Rv3795 - p.Gly406Cys
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
0 Sensitive
0 RR-TB
14 HR-TB
152 MDR-TB
59 Pre-XDR-TB
8 XDR-TB
1 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8.1 | 12 |
| lineage4.3.3 | 28 |
| lineage2.2.1.1 | 13 |
| lineage2.2.1 | 94 |
| lineage2.2.1;lineage4.2.1 | 3 |
| lineage4.1.2.1 | 5 |
| lineage3 | 12 |
| lineage4.3.4.2 | 5 |
| lineage4.2.1 | 10 |
| lineage4.5 | 4 |
| lineage4.8 | 5 |
| lineage4.2.2.2 | 7 |
| lineage4.7 | 3 |
| lineage4.3.2 | 4 |
| lineage4.6.2.2 | 4 |
| lineage2.2.2 | 4 |
| lineage2.2.1.2 | 3 |
| lineage1.2.2.1 | 2 |
| lineage2.2.1;lineage4.3.3 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4 | 1 |
| lineage2.2.1;lineage4.2.2.2 | 1 |
| lineage4.1.2.1;lineage4.2.1 | 2 |
| lineage1.1.2 | 4 |
| lineage1.2.2.2 | 2 |
| lineage4.3 | 1 |
| lineage2.2.1;lineage3 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1.2;lineage3.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11775515 | MDR-TB | lineage4.8.1 | None | ERR4809238 | MDR-TB | lineage4.3.3 | za | ERR4831831 | MDR-TB | lineage2.2.1.1 | vn | ERR7911131 | MDR-TB | lineage2.2.1 | vn | ERR4831870 | MDR-TB | lineage2.2.1.1 | vn | ERR4831867 | MDR-TB | lineage2.2.1.1 | vn | ERR4831893 | MDR-TB | lineage2.2.1.1 | vn | SRR7657748 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR2024940 | MDR-TB | lineage2.2.1 | cn | ERR7911571 | MDR-TB | lineage2.2.1.1 | za | ERR4811284 | MDR-TB | lineage2.2.1 | cn | ERR11044531 | MDR-TB | lineage2.2.1 | None | ERR7911398 | MDR-TB | lineage2.2.1 | us | ERR4813470 | MDR-TB | lineage4.1.2.1 | pe | ERR2600585 | HR-TB | lineage4.3.3 | None | ERR5866134 | MDR-TB | lineage2.2.1 | None | ERR8976109 | MDR-TB | lineage2.2.1.1 | None | SRR3105733 | Pre-XDR-TB | lineage3 | None | ERR2516506 | MDR-TB | lineage2.2.1 | nl | ERR2516479 | MDR-TB | lineage4.1.2.1 | pe | SRR16115035 | MDR-TB | lineage4.3.4.2 | None | ERR2307591 | HR-TB | lineage2.2.1 | None | SRR16370527 | Pre-XDR-TB | lineage2.2.1 | None | SRR5152919 | Pre-XDR-TB | lineage2.2.1 | None | ERR1036292 | HR-TB | lineage2.2.1 | pt | SRR23862159 | MDR-TB | lineage2.2.1 | None | ERR11043345 | MDR-TB | lineage4.3.3 | None | SRR25827580 | MDR-TB | lineage3 | None | ERR5866342 | MDR-TB | lineage2.2.1 | None | ERR5866343 | MDR-TB | lineage2.2.1 | None | SRR29539791 | MDR-TB | lineage4.3.3 | None | ERR1213883 | HR-TB | lineage4.2.1 | de | SRR5067544 | MDR-TB | lineage2.2.1.1 | vn | ERR1213852 | HR-TB | lineage4.5 | kr | ERR11081766 | MDR-TB | lineage4.3.3 | None | ERR2516043 | MDR-TB | lineage4.8.1 | za | ERR2510764 | Pre-XDR-TB | lineage4.8 | it | ERR4798843 | XDR-TB | lineage4.2.2.2 | in | ERR4800309 | XDR-TB | lineage4.2.2.2 | in | ERR5866136 | MDR-TB | lineage2.2.1 | None | SRR11662129 | Pre-XDR-TB | lineage2.2.1 | None | SRR1167375 | MDR-TB | lineage4.8.1 | None | SRR13282527 | Pre-XDR-TB | lineage2.2.1 | None | ERR11043389 | MDR-TB | lineage4.7 | None | SRR29539259 | MDR-TB | lineage4.3.3 | None | SRR29124257 | MDR-TB | lineage4.1.2.1 | None | ERR11043834 | MDR-TB | lineage2.2.1 | None | SRR16058306 | MDR-TB | lineage2.2.1 | None | ERR11488665 | MDR-TB | lineage4.3.2 | None | ERR8774524 | MDR-TB | lineage4.6.2.2 | None | ERR3256132 | MDR-TB | lineage4.5 | ph | SRR11972394 | Pre-XDR-TB | lineage2.2.1.1 | None | SRR29539484 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081443 | MDR-TB | lineage4.3.3 | None | ERR11043605 | MDR-TB | lineage4.2.1 | None | SRR11786872 | MDR-TB | lineage2.2.1 | None | SRR25207074 | MDR-TB | lineage2.2.1 | None | SRR12420668 | MDR-TB | lineage2.2.1 | None | SRR29539207 | MDR-TB | lineage4.3.3 | None | SRR6964603 | MDR-TB | lineage3 | None | SRR28706463 | Pre-XDR-TB | lineage2.2.1 | None | SRR17657927 | HR-TB | lineage4.5 | None | ERR13284283 | MDR-TB | lineage4.3.3 | None | SRR12420731 | Pre-XDR-TB | lineage2.2.1 | None | ERR552255 | MDR-TB | lineage2.2.1 | None | SRR10040173 | MDR-TB | lineage2.2.2 | None | ERR5865757 | MDR-TB | lineage2.2.1 | None | ERR11243533 | Pre-XDR-TB | lineage2.2.1 | None | SRR29681261 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866351 | MDR-TB | lineage2.2.1 | None | ERR4423786 | MDR-TB | lineage4.6.2.2 | None | ERR11044657 | MDR-TB | lineage2.2.1 | None | SRR6964672 | Pre-XDR-TB | lineage3 | None | ERR4798983 | Pre-XDR-TB | lineage4.2.2.2 | in | SRR24255997 | MDR-TB | lineage4.3.3 | None | ERR11043313 | MDR-TB | lineage4.2.1 | None | ERR5866352 | MDR-TB | lineage2.2.1 | None | SRR12420574 | Pre-XDR-TB | lineage2.2.1 | None | ERR13266545 | Pre-XDR-TB | lineage2.2.1.2 | None | SRR8651658 | Pre-XDR-TB | lineage2.2.1 | cn | SRR11662519 | MDR-TB | lineage2.2.1 | None | SRR29772468 | MDR-TB | lineage1.2.2.1 | None | ERR067738 | MDR-TB | lineage2.2.1;lineage4.3.3 | None | ERR2510647 | Pre-XDR-TB | lineage3 | pk | SRR11662505 | MDR-TB | lineage2.2.1 | None | SAMEA2534554 | MDR-TB | lineage2.2.1 | uz | ERR5865285 | Pre-XDR-TB | lineage2.2.1 | None | ERR13284582 | MDR-TB | lineage4.3.3 | None | SRR21686600 | MDR-TB | lineage4.3.4.2 | None | SRR26399991 | MDR-TB | lineage2.2.1.1 | None | ERR13289264 | XDR-TB | lineage4.4.1.1.1 | None | SRR18715274 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866341 | MDR-TB | lineage2.2.1 | None | ERR5865758 | MDR-TB | lineage2.2.1 | None | ERR2515612 | MDR-TB | lineage4.8.1 | za | ERR9125285 | MDR-TB | lineage2.2.1 | None | SRR10397194 | MDR-TB | lineage2.2.1 | None | ERR11081224 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | SRR15723152 | MDR-TB | lineage2.2.1 | None | SRR25827819 | XDR-TB | lineage2.2.1.2 | None | SRR13120451 | MDR-TB | lineage2.2.1 | None | ERR5865974 | Pre-XDR-TB | lineage2.2.1 | None | SRR6511640 | MDR-TB | lineage4.3.2 | None | SRR29096356 | MDR-TB | lineage2.2.1.1 | None | SRR10828182 | Pre-XDR-TB | lineage2.2.1 | None | ERR552302 | MDR-TB | lineage2.2.1 | None | ERR13284073 | MDR-TB | lineage2.2.1 | None | ERR11243532 | Pre-XDR-TB | lineage2.2.1 | None | ERR5866135 | MDR-TB | lineage2.2.1 | None | SRR12416844 | Pre-XDR-TB | lineage2.2.1 | None | SRR15723157 | MDR-TB | lineage2.2.1 | None | ERR10680224 | MDR-TB | lineage4.3.3 | None | SRR1169125 | MDR-TB | lineage4.8.1 | None | SRR29273605 | HR-TB | lineage4.8 | None | ERR13284629 | MDR-TB | lineage2.2.1 | None | SRR17657968 | HR-TB | lineage4.2.1 | None | SRR7516393 | MDR-TB | lineage2.2.1 | None | ERR11081269 | MDR-TB | lineage4.7 | None | ERR11488832 | MDR-TB | lineage4.3.2 | None | ERR4827978 | MDR-TB | lineage2.2.1 | None | SRR6936634 | HR-TB | lineage4 | None | ERR5865438 | MDR-TB | lineage2.2.1 | None | ERR2510765 | Pre-XDR-TB | lineage4.8 | None | SRR29539306 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142321 | Pre-XDR-TB | lineage2.2.1 | None | ERR13292232 | MDR-TB | lineage4.3.4.2 | None | SRR14782614 | HR-TB | lineage2.2.1 | None | SRR22175219 | XDR-TB | lineage2.2.1;lineage4.2.2.2 | None | ERR4423785 | MDR-TB | lineage4.6.2.2 | None | ERR2653187 | Pre-XDR-TB | lineage4.3.3 | None | SRR6356993 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | SRR29539416 | MDR-TB | lineage2.2.1 | None | ERR13284872 | MDR-TB | lineage2.2.1;lineage4.2.1 | None | ERR13284344 | MDR-TB | lineage4.2.1 | None | SRR11662674 | MDR-TB | lineage2.2.1 | None | ERR3132078 | HR-TB | lineage4.5 | None | ERR4796689 | Pre-XDR-TB | lineage1.1.2 | in | ERR4553496 | MDR-TB | lineage1.2.2.2 | None | ERR4797019 | Pre-XDR-TB | lineage4.3 | in | ERR4799541 | Other | lineage3 | None | ERR4797703 | MDR-TB | lineage2.2.1;lineage3 | in | SRR7645921 | MDR-TB | lineage2.2.1 | None | ERR13284641 | MDR-TB | lineage4.2.1 | None | SAMN02403592 | MDR-TB | lineage4.8.1 | za | SAMN02403593 | MDR-TB | lineage4.8.1 | za | ERR13195056 | MDR-TB | lineage2.2.2 | None | ERR4813933 | MDR-TB | lineage4.1.2.1 | br | ERR4811944 | MDR-TB | lineage4.1.2.1 | pe | SRR2024919 | MDR-TB | lineage2.2.1 | cn | ERR4828852 | MDR-TB | lineage4.3.3 | None | SRR2024927 | Pre-XDR-TB | lineage2.2.1 | cn | SRR2024948 | MDR-TB | lineage2.2.1 | cn | SRR1172260 | MDR-TB | lineage4.8.1 | None | ERR2517040 | Pre-XDR-TB | lineage4.3.3 | gb | ERR2516955 | Pre-XDR-TB | lineage4.3.3 | gb | SRR5709755 | XDR-TB | lineage1.1.1 | th | SRR5709870 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709865 | Pre-XDR-TB | lineage2.2.1 | th | SRR5709902 | Pre-XDR-TB | lineage2.2.1 | th | ERR5866350 | MDR-TB | lineage2.2.1 | None | SAMN02053751 | MDR-TB | lineage4.3.3 | za | SRR5065250 | MDR-TB | lineage2.2.1 | vn | SRR20969549 | MDR-TB | lineage2.2.2 | None | SRR23310898 | HR-TB | lineage2.2.1 | None | SRR23340059 | Pre-XDR-TB | lineage4.3.3 | None | ERR11798535 | MDR-TB | lineage2.2.1 | None | SRR7131149 | Pre-XDR-TB | lineage4.8 | None | SRR11786870 | MDR-TB | lineage2.2.1 | None | SRR7069817 | MDR-TB | lineage4.3.3 | None | SRR23340035 | Pre-XDR-TB | lineage4.3.3 | None | ERR7902770 | MDR-TB | lineage1.1.2 | None | SRR25827500 | MDR-TB | lineage4.2.2.2 | None | ERR4813601 | Pre-XDR-TB | lineage2.2.1 | None | SRR11786862 | MDR-TB | lineage2.2.1 | None | ERR8773965 | MDR-TB | lineage4.3.3 | None | SRR5153602 | MDR-TB | lineage2.2.1 | None | SRR18912066 | MDR-TB | lineage4.3.4.2 | None | SRR833163 | MDR-TB | lineage4.3.3 | None | ERR5865439 | MDR-TB | lineage2.2.1 | None | SRR29772668 | MDR-TB | lineage1.2.2.1 | None | ERR13276151 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR6356970 | Pre-XDR-TB | lineage4.1.2.1;lineage4.2.1 | None | ERR13291655 | MDR-TB | lineage4.3.4.2 | None | SRR1165626 | MDR-TB | lineage4.8.1 | None | ERR5865286 | Pre-XDR-TB | lineage2.2.1 | None | SRR21887756 | Pre-XDR-TB | lineage2.2.1 | None | SRR15722960 | MDR-TB | lineage2.2.1 | None | ERR11243534 | Pre-XDR-TB | lineage2.2.1 | None | ERR13276157 | MDR-TB | lineage2.2.1 | None | SRR25827821 | Pre-XDR-TB | lineage2.2.1.2;lineage3.1.2 | None | ERR13267487 | MDR-TB | lineage3 | None | SRR6458395 | Pre-XDR-TB | lineage2.2.1 | None | SRR29017428 | MDR-TB | lineage1.2.2.2 | None | ERR13285077 | MDR-TB | lineage4.2.1 | None | SRR1169205 | MDR-TB | lineage4.8.1 | None | SRR6832514 | HR-TB | lineage4.2.1 | None | ERR10112878 | MDR-TB | lineage2.2.1.1 | None | ERR11044503 | Pre-XDR-TB | lineage4.2.2.2 | None | ERR8774522 | MDR-TB | lineage4.6.2.2 | None | SRR16087876 | MDR-TB | lineage4.3.3 | None | SRR28045567 | Pre-XDR-TB | lineage3 | None | ERR3132122 | HR-TB | lineage4.2.1 | None | SRR29539120 | MDR-TB | lineage2.2.1 | None | SRR833074 | MDR-TB | lineage4.3.3 | None | ERR13291027 | MDR-TB | lineage2.2.2 | None | ERR13284955 | MDR-TB | lineage4.7 | None | ERR2653075 | Pre-XDR-TB | lineage4.3.3 | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR16370526 | MDR-TB | lineage2.2.1 | None | SRR7516394 | MDR-TB | lineage2.2.1 | None | SRR18002960 | XDR-TB | lineage2.2.1 | None | ERR13284725 | MDR-TB | lineage4.3.3 | None | ERR552302_ERR552301 | MDR-TB | lineage2.2.1 | None | SRR6856023 | MDR-TB | lineage4.8.1 | None | ERR11069118 | MDR-TB | lineage4.2.1 | None | ERR13261174 | XDR-TB | lineage4.2.2.2 | None | ERR2510342 | Pre-XDR-TB | lineage3 | pk | ERR2510483 | MDR-TB | lineage3 | pk | ERR2510303 | Pre-XDR-TB | lineage2.2.1.1 | pk | ERR2510648 | MDR-TB | lineage3 | pk | SRR16087920 | MDR-TB | lineage4.3.3 | None | SRR10500312 | Pre-XDR-TB | lineage1.1.2 | None | SRR11662380 | MDR-TB | lineage2.2.1 | None | ERR4797356 | Pre-XDR-TB | lineage2.2.1.2 | in | ERR4799301 | MDR-TB | lineage1.1.2 | in | ERR4822393 | Pre-XDR-TB | lineage2.2.1 | kg | ERR5865440 | MDR-TB | lineage2.2.1 | None | SRR25206956 | Pre-XDR-TB | lineage2.2.1 | None | ERR10112900 | MDR-TB | lineage2.2.1.1 | None | ERR4800284 | Pre-XDR-TB | lineage3 | in | SRR8651595 | MDR-TB | lineage2.2.1 | cn | ERR2864224 | MDR-TB | lineage4.3.2 | pt | SRR1172311 | MDR-TB | lineage4.8.1 | None | SRR23862072 | MDR-TB | lineage2.2.1 | None |
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