage2.2.1 None
ERR4811653 Sensitive lineage2.2.1 cn
SRR14801971 Sensitive lineage2.2.1 None
SRR12199461 Sensitive lineage1.1.3.1 None
ERR4811211 Sensitive lineage2.2.1 cn
SRR22424878 HR-TB lineage1.1.2 None
SRR26112424 Sensitive lineage1.1.3.1 None
SRR16057943 Sensitive lineage2.2.1 None
ERR718288 HR-TB lineage1.1 th
SRR1723824 HR-TB lineage2.2.1 cn
SRR25515255 Other lineage2.2.1 None
ERR4828908 MDR-TB lineage4.8 None
ERR4799374 Sensitive lineage1.1.2 in
SRR3742656 Pre-XDR-TB lineage2.2.1 None
ERR4811300 MDR-TB lineage4.4.2 cn
ERR12328171 Sensitive lineage1.1.1 None
SRR13180251 MDR-TB lineage4.3.3 None
ERR114488 MDR-TB lineage2.2.1 None
SRR6797568 Sensitive lineage2.2.1 None
ERR551859 Other lineage4.4.1.1 de
ERR1352308 Sensitive lineage2.2.1 cn
SRR3742655 Pre-XDR-TB lineage2.2.1 None
ERR4800522 Sensitive lineage1.1.3 in
SAMEA2535200 MDR-TB lineage2.2.1 uz
DRR261179 Sensitive lineage1.1.1.1 None
SRR2100150 Sensitive lineage1.2.2.2 None
ERR7737865 MDR-TB lineage2.2.1 None
ERR2517301 HR-TB lineage2.2.1 nl
ERR4811250 Sensitive lineage2.2.1 cn
SRR21576614 MDR-TB lineage4.5 None
ERR751859 Sensitive lineage1.2.1.2.1 th
ERR3273162 MDR-TB lineage1.1.3.2 None
ERR234115 MDR-TB lineage2.2.1 cn
ERR6866435 Sensitive lineage4.1.2.1 None
ERR5865672 Pre-XDR-TB lineage2.2.1 None
SRR14164409 Sensitive lineage4.1.2.1 None
ERR2517105 Sensitive lineage2.2.1 gb
SRR10040323 MDR-TB lineage2.2.1 None
SRR413229 MDR-TB lineage2.2.1 None
ERR4820571 HR-TB lineage3 None
SRR28351189 MDR-TB lineage2.2.1 None
ERR11775519 RR-TB lineage2.2.1 None
SRR28044301 Sensitive lineage1.1.2 None
ERR4829144 Pre-XDR-TB lineage3 pk
SRR5074136 Sensitive lineage2.1 vn
SRR6797282 Other lineage2.2.1 None
SRR5065253 Other lineage2.2.1 vn
ERR11044637 Sensitive lineage4.6.2.2 None
ERR4811071 Sensitive lineage2.2.1 cn
ERR11082147 MDR-TB lineage2.2.1 None
SRR6982179 Sensitive lineage4.1.1.3 None
SRR413231 MDR-TB lineage2.2.1 None
SRR413232 HR-TB lineage2.2.1 None
SRR2101500 Sensitive lineage4.1.1.3 None
SAMN02360557 Pre-XDR-TB lineage2.2.2 kr
SRR14165133 Sensitive lineage4.1.2.1 None
ERR4798738 XDR-TB lineage2.2.1 in
ERR9286150 Sensitive lineage4.6.1.2 None
SRR19317520 Sensitive lineage4.1.2.1 None
SRR15316530 Sensitive lineage2.2.1 None
ERR4799896 Sensitive lineage1.1.2 in
SRR21277661 Sensitive lineage2.2.1 None
SRR18213906 Sensitive lineage1.1.2 None
SRR10808786 Sensitive lineage2.2.1 None
SRR12420362 Pre-XDR-TB lineage2.2.1 None
ERR11044556 Sensitive lineage4.1.2.1 None
SRR26399842 MDR-TB lineage2.2.1 None
ERR1352310 Sensitive lineage2.2.1 cn
SRR24083639 Sensitive lineage2.2.1 None
SRR6257047 Pre-XDR-TB lineage2.2.1 None
ERR7975671 MDR-TB lineage2.2.1 None
SRR5065469 Other lineage2.2.1.1 vn
ERR2446475 HR-TB lineage2.2.1 nl
SRR10869115 Sensitive lineage2.2.1.1 None
ERR234104 Sensitive lineage2.2.1 None
ERR1352309 Sensitive lineage2.2.1 cn
SRR5073969 Sensitive lineage1.1.1 vn
SRR12931748 Sensitive lineage4.1.2.1 None
SRR11461657 Sensitive lineage4.6.2.2 None
ERR4811007 Sensitive lineage4.2.2 cn
ERR11068141 Sensitive lineage1.1.2 None
SRR14165124 Sensitive lineage4.1.2.1 None
ERR6358723 MDR-TB lineage4.6.1.2 None
SRR5073879 Sensitive lineage2.2.1 vn
SRR3086354 MDR-TB lineage4.2.1 None
SRR12420292 Sensitive lineage2.2.1 None
SRR26399654 HR-TB lineage2.2.1.1 None
SRR413266 MDR-TB lineage2.2.1 None
SRR1049047 Pre-XDR-TB lineage2.2.2 None
SRR2100335 MDR-TB lineage2.2.1 None
ERR11083022 Sensitive lineage4.1.2.1 None
SRR3742669 Pre-XDR-TB lineage2.2.1 None
SRR21576699 Pre-XDR-TB lineage2.2.1 None
ERR751803 HR-TB lineage1.1.1 th
SRR6797629 Other lineage1.1.3.1 None
SRR6797333 Sensitive lineage2.2.1 None
ERR9634289 MDR-TB lineage1.1.3.2 None
SRR26400094 Sensitive lineage2.2.1 None
SRR1368334 Pre-XDR-TB lineage2.2.1 None
SRR18495625 Other lineage2.2.1 None
SRR6650287 Sensitive lineage1.1.3.1 None
DRR185000 Other lineage1.1.1.1 None
ERR4797278 Pre-XDR-TB lineage2.2.1 in
ERR4828681 Sensitive lineage1.1.1.1 vn
ERR2515647 RR-TB lineage2.2.1.1 za
ERR4818055 HR-TB lineage1.1.2 gb
ERR3273136 MDR-TB lineage2.2.2 None
SRR26800484 Sensitive lineage3 None
ERR4011073 Pre-XDR-TB lineage2.2.1 None
ERR553192_ERR553191 MDR-TB lineage2.2.1 None
ERR9121602 Sensitive lineage4.1.2.1 None
SRR6650365 Sensitive lineage2.2.1 None
SRR23961498 Other La1.7.1 None
SRR671781 Pre-XDR-TB lineage2.2.1 cn
ERR4811064 Sensitive lineage4.5 cn
SRR15014621 RR-TB lineage1.2.2 None
DRR188784 HR-TB lineage2.2.1 None
SRR6797408 Sensitive lineage1.1.3.1 None
SRR5073777 Sensitive lineage2.2.1 vn
SRR20969360 MDR-TB lineage2.2.1.1 None