Rv3457c - c.-113_-74delCAACCCAACCCTCGGGGGGCGCCGCCCCCCGAGTACCCCC
Drug resistance types
101 Sensitive
8 RR-TB
16 HR-TB
52 MDR-TB
6 Pre-XDR-TB
2 XDR-TB
10 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1.1 | 7 |
| lineage3 | 20 |
| lineage2.2.1 | 65 |
| lineage4.3.4.2 | 2 |
| lineage4.1.2.1 | 20 |
| lineage4.7 | 1 |
| lineage4.3.3 | 6 |
| lineage1.1.2 | 17 |
| lineage4.2.2 | 8 |
| lineage1.1.1.1 | 5 |
| lineage4 | 4 |
| lineage4.8 | 8 |
| lineage4.5 | 7 |
| lineage1.2.2.2 | 3 |
| lineage4.4.2 | 4 |
| lineage2.2.2 | 3 |
| lineage1.1.3.1 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2 | 3 |
| lineage4.6 | 1 |
| lineage4.6.1.2 | 3 |
| La1.7.1 | 1 |
| lineage4.3.2 | 3 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 195 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR13260715 | Sensitive | lineage4.1.1.1 | None | ERR3335740 | Pre-XDR-TB | lineage3 | pk | SRR25515392 | Other | lineage2.2.1 | None | SRR26112675 | Other | lineage4.3.4.2 | None | SRR2100035 | Sensitive | lineage4.1.2.1 | None | SRR2100035 | Sensitive | lineage4.1.2.1 | None | SRR2100048 | Sensitive | lineage3 | None | SRR2100048 | Sensitive | lineage3 | None | SRR2101080 | Sensitive | lineage4.7 | None | ERR2184298 | Sensitive | lineage4.3.3 | pe | ERR2512796 | Sensitive | lineage3 | gb | ERR2512796 | Sensitive | lineage3 | gb | ERR2513030 | Sensitive | lineage1.1.2 | gb | ERR2513030 | Sensitive | lineage1.1.2 | gb | ERR2514266 | Sensitive | lineage3 | gb | ERR2514266 | Sensitive | lineage3 | gb | ERR4811279 | Sensitive | lineage4.2.2 | cn | ERR4811279 | Sensitive | lineage4.2.2 | cn | ERR10225513 | Sensitive | lineage1.1.2 | None | ERR10225516 | MDR-TB | lineage1.1.2 | None | ERR10225548 | Sensitive | lineage1.1.2 | None | ERR10680015 | RR-TB | lineage4.1.2.1 | None | ERR10225552 | MDR-TB | lineage1.1.2 | None | ERR10680028 | RR-TB | lineage4.1.2.1 | None | ERR10680033 | RR-TB | lineage4.1.2.1 | None | DRR261134 | Sensitive | lineage1.1.1.1 | None | DRR261167 | Sensitive | lineage2.2.1 | None | DRR261167 | Sensitive | lineage2.2.1 | None | ERR13260420 | RR-TB | lineage4.1.2.1 | None | ERR13260403 | RR-TB | lineage4.1.2.1 | None | ERR13284678 | Sensitive | lineage4 | None | ERR13284678 | Sensitive | lineage4 | None | ERR13284788 | MDR-TB | lineage4.8 | None | ERR13284795 | MDR-TB | lineage4.8 | None | ERR13284859 | MDR-TB | lineage1.1.1.1 | None | ERR13284954 | Sensitive | lineage4.1.2.1 | None | SRR11972249 | Sensitive | lineage2.2.1 | None | SRR10828642 | MDR-TB | lineage4.5 | None | ERR4800181 | Sensitive | lineage4.3.3 | None | ERR9786879 | Sensitive | lineage4.1.2.1 | None | SRR11662283 | MDR-TB | lineage4.5 | None | SRR12416826 | MDR-TB | lineage2.2.1 | None | SRR12416826 | MDR-TB | lineage2.2.1 | None | ERR7737660 | Sensitive | lineage4.1.1.1 | None | ERR7737752 | MDR-TB | lineage2.2.1 | None | ERR8975154 | RR-TB | lineage4.1.1.1 | None | ERR8975154 | RR-TB | lineage4.1.1.1 | None | ERR9030313 | MDR-TB | lineage1.1.2 | None | ERR9030384 | MDR-TB | lineage1.1.2 | None | SRR23861847 | Sensitive | lineage4.1.2.1 | None | SRR23861998 | Sensitive | lineage4.1.2.1 | None | SRR23862035 | Other | lineage4.8 | None | SRR29016919 | MDR-TB | lineage2.2.1 | None | SRR29016895 | HR-TB | lineage2.2.1 | None | SRR29017274 | Sensitive | lineage2.2.1 | None | SRR28045276 | Sensitive | lineage1.2.2.2 | None | SRR28044962 | Sensitive | lineage3 | None | SRR28044962 | Sensitive | lineage3 | None | SRR21276941 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276941 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276942 | Pre-XDR-TB | lineage2.2.1 | None | SRR21276942 | Pre-XDR-TB | lineage2.2.1 | None | SRR29050783 | HR-TB | lineage2.2.1 | None | SRR21277333 | Sensitive | lineage4.4.2 | None | SRR29050939 | MDR-TB | lineage2.2.1 | None | SRR28498533 | Sensitive | lineage4.1.2.1 | None | SRR29051111 | HR-TB | lineage2.2.1 | None | SRR29051140 | MDR-TB | lineage2.2.1 | None | SRR29051153 | Sensitive | lineage2.2.2 | None | SRR29772821 | MDR-TB | lineage1.1.3.1 | None | SRR29772821 | MDR-TB | lineage1.1.3.1 | None | SRR25514994 | Sensitive | lineage2.2.1 | None | ERR3287356 | MDR-TB | lineage4.1.1.3 | pe | ERR2184459 | Other | lineage4.1.2.1 | pe | ERR2184526 | Sensitive | lineage4.3.3 | pe | ERR8699147 | Sensitive | lineage4.1.1.1 | None | SRR6824336 | MDR-TB | lineage4.5 | cn | DRR184607 | MDR-TB | lineage2.2.1 | vn | SRR26112712 | Sensitive | lineage2.2.2 | None | SRR25206947 | MDR-TB | lineage4.4.2 | None | ERR4811107 | Sensitive | lineage4.2.2 | cn | ERR4811107 | Sensitive | lineage4.2.2 | cn | SRR25534209 | Sensitive | lineage2.2.1 | None | ERR4810673 | Sensitive | lineage2.2.1 | cn | ERR4811300 | MDR-TB | lineage4.4.2 | cn | ERR4811300 | MDR-TB | lineage4.4.2 | cn | ERR11067809 | Sensitive | lineage2.2.2 | None | ERR11068547 | HR-TB | lineage4.1.2 | None | ERR11068589 | HR-TB | lineage4.1.2 | None | ERR11069079 | MDR-TB | lineage1.1.1.1 | None | ERR11081231 | MDR-TB | lineage4.8 | None | ERR11081248 | Sensitive | lineage4.1.2.1 | None | ERR11081743 | MDR-TB | lineage4.8 | None | ERR11081887 | MDR-TB | lineage2.2.1 | None | ERR11082935 | Sensitive | lineage4.6 | None | SRR11342652 | MDR-TB | lineage4.1.1.1 | None | SRR11349202 | MDR-TB | lineage4.1.1.1 | None | ERR3290821 | MDR-TB | lineage4.5 | None | ERR3470626 | Sensitive | lineage3 | None | ERR4178225 | Sensitive | lineage4 | None | SRR29016743 | Sensitive | lineage2.2.1 | None | SRR29016738 | MDR-TB | lineage2.2.1 | None | SRR29016746 | Sensitive | lineage2.2.1 | None | SRR29016749 | HR-TB | lineage2.2.1 | None | SRR25628607 | Sensitive | lineage2.2.1 | None | SRR25628607 | Sensitive | lineage2.2.1 | None | SRR29017089 | XDR-TB | lineage3 | None | SRR28045526 | Sensitive | lineage1.1.2 | None | SRR29017184 | XDR-TB | lineage3 | None | SRR29017309 | MDR-TB | lineage2.2.1 | None | SRR18593217 | Sensitive | lineage4.8 | None | SRR29017526 | Sensitive | lineage2.2.1 | None | SRR18548995 | Sensitive | lineage4.2.2 | None | SRR29096532 | Sensitive | lineage4.6.1.2 | None | SRR29096998 | Sensitive | lineage4.6.1.2 | None | SRR6257002 | MDR-TB | lineage4.3.3 | None | SRR26112656 | Sensitive | lineage2.2.1 | None | SRR25340803 | Sensitive | lineage3 | None | SRR6152657 | Sensitive | lineage2.2.1 | ca | SRR2101295 | Sensitive | lineage3 | None | ERR2512385 | Other | lineage3 | gb | ERR2512385 | Other | lineage3 | gb | ERR2514663 | Sensitive | lineage4.8 | gb | ERR2514663 | Sensitive | lineage4.8 | gb | ERR2512709 | Sensitive | lineage3 | gb | ERR2512709 | Sensitive | lineage3 | gb | ERR4830391 | HR-TB | lineage2.2.1 | vn | ERR4828637 | HR-TB | lineage2.2.1 | vn | ERR4828638 | HR-TB | lineage2.2.1 | vn | ERR4828314 | Sensitive | lineage2.2.1 | vn | ERR4828307 | Sensitive | lineage2.2.1 | vn | ERR4828411 | MDR-TB | lineage2.2.1 | vn | ERR4828412 | HR-TB | lineage2.2.1 | vn | ERR4828446 | MDR-TB | lineage2.2.1 | vn | ERR4828488 | MDR-TB | lineage2.2.1 | vn | ERR4828563 | MDR-TB | lineage2.2.1 | vn | ERR4828593 | MDR-TB | lineage2.2.1 | vn | ERR4831628 | MDR-TB | lineage4.1.2 | vn | ERR8975597 | Sensitive | lineage4.1.1.3 | None | ERR4810514 | Sensitive | lineage4.2.2 | cn | ERR4810672 | Sensitive | lineage2.2.1 | cn | ERR10680219 | RR-TB | lineage4.1.2.1 | None | ERR11043485 | Sensitive | lineage4.6.1.2 | None | ERR11050852 | Sensitive | lineage4.1.2.1 | None | ERR11050919 | Sensitive | lineage4.1.2.1 | None | ERR11067242 | Other | La1.7.1 | None | ERR11067325 | Sensitive | lineage4.1.2.1 | None | ERR11067697 | Sensitive | lineage4.1.2.1 | None | ERR12554882 | Sensitive | lineage1.1.2 | None | DRR261093 | Sensitive | lineage1.1.1.1 | None | DRR261093 | Sensitive | lineage1.1.1.1 | None | DRR261175 | Sensitive | lineage2.2.1 | None | DRR261175 | Sensitive | lineage2.2.1 | None | ERR13265949 | HR-TB | lineage1.2.2.2 | None | ERR13266406 | Sensitive | lineage3 | None | ERR13266406 | Sensitive | lineage3 | None | ERR13276324 | MDR-TB | lineage2.2.1 | None | ERR4827817 | Sensitive | lineage4.5 | None | ERR4828451 | Sensitive | lineage2.2.1 | None | ERR4828520 | HR-TB | lineage2.2.1 | None | ERR6865778 | Sensitive | lineage4 | None | ERR9030411 | Sensitive | lineage1.1.2 | None | ERR9030442 | MDR-TB | lineage1.1.2 | None | ERR10877883 | MDR-TB | lineage2.2.1 | None | ERR10877883 | MDR-TB | lineage2.2.1 | None | ERR9030456 | MDR-TB | lineage1.1.2 | None | ERR9030463 | MDR-TB | lineage1.1.2 | None | ERR9030490 | MDR-TB | lineage1.1.2 | None | ERR9030492 | Sensitive | lineage1.1.2 | None | ERR9030519 | MDR-TB | lineage1.1.2 | None | SRR10808340 | Sensitive | lineage4.3.3 | None | SRR10808553 | Other | lineage4.1.2.1 | None | SRR10808478 | Sensitive | lineage4.3.3 | None | ERR9119258 | HR-TB | lineage2.2.1 | None | SRR28860012 | Sensitive | lineage4.3.2 | None | SRR14164566 | Sensitive | lineage4.3.2 | None | SRR14164737 | Sensitive | lineage4.3.4.2 | None | SRR21746997 | HR-TB | lineage2.2.1 | None | SRR21746997 | HR-TB | lineage2.2.1 | None | SRR15316530 | Sensitive | lineage2.2.1 | None | SRR15368795 | Sensitive | lineage2.2.1 | None | SRR29016736 | Sensitive | lineage2.2.1 | None | SRR29017558 | Sensitive | lineage4.3.2 | None | SRR29017677 | MDR-TB | lineage1.2.2.2 | None | SRR20969744 | Pre-XDR-TB | lineage4.2.2 | None | SRR20969606 | Other | lineage2.2.1 | None | SRR20969606 | Other | lineage2.2.1 | None | SRR29050759 | Sensitive | lineage2.2.1 | None | SRR20969821 | HR-TB | lineage4.2.2 | None | SRR29050755 | MDR-TB | lineage2.2.1 | None | SRR21576642 | MDR-TB | lineage2.2.1 | None | SRR21576642 | MDR-TB | lineage2.2.1 | None | SRR21277490 | Sensitive | lineage4.5 | None | SRR21277490 | Sensitive | lineage4.5 | None | SRR29050977 | MDR-TB | lineage2.2.1 | None |
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