Rv3547 - c.-198_-196delCTCinsTG
Drug resistance types
0 Sensitive
1 RR-TB
10 HR-TB
1 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
7 Other
lineage Counts
| lineage | Count |
|---|---|
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 1 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| La3 | 1 |
| 2 | |
| La3;lineage2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 21 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1196583 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | SRR1184381 | MDR-TB | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR9787197 | Other | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None |
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