Rv3261 - c.-171A>G
Drug resistance types
111 Sensitive
5 RR-TB
27 HR-TB
68 MDR-TB
55 Pre-XDR-TB
2 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 14 |
| lineage2.2.2 | 18 |
| lineage4.3.3 | 4 |
| lineage1.1.3.1 | 8 |
| lineage2.2.1 | 139 |
| lineage4.4.1.1 | 2 |
| lineage2.2.1.1 | 8 |
| lineage4.1.1.3 | 5 |
| lineage4.1.2.1 | 14 |
| lineage3 | 5 |
| lineage1.2.1.2.1 | 2 |
| lineage4.1.2 | 2 |
| La1.7.1 | 1 |
| lineage1.1.1 | 10 |
| lineage1.1.1.1 | 5 |
| lineage6.1.1 | 2 |
| lineage4.4.2 | 2 |
| lineage4.5 | 4 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.6.1.2 | 6 |
| lineage4.6.2.2 | 2 |
| lineage4.2.2 | 2 |
| lineage1.2.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage4.3.2 | 2 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage1.2.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.8 | 1 |
| lineage1.1.1.1;lineage2.2.1 | 1 |
| lineage1.1.3.2 | 3 |
| lineage1.2.2.2 | 4 |
| lineage2.1 | 3 |
| lineage1.1.3 | 1 |
| lineage3.1.1 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 284 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4799374 | Sensitive | lineage1.1.2 | in | SRR1144725 | Pre-XDR-TB | lineage2.2.2 | None | SRR19276639 | HR-TB | lineage4.3.3 | None | SRR6650287 | Sensitive | lineage1.1.3.1 | None | SRR1048854 | Pre-XDR-TB | lineage2.2.2 | None | SRR21277279 | Pre-XDR-TB | lineage2.2.1 | None | SRR26399842 | MDR-TB | lineage2.2.1 | None | SRR413266 | MDR-TB | lineage2.2.1 | None | ERR2653063 | Pre-XDR-TB | lineage4.4.1.1 | None | SRR2100335 | MDR-TB | lineage2.2.1 | None | SRR26400082 | Other | lineage2.2.1 | None | ERR114488 | MDR-TB | lineage2.2.1 | None | SRR26399654 | HR-TB | lineage2.2.1.1 | None | SRR6797333 | Sensitive | lineage2.2.1 | None | ERR11488922 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR29274125 | MDR-TB | lineage4.1.2.1 | None | SRR26400094 | Sensitive | lineage2.2.1 | None | ERR11138628 | MDR-TB | lineage2.2.1 | None | ERR3273136 | MDR-TB | lineage2.2.2 | None | SRR2100390 | MDR-TB | lineage2.2.1 | None | SRR20969480 | MDR-TB | lineage2.2.1 | None | SRR3742656 | Pre-XDR-TB | lineage2.2.1 | None | SRR26800484 | Sensitive | lineage3 | None | ERR751859 | Sensitive | lineage1.2.1.2.1 | th | SRR6650365 | Sensitive | lineage2.2.1 | None | ERR234115 | MDR-TB | lineage2.2.1 | cn | SRR26112424 | Sensitive | lineage1.1.3.1 | None | SRR5073777 | Sensitive | lineage2.2.1 | vn | SRR28046187 | Sensitive | lineage1.1.2 | None | SRR11662256 | MDR-TB | lineage2.2.1 | None | ERR13288998 | MDR-TB | lineage2.2.1 | None | ERR13291090 | MDR-TB | lineage2.2.2 | None | SRR29539408 | Pre-XDR-TB | lineage2.2.1 | None | SRR1723750 | Other | lineage2.2.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | ERR2184517 | Sensitive | lineage4.1.2 | pe | SRR413229 | MDR-TB | lineage2.2.1 | None | SRR6797568 | Sensitive | lineage2.2.1 | None | SRR23961498 | Other | La1.7.1 | None | ERR751803 | HR-TB | lineage1.1.1 | th | DRR261179 | Sensitive | lineage1.1.1.1 | None | SAMN02398716 | Pre-XDR-TB | lineage2.2.2 | kr | ERR4831104 | Pre-XDR-TB | lineage2.2.1 | None | ERR12328171 | Sensitive | lineage1.1.1 | None | ERR4828518 | HR-TB | lineage2.2.1 | None | ERR4828681 | Sensitive | lineage1.1.1.1 | vn | SRR29017180 | MDR-TB | lineage2.2.1 | None | ERR13249162 | HR-TB | lineage2.2.1 | None | ERR9787377 | Sensitive | lineage6.1.1 | None | SRR23310834 | HR-TB | lineage2.2.1 | None | SRR25206947 | MDR-TB | lineage4.4.2 | None | ERR13284438 | MDR-TB | lineage2.2.1 | None | ERR11488963 | Pre-XDR-TB | lineage4.1.1.3 | None | ERR8975366 | Sensitive | lineage2.2.1 | None | ERR4811211 | Sensitive | lineage2.2.1 | cn | SRR15723251 | Other | lineage2.2.1 | None | ERR8665863 | Pre-XDR-TB | lineage2.2.1 | None | ERR4810647 | HR-TB | lineage4.5 | cn | SRR22251208 | Sensitive | lineage2.2.1 | None | ERR4811071 | Sensitive | lineage2.2.1 | cn | ERR11082147 | MDR-TB | lineage2.2.1 | None | SRR29539424 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360604 | Pre-XDR-TB | lineage2.2.2 | kr | DRR188784 | HR-TB | lineage2.2.1 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR5865671 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420681 | Sensitive | lineage2.2.1 | None | SRR1368335 | Pre-XDR-TB | lineage2.2.1 | None | SRR22424878 | HR-TB | lineage1.1.2 | None | SRR27069432 | MDR-TB | lineage2.2.1 | None | SRR24673558 | Sensitive | lineage4.3.3 | None | SRR11662608 | MDR-TB | lineage2.2.1 | None | SRR6797629 | Other | lineage1.1.3.1 | None | SRR29055947 | Sensitive | lineage4.1.2.1 | None | ERR13195617 | HR-TB | lineage2.2.2 | None | SRR15014633 | MDR-TB | lineage1.1.2 | None | ERR4799896 | Sensitive | lineage1.1.2 | in | ERR6358756 | MDR-TB | lineage4.6.1.2 | None | ERR11044556 | Sensitive | lineage4.1.2.1 | None | ERR1352309 | Sensitive | lineage2.2.1 | cn | ERR8975388 | Other | lineage2.2.1 | None | SRR29050989 | HR-TB | lineage2.2.1 | None | ERR2446475 | HR-TB | lineage2.2.1 | nl | SRR29126356 | Sensitive | lineage1.1.3.1 | None | SRR19317520 | Sensitive | lineage4.1.2.1 | None | SRR5073969 | Sensitive | lineage1.1.1 | vn | SRR1368332 | Pre-XDR-TB | lineage2.2.1 | None | SRR12931748 | Sensitive | lineage4.1.2.1 | None | SRR11461657 | Sensitive | lineage4.6.2.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR413228 | MDR-TB | lineage2.2.1 | None | ERR6358723 | MDR-TB | lineage4.6.1.2 | None | ERR13284174 | Pre-XDR-TB | lineage2.2.1 | None | ERR551133_ERR551132 | MDR-TB | lineage2.2.1 | None | SRR3742670 | Pre-XDR-TB | lineage2.2.1 | None | SRR3742669 | Pre-XDR-TB | lineage2.2.1 | None | SRR13180251 | MDR-TB | lineage4.3.3 | None | SRR26399390 | HR-TB | lineage1.1.1.1 | None | ERR4829144 | Pre-XDR-TB | lineage3 | pk | SAMEA2535200 | MDR-TB | lineage2.2.1 | uz | ERR551859 | Other | lineage4.4.1.1 | de | ERR1352308 | Sensitive | lineage2.2.1 | cn | ERR13290810 | MDR-TB | lineage2.2.1 | None | SRR21277661 | Sensitive | lineage2.2.1 | None | ERR4829017 | HR-TB | lineage4.1.2.1 | None | SRR18495625 | Other | lineage2.2.1 | None | SRR15368713 | Sensitive | lineage4.2.2 | None | ERR4799218 | Pre-XDR-TB | lineage2.2.1 | in | ERR4820571 | HR-TB | lineage3 | None | ERR4195671 | Pre-XDR-TB | lineage2.2.2 | None | ERR768010 | Sensitive | lineage1.1.1 | th | ERR11252611 | Sensitive | lineage1.2.2.1 | None | ERR7911106 | MDR-TB | lineage2.2.1 | vn | SRR21277552 | Other | lineage2.2.1.1 | None | SRR26400092 | Sensitive | lineage2.2.1 | None | SRR14802082 | HR-TB | lineage2.2.1 | None | SRR3055243 | MDR-TB | lineage2.2.1 | None | SRR29273760 | MDR-TB | lineage4.1.2.1 | None | SRR3086354 | MDR-TB | lineage4.2.1 | None | SRR5065253 | Other | lineage2.2.1 | vn | SRR25514945 | Sensitive | lineage2.2.1 | None | SRR1013555 | Pre-XDR-TB | lineage2.2.2 | None | SRR28741153 | MDR-TB | lineage4.5 | None | ERR4798738 | XDR-TB | lineage2.2.1 | in | SRR29539010 | Pre-XDR-TB | lineage2.2.1 | None | SRR29093829 | Pre-XDR-TB | lineage2.2.1 | None | SRR25207155 | MDR-TB | lineage2.2.1 | None | SRR26937091 | MDR-TB | lineage2.2.1;lineage4.9 | None | ERR4011073 | Pre-XDR-TB | lineage2.2.1 | None | ERR4403838 | Sensitive | lineage2.2.1 | None | ERR7975671 | MDR-TB | lineage2.2.1 | None | SRR6982179 | Sensitive | lineage4.1.1.3 | None | SRR24083639 | Sensitive | lineage2.2.1 | None | ERR13191056 | MDR-TB | lineage2.2.2 | None | SRR25703714 | Sensitive | lineage1.1.1 | None | SRR28240083 | Sensitive | lineage4.3.3 | None | SRR14165124 | Sensitive | lineage4.1.2.1 | None | SRR6397331 | HR-TB | lineage3 | ca | SRR671781 | Pre-XDR-TB | lineage2.2.1 | cn | SRR27069417 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017705 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811064 | Sensitive | lineage4.5 | cn | ERR3802156 | Sensitive | lineage6.1.1 | None | SRR2024941 | Pre-XDR-TB | lineage2.2.1 | cn | SRR25515255 | Other | lineage2.2.1 | None | SRR413231 | MDR-TB | lineage2.2.1 | None | ERR5865672 | Pre-XDR-TB | lineage2.2.1 | None | ERR2517105 | Sensitive | lineage2.2.1 | gb | SRR6397779 | HR-TB | lineage3 | ca | SRR10808786 | Sensitive | lineage2.2.1 | None | SRR5073570 | Sensitive | lineage1.1.1.1 | vn | SRR15600344 | MDR-TB | lineage2.2.1.1 | None | ERR1035350 | MDR-TB | lineage4.3.2 | br | SRR25703716 | Sensitive | lineage1.1.1 | None | SRR2024917 | Pre-XDR-TB | lineage2.2.1 | cn | SRR16057943 | Sensitive | lineage2.2.1 | None | ERR9993126 | XDR-TB | lineage2.2.2 | None | SAMEA2533724 | MDR-TB | lineage2.2.1 | uz | SAMN02360557 | Pre-XDR-TB | lineage2.2.2 | kr | SRR413232 | HR-TB | lineage2.2.1 | None | SRR1013650 | Pre-XDR-TB | lineage2.2.2 | None | SRR6797282 | Other | lineage2.2.1 | None | SRR14801988 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | SRR16370622 | Sensitive | lineage4.1.2.1 | None | SRR14801971 | Sensitive | lineage2.2.1 | None | SRR12420542 | Sensitive | lineage2.2.1 | None | ERR13112015 | Other | lineage2.2.1 | None | ERR4811653 | Sensitive | lineage2.2.1 | cn | ERR11243579 | MDR-TB | lineage2.2.1 | None | SRR14802003 | MDR-TB | lineage2.2.1 | None | SRR5065469 | Other | lineage2.2.1.1 | vn | ERR234104 | Sensitive | lineage2.2.1 | None | SRR29096998 | Sensitive | lineage4.6.1.2 | None | SRR15014621 | RR-TB | lineage1.2.2 | None | ERR2516452 | Sensitive | lineage4.3.2 | pe | SRR21276972 | Sensitive | lineage2.2.1 | None | ERR4811007 | Sensitive | lineage4.2.2 | cn | ERR3639768 | MDR-TB | lineage2.2.1 | None | ERR4831008 | Pre-XDR-TB | lineage2.2.1.2 | np | SRR1049046 | Pre-XDR-TB | lineage2.2.2 | None | SRR1723824 | HR-TB | lineage2.2.1 | cn | SRR5073879 | Sensitive | lineage2.2.1 | vn | ERR3275584 | HR-TB | lineage2.2.1 | nl | ERR4828908 | MDR-TB | lineage4.8 | None | SRR125288 | Sensitive | lineage1.1.1.1;lineage2.2.1 | None | SRR16058486 | Sensitive | lineage1.1.2 | None | ERR9634289 | MDR-TB | lineage1.1.3.2 | None | SRR1013651 | Pre-XDR-TB | lineage2.2.2 | None | SRR12420292 | Sensitive | lineage2.2.1 | None | SRR28706491 | MDR-TB | lineage2.2.1 | None | SRR1049047 | Pre-XDR-TB | lineage2.2.2 | None | SRR29017413 | MDR-TB | lineage1.1.3.1 | None | SRR3742655 | Pre-XDR-TB | lineage2.2.1 | None | ERR11488857 | Pre-XDR-TB | lineage4.1.1.3 | None | SRR10808488 | Sensitive | lineage4.1.2 | None | SRR2100150 | Sensitive | lineage1.2.2.2 | None | SRR10040323 | MDR-TB | lineage2.2.1 | None | SRR1013556 | Pre-XDR-TB | lineage2.2.2 | None | SRR11662647 | MDR-TB | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR4797278 | Pre-XDR-TB | lineage2.2.1 | in | SRR5074136 | Sensitive | lineage2.1 | vn | ERR2515647 | RR-TB | lineage2.2.1.1 | za | ERR4818055 | HR-TB | lineage1.1.2 | gb | ERR11068141 | Sensitive | lineage1.1.2 | None | ERR13285589 | Sensitive | lineage2.2.1 | None | SRR29096532 | Sensitive | lineage4.6.1.2 | None | SRR6797408 | Sensitive | lineage1.1.3.1 | None | ERR8665712 | Pre-XDR-TB | lineage2.2.1 | None | SRR1368336 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811250 | Sensitive | lineage2.2.1 | cn | ERR4800522 | Sensitive | lineage1.1.3 | in | ERR553192_ERR553191 | MDR-TB | lineage2.2.1 | None | ERR9121602 | Sensitive | lineage4.1.2.1 | None | ERR7737870 | MDR-TB | lineage3.1.1 | None | SRR2100692 | Sensitive | lineage1.1.2 | None | ERR11043074 | Pre-XDR-TB | lineage2.2.1 | None | SRR1368334 | Pre-XDR-TB | lineage2.2.1 | None | ERR11044637 | Sensitive | lineage4.6.2.2 | None | ERR11083022 | Sensitive | lineage4.1.2.1 | None | SRR14164409 | Sensitive | lineage4.1.2.1 | None | ERR8665713 | Pre-XDR-TB | lineage2.2.1 | None | SRR28351189 | MDR-TB | lineage2.2.1 | None | ERR11775519 | RR-TB | lineage2.2.1 | None | SRR28393862 | Sensitive | lineage4 | None | SRR30182565 | Other | lineage1.1.1 | None | SRR21031693 | MDR-TB | lineage2.2.1 | None | ERR13296459 | HR-TB | lineage2.2.2 | None | SRR28859634 | Sensitive | lineage2.2.1 | None | ERR123908 | Sensitive | lineage1.2.2.2 | None | SRR20969360 | MDR-TB | lineage2.2.1.1 | None | SRR18213906 | Sensitive | lineage1.1.2 | None | SRR21576614 | MDR-TB | lineage4.5 | None | SRR15723257 | Sensitive | lineage2.2.1 | None | ERR3639804 | Pre-XDR-TB | lineage2.2.1 | None | SRR1368333 | Pre-XDR-TB | lineage2.2.1 | None | ERR4820976 | Sensitive | lineage2.2.1 | gb | ERR6866435 | Sensitive | lineage4.1.2.1 | None | SRR14165133 | Sensitive | lineage4.1.2.1 | None | ERR13266967 | Sensitive | lineage1.1.3.1 | None | ERR752079 | Sensitive | lineage1.1.1 | th | DRR130062 | RR-TB | lineage2.2.1 | None | ERR7737865 | MDR-TB | lineage2.2.1 | None | SRR25703713 | Sensitive | lineage1.1.1 | None | ERR230067 | Sensitive | lineage1.1.2 | None | ERR2517301 | HR-TB | lineage2.2.1 | nl | SRR28351613 | MDR-TB | lineage2.2.1;lineage4 | None | SRR15316410 | HR-TB | lineage2.2.1 | None | ERR212136 | Sensitive | lineage1.1.3.2 | mw | ERR6358836 | Sensitive | lineage4.6.1.1 | None | SRR6650318 | Sensitive | lineage2.2.1 | None | ERR551133 | MDR-TB | lineage2.2.1 | None | ERR4797142 | Sensitive | lineage1.2.2.2 | in | ERR13258443 | RR-TB | lineage2.2.1 | None | ERR1352307 | Sensitive | lineage2.2.1 | cn | DRR473910 | Sensitive | lineage1.2.1.2.1 | None | SRR20969948 | Sensitive | lineage2.2.1 | None | SRR25206919 | MDR-TB | lineage2.2.1 | None | ERR551740 | MDR-TB | lineage2.2.1 | None | ERR4811300 | MDR-TB | lineage4.4.2 | cn | ERR9286150 | Sensitive | lineage4.6.1.2 | None | ERR3273162 | MDR-TB | lineage1.1.3.2 | None | SRR2101500 | Sensitive | lineage4.1.1.3 | None | SRR15316530 | Sensitive | lineage2.2.1 | None | ERR9125849 | Sensitive | lineage1.1.2 | None | SRR10808754 | Sensitive | lineage1.2.2.2 | None | ERR6358933 | MDR-TB | lineage4.6.1.2 | None | SRR28044301 | Sensitive | lineage1.1.2 | None | SRR11715720 | Pre-XDR-TB | lineage2.1 | None | SRR21576699 | Pre-XDR-TB | lineage2.2.1 | None | SRR12420362 | Pre-XDR-TB | lineage2.2.1 | None | SRR6257047 | Pre-XDR-TB | lineage2.2.1 | None | ERR538432 | Sensitive | lineage2.1 | None | SRR25703771 | Sensitive | lineage1.1.1 | None | SRR15600397 | MDR-TB | lineage2.2.1.1 | None | SRR20969788 | HR-TB | lineage2.2.1 | None | SRR21689924 | Sensitive | lineage2.2.1 | None | SRR12882457 | Sensitive | lineage1.1.2 | None | ERR7737806 | MDR-TB | lineage4.2.2.2 | None | ERR9125826 | Sensitive | lineage2.2.1 | None | SRR10869115 | Sensitive | lineage2.2.1.1 | None | ERR1352310 | Sensitive | lineage2.2.1 | cn | ERR718288 | HR-TB | lineage1.1 | th | SRR3085262 | MDR-TB | lineage4.2.1 | None |
|---|
