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SRA data
Rv3457c
- c.-173C>T
Drug resistance types
44 Sensitive
3 RR-TB
2 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.2.1
52
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
1
M.canetti;lineage4.2
1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
1
La1.6;La3;M.canetti;lineage4.2.2
1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3
1
La3;M.canetti;lineage2;lineage4.2;lineage4.3
1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7
1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
62
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR067681
MDR-TB
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9
None
ERR1035162
Other
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9
None
ERR11043405
Sensitive
lineage4.2.1
None
ERR11044598
Sensitive
lineage4.2.1
None
ERR11044672
Sensitive
lineage4.2.1
None
ERR11049460
Sensitive
lineage4.2.1
None
ERR11049788
Sensitive
lineage4.2.1
None
ERR11050196
Sensitive
lineage4.2.1
None
ERR11050436
Sensitive
lineage4.2.1
None
ERR11050711
Sensitive
lineage4.2.1
None
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