Rv3794 - c.2581_2583delCCCinsGG
Drug resistance types
0 Sensitive
2 RR-TB
12 HR-TB
1 MDR-TB
1 Pre-XDR-TB
1 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| 6 | |
| lineage4.9 | 5 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 6 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 3 |
| lineage2.2.1;lineage3 | 1 |
| lineage2.2.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| lineage4.1.1.3 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 7 |
| La3;M.canetti;lineage2.2.1 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;lineage4.9 | 1 |
| lineage4 | 1 |
| La3 | 1 |
| lineage4.1.1.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9786604 | Other | None | ERR234659 | HR-TB | None | SRR18213713 | HR-TB | None | SRR25827682 | Other | None | SRR3675236 | Other | None | SRR28119777 | Other | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR25827497 | XDR-TB | lineage2.2.1;lineage3 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR11465024 | Other | lineage4.1.1.3 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR9786671 | Other | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR26399973 | Other | La3;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR3675214 | Other | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR2027263 | Other | lineage4 | None | SRR26159043 | Other | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12142341 | HR-TB | lineage2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR3797070 | Other | lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None |
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