Rv3261 - c.-171A>G
Drug resistance types
86 Sensitive
3 RR-TB
19 HR-TB
46 MDR-TB
36 Pre-XDR-TB
1 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 87 |
| lineage1.1.1 | 4 |
| lineage4;lineage2.2.1 | 1 |
| lineage4.3.2 | 2 |
| lineage2.2.1.1 | 7 |
| lineage3 | 4 |
| lineage4.4.1.1 | 2 |
| lineage4.1.2.1 | 11 |
| lineage2.2 | 2 |
| lineage1.1.1.1 | 3 |
| lineage4.8 | 1 |
| lineage1.1.3.1 | 5 |
| lineage4.1.1.3 | 2 |
| lineage4.6.2.2 | 2 |
| lineage1.2.2.2 | 5 |
| lineage2.2.2 | 14 |
| lineage1.1.3.2 | 3 |
| lineage6.1.1 | 2 |
| lineage1.1.2 | 12 |
| lineage4.5 | 3 |
| lineage4.2.2 | 2 |
| lineage1.1.3 | 1 |
| lineage2.1 | 3 |
| lineage4.4.2 | 1 |
| lineage4.6.1.2 | 4 |
| lineage4.6.1.1 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage1.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage3.1.1 | 1 |
| lineage4.1.2 | 4 |
| 1 | |
| lineage4.3.3 | 2 |
| lineage2.2.1;lineage1.1.1.1 | 1 |
| lineage4.3.3;lineage2.2.1 | 1 |
| lineage1 | 1 |
| lineage4.2.1 | 2 |
| lineage2.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 201 |
Geographic prevalence
Country level data for this variant is available for 59 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR413228 | MDR-TB | lineage2.2.1 | None | SRR5073969 | Sensitive | lineage1.1.1 | vn | SRR413227 | HR-TB | lineage4;lineage2.2.1 | None | SRR5065253 | Other | lineage2.2.1 | vn | SRR413232 | MDR-TB | lineage2.2.1 | None | SRR413231 | MDR-TB | lineage2.2.1 | None | SRR5073777 | Sensitive | lineage2.2.1 | vn | SRR413229 | MDR-TB | lineage2.2.1 | None | SRR413266 | MDR-TB | lineage2.2.1 | None | SRR2024941 | Pre-XDR-TB | lineage2.2.1 | cn | ERR2517301 | HR-TB | lineage2.2.1 | nl | ERR2516452 | Sensitive | lineage4.3.2 | pe | ERR2515647 | RR-TB | lineage2.2.1.1 | za | ERR4820571 | HR-TB | lineage3 | None | ERR2653063 | Pre-XDR-TB | lineage4.4.1.1 | None | ERR4820976 | Sensitive | lineage2.2.1 | gb | ERR2517105 | Sensitive | lineage2.2.1 | gb | ERR4829017 | HR-TB | lineage4.1.2.1 | None | SRR23310834 | MDR-TB | lineage2.2 | None | ERR551859 | Other | lineage4.4.1.1 | de | ERR1352310 | Sensitive | lineage2.2.1 | cn | ERR4828681 | Sensitive | lineage1.1.1.1 | vn | ERR4829144 | Pre-XDR-TB | lineage3 | pk | ERR4828518 | HR-TB | lineage2.2.1 | None | ERR4828908 | MDR-TB | lineage4.8 | None | SRR6397331 | HR-TB | lineage3 | ca | SRR2024917 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6397779 | HR-TB | lineage3 | ca | SRR6484870 | Sensitive | lineage2.2 | None | SRR6650318 | Sensitive | lineage2.2.1 | None | SRR6650287 | Sensitive | lineage1.1.3.1 | None | ERR1352308 | Sensitive | lineage2.2.1 | cn | SRR6257047 | Pre-XDR-TB | lineage2.2.1 | None | SRR671781 | Pre-XDR-TB | lineage2.2.1 | cn | SRR6831843 | MDR-TB | lineage2.2.1 | None | ERR4831104 | Pre-XDR-TB | lineage2.2.1 | None | SRR6797333 | Sensitive | lineage2.2.1 | None | SRR6982179 | Sensitive | lineage4.1.1.3 | None | SRR6797282 | Other | lineage2.2.1 | None | SRR6797629 | Other | lineage1.1.3.1 | None | SRR6797408 | Sensitive | lineage1.1.3.1 | None | SRR6797568 | Sensitive | lineage2.2.1 | None | ERR3275584 | HR-TB | lineage2.2.1 | nl | SAMEA2535200 | MDR-TB | lineage2.2.1 | uz | ERR11044637 | Sensitive | lineage4.6.2.2 | None | DRR130062 | RR-TB | lineage2.2.1 | None | DRR185000 | Other | lineage1.1.1.1 | None | ERR11044556 | Sensitive | lineage4.1.2.1 | None | DRR188784 | HR-TB | lineage2.2.1 | None | ERR1035350 | MDR-TB | lineage4.3.2 | br | ERR11043074 | Pre-XDR-TB | lineage2.2.1 | None | ERR114488 | MDR-TB | lineage2.2.1 | None | ERR123908 | Sensitive | lineage1.2.2.2 | None | ERR4195554 | Sensitive | lineage4.1.2.1 | None | ERR3639804 | Pre-XDR-TB | lineage2.2.1 | None | ERR4011073 | Pre-XDR-TB | lineage2.2.1 | None | ERR3273136 | MDR-TB | lineage2.2.2 | None | ERR3273162 | MDR-TB | lineage1.1.3.2 | None | ERR3639768 | MDR-TB | lineage2.2.1 | None | ERR3802156 | Sensitive | lineage6.1.1 | None | ERR4195671 | Pre-XDR-TB | lineage2.2.2 | None | ERR4553450 | MDR-TB | lineage2.2.1 | None | ERR4797278 | Pre-XDR-TB | lineage2.2.1 | in | ERR4553914 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797142 | Sensitive | lineage1.2.2.2 | in | ERR4799218 | Pre-XDR-TB | lineage2.2.1 | in | ERR4798738 | XDR-TB | lineage2.2.1 | in | ERR4811071 | Sensitive | lineage2.2.1 | cn | ERR4799374 | Sensitive | lineage1.1.2 | in | ERR4810647 | HR-TB | lineage4.5 | cn | ERR4811007 | Sensitive | lineage4.2.2 | cn | ERR4811064 | Sensitive | lineage4.5 | cn | ERR4799896 | Sensitive | lineage1.1.2 | in | ERR4800522 | Sensitive | lineage1.1.3 | in | ERR4811211 | Sensitive | lineage2.2.1 | cn | ERR4811250 | Sensitive | lineage2.2.1 | cn | ERR538432 | Sensitive | lineage2.1 | None | ERR4811653 | Sensitive | lineage2.2.1 | cn | ERR4811300 | MDR-TB | lineage4.4.2 | cn | ERR5865672 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866435 | Sensitive | lineage4.1.2.1 | None | ERR5865671 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358756 | MDR-TB | lineage4.6.1.2 | None | ERR6358933 | MDR-TB | lineage4.6.1.2 | None | ERR6358723 | MDR-TB | lineage4.6.1.2 | None | ERR6358836 | Sensitive | lineage4.6.1.1 | None | ERR6866999 | Sensitive | lineage4.1.2.1 | None | ERR751859 | Sensitive | lineage1.2.1.2.1 | th | ERR718288 | HR-TB | lineage1.1 | th | ERR751803 | HR-TB | lineage1.1.1 | th | ERR752079 | Sensitive | lineage1.1.1 | th | ERR751975 | Sensitive | lineage1.2.2.2 | None | ERR8975388 | Other | lineage2.2.1 | None | ERR768010 | Sensitive | lineage1.1.1 | th | ERR7737865 | MDR-TB | lineage2.2.1 | None | ERR7911106 | MDR-TB | lineage2.2.1 | vn | ERR7975671 | MDR-TB | lineage2.2.1 | None | ERR8665712 | Pre-XDR-TB | lineage2.2.1 | None | ERR7737806 | MDR-TB | lineage4.2.2.2 | None | ERR7737870 | MDR-TB | lineage3.1.1 | None | ERR8665713 | Pre-XDR-TB | lineage2.2.1 | None | ERR8665863 | Pre-XDR-TB | lineage2.2.1 | None | ERR8975366 | Sensitive | lineage2.2.1 | None | ERR9125826 | Sensitive | lineage2.2.1 | None | ERR9121602 | Sensitive | lineage4.1.2.1 | None | ERR9286150 | Sensitive | lineage4.6.1.2 | None | ERR9125849 | Sensitive | lineage1.1.2 | None | SRR1013555 | Pre-XDR-TB | lineage2.2.2 | None | ERR9787377 | Sensitive | lineage6.1.1 | None | ERR9993126 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013556 | Pre-XDR-TB | lineage2.2.2 | None | ERR9634289 | MDR-TB | lineage1.1.3.2 | None | SRR1013650 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048854 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049046 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048855 | Pre-XDR-TB | lineage2.2.2 | None | SRR10808786 | Sensitive | lineage2.2.1 | None | SRR10808488 | Sensitive | lineage4.1.2 | None | SRR10808754 | Sensitive | lineage1.2.2.2 | None | SRR1049047 | Pre-XDR-TB | lineage2.2.2 | None | SRR11972241 | Sensitive | None | SRR10869115 | Sensitive | lineage2.2.1.1 | None | SRR11461657 | Sensitive | lineage4.6.2.2 | None | SRR11715720 | Pre-XDR-TB | lineage2.1 | None | SRR1144725 | Pre-XDR-TB | lineage2.2.2 | None | SRR12199461 | Sensitive | lineage1.1.3.1 | None | SRR12199421 | Sensitive | lineage1.1.3.1 | None | SRR13180251 | MDR-TB | lineage4.3.3 | None | SRR125288 | Sensitive | lineage2.2.1;lineage1.1.1.1 | None | SRR12882457 | Sensitive | lineage1.1.2 | None | SRR12931748 | Sensitive | lineage4.1.2.1 | None | SRR1368335 | Pre-XDR-TB | lineage2.2.1 | None | SRR14801988 | MDR-TB | lineage4.3.3;lineage2.2.1 | None | SRR14165124 | Sensitive | lineage4.1.2.1 | None | SRR14164409 | Sensitive | lineage4.1.2.1 | None | SRR14165133 | Sensitive | lineage4.1.2.1 | None | SRR14801971 | Sensitive | lineage2.2.1 | None | SRR14802003 | MDR-TB | lineage2.2.1 | None | SRR15014633 | MDR-TB | lineage1.1.2 | None | SRR14802082 | MDR-TB | lineage2.2.1 | None | SRR15014621 | RR-TB | lineage1 | None | SRR15316410 | HR-TB | lineage2.2.1 | None | SRR15316530 | Sensitive | lineage2.2.1 | None | SRR15368713 | Sensitive | lineage4.2.2 | None | SRR15600344 | MDR-TB | lineage2.2.1.1 | None | SRR15723251 | Other | lineage2.2.1 | None | SRR15600397 | MDR-TB | lineage2.2.1.1 | None | SRR16058486 | Sensitive | lineage1.1.2 | None | SRR16057943 | Sensitive | lineage2.2.1 | None | SRR15723257 | Sensitive | lineage2.2.1 | None | SRR16370622 | Sensitive | lineage4.1.2 | None | SRR18495625 | Other | lineage2.2.1 | None | SRR18213906 | Sensitive | lineage1.1.2 | None | SRR20969788 | HR-TB | lineage2.2.1 | None | SRR20969480 | MDR-TB | lineage2.2.1 | None | SRR19276639 | HR-TB | lineage4.3.3 | None | SRR19317520 | Sensitive | lineage4.1.2 | None | SRR20969360 | MDR-TB | lineage2.2.1.1 | None | SRR21277661 | Sensitive | lineage2.2.1 | None | SRR2100390 | MDR-TB | lineage2.2.1 | None | SRR2100692 | Sensitive | lineage1.1.2 | None | SRR2101500 | Sensitive | lineage4.1.1.3 | None | SRR21277279 | Pre-XDR-TB | lineage2.2.1 | None | SRR20969948 | Sensitive | lineage2.2.1 | None | SRR2100150 | Sensitive | lineage1.2.2.2 | None | SRR2100335 | MDR-TB | lineage2.2.1 | None | SRR21276972 | Sensitive | lineage2.2.1 | None | SRR21277552 | Other | lineage2.2.1.1 | None | SRR21576614 | MDR-TB | lineage4.5 | None | SRR22424878 | HR-TB | lineage1.1.2 | None | SRR21031693 | MDR-TB | lineage2.2.1 | None | ERR11083022 | Sensitive | lineage4.1.2.1 | None | ERR11243579 | MDR-TB | lineage2.2.1 | None | ERR11068141 | Sensitive | lineage1.1.2 | None | ERR11082147 | MDR-TB | lineage2.2.1 | None | ERR11138628 | MDR-TB | lineage2.2.1 | None | SRR21887765 | Pre-XDR-TB | lineage2.2.1 | None | SRR6650365 | Sensitive | lineage2.2.1 | None | SRR3085262 | MDR-TB | lineage4.2.1 | None | SRR3055243 | MDR-TB | lineage2.2.1 | None | SAMN02360604 | Pre-XDR-TB | lineage2.2.2 | kr | SRR3086354 | MDR-TB | lineage4.2.1 | None | SAMN02398716 | Pre-XDR-TB | lineage2.2.2 | kr | SAMN02360557 | Pre-XDR-TB | lineage2.2.2 | kr | ERR1352307 | Sensitive | lineage2.2.1 | cn | ERR1352309 | Sensitive | lineage2.2.1 | cn | ERR212136 | Sensitive | lineage1.1.3.2 | mw | SRR1723750 | Sensitive | lineage2.2.1 | None | ERR2446475 | HR-TB | lineage2.2.1 | nl | SAMEA2533724 | MDR-TB | lineage2.2.1 | uz | SRR1723824 | HR-TB | lineage2.2.1 | cn | ERR4831008 | Pre-XDR-TB | lineage2.2.1.2 | np | ERR2184517 | Sensitive | lineage4.1.2 | pe | SRR5065469 | Other | lineage2.2.1.1 | vn | SRR5073879 | Sensitive | lineage2.2.1 | vn | ERR234104 | Sensitive | lineage2.2.1 | None | ERR230067 | Sensitive | lineage1.1.2 | None | ERR4818055 | HR-TB | lineage1.1.2 | gb | ERR234115 | MDR-TB | lineage2.2.1 | cn | SRR5073570 | Sensitive | lineage1.1.1.1 | vn | SRR5074136 | Sensitive | lineage2.1 | vn |
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