lineage | Count |
---|---|
58 | |
lineage4 | 6 |
La3 | 1 |
lineage4.4.1.1 | 1 |
lineage4.3.3 | 1 |
lineage3.1 | 1 |
lineage2.2.1 | 2 |
lineage2 | 1 |
lineage4.1 | 1 |
lineage6.3;lineage2.2.1 | 1 |
lineage4.9 | 7 |
spoligotype | Count |
---|---|
None | 80 |
ID | Drug resistance | Lineage | Country iso2 | ERR4810741 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR736874 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736839 | Other | None | ERR736867 | HR-TB | None | SRR1172234 | Other | None | SRR1169194 | Other | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1172728 | MDR-TB | None | SRR1172857 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173118 | Other | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184381 | MDR-TB | None | SRR1184372 | MDR-TB | None | SRR1196768 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196566 | HR-TB | None | SRR1196546 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR12416824 | HR-TB | None | SRR12142341 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR14782405 | HR-TB | None | SRR19303884 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675221 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR212001 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | SRR5341302 | HR-TB | None | ERR4816656 | HR-TB | None | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR4818615 | Other | None | SRR6044790 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341333 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2693239 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6044855 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6045217 | Other | lineage4 | None | ERR3283036 | HR-TB | None | ERR294248 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR1034652 | Other | None | ERR1035157 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797046 | HR-TB | None |
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